RNA–Protein interactions for RNA: ENST00000559340.1

LDLR-210, Transcript of low density lipoprotein receptor, humanhuman

TSL 5

Gene LDLR, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-210ENST00000559340 OR13C3Q8NGS6 347 aa7.89□□□□□ -1.15
LDLR-210ENST00000559340 OR14K1Q8NGZ2 314 aa7.89□□□□□ -1.15
LDLR-210ENST00000559340 OR8S1Q8NH09 359 aa7.89□□□□□ -1.15
LDLR-210ENST00000559340 TSEN15Q8WW01 171 aaKnown RBP7.89□□□□□ -1.15
LDLR-210ENST00000559340 PP6455Q8WZ26 134 aa7.89□□□□□ -1.15
LDLR-210ENST00000559340 PIGCQ92535 297 aa7.89□□□□□ -1.15
LDLR-210ENST00000559340 PHYHIPQ92561 330 aa7.89□□□□□ -1.15
LDLR-210ENST00000559340 GHSRQ92847 366 aa7.89□□□□□ -1.15
LDLR-210ENST00000559340 LYZL4Q96KX0 146 aa7.89□□□□□ -1.15
LDLR-210ENST00000559340 OR5M11Q96RB7 305 aa7.89□□□□□ -1.15
LDLR-210ENST00000559340 VRK1Q99986 396 aaPredicted RBP7.89□□□□□ -1.15
LDLR-210ENST00000559340 MICU1Q9BPX6 476 aa7.89□□□□□ -1.15
LDLR-210ENST00000559340 SLC30A2Q9BRI3 323 aa7.89□□□□□ -1.15
LDLR-210ENST00000559340 CACNG6Q9BXT2 260 aa7.89□□□□□ -1.15
LDLR-210ENST00000559340 BARX1Q9HBU1 254 aaPredicted RBP7.89□□□□□ -1.15
LDLR-210ENST00000559340 DECR2Q9NUI1 292 aa7.89□□□□□ -1.15
LDLR-210ENST00000559340 BEX4Q9NWD9 120 aaPredicted RBP7.89□□□□□ -1.15
LDLR-210ENST00000559340 C14orf119Q9NWQ9 140 aa7.89□□□□□ -1.15
LDLR-210ENST00000559340 SLC7A11Q9UPY5 501 aa7.89□□□□□ -1.15
LDLR-210ENST00000559340 PIGLQ9Y2B2 252 aa7.89□□□□□ -1.15
LDLR-210ENST00000559340 H7C417 338 aa7.88□□□□□ -1.15
LDLR-210ENST00000559340 IFNL4K9M1U5 179 aa7.88□□□□□ -1.15
LDLR-210ENST00000559340 NRASP01111 189 aa7.88□□□□□ -1.15
LDLR-210ENST00000559340 CD8AP01732 235 aa7.88□□□□□ -1.15
LDLR-210ENST00000559340 HLA-DPB1P04440 258 aa7.88□□□□□ -1.15
LDLR-210ENST00000559340 OCM2P0CE71 109 aa7.88□□□□□ -1.15
LDLR-210ENST00000559340 OCMP0CE72 109 aaPredicted RBP7.88□□□□□ -1.15
LDLR-210ENST00000559340 PRF1P14222 555 aa7.88□□□□□ -1.15
LDLR-210ENST00000559340 TNFRSF1AP19438 455 aa7.88□□□□□ -1.15
LDLR-210ENST00000559340 PCMT1P22061 227 aa7.88□□□□□ -1.15
LDLR-210ENST00000559340 PSMB9P28065 219 aa7.88□□□□□ -1.15
LDLR-210ENST00000559340 ALDH3B1P43353 468 aa7.88□□□□□ -1.15
LDLR-210ENST00000559340 RANBP1P43487 201 aa7.88□□□□□ -1.15
LDLR-210ENST00000559340 MMP15P51511 669 aa7.88□□□□□ -1.15
LDLR-210ENST00000559340 TESK1Q15569 626 aa7.88□□□□□ -1.15
LDLR-210ENST00000559340 MSMPQ1L6U9 139 aa7.88□□□□□ -1.15
LDLR-210ENST00000559340 Q499Y3 187 aa7.88□□□□□ -1.15
LDLR-210ENST00000559340 C11orf71Q6IPW1 123 aa7.88□□□□□ -1.15
LDLR-210ENST00000559340 KRT74Q7RTS7 529 aa7.88□□□□□ -1.15
LDLR-210ENST00000559340 SERPINA12Q8IW75 414 aa7.88□□□□□ -1.15
LDLR-210ENST00000559340 ZDHHC23Q8IYP9 409 aa7.88□□□□□ -1.15
LDLR-210ENST00000559340 RDH10Q8IZV5 341 aa7.88□□□□□ -1.15
LDLR-210ENST00000559340 CELF2-AS1Q8N7Q2 184 aa7.88□□□□□ -1.15
LDLR-210ENST00000559340 ZFP41Q8N8Y5 198 aa7.88□□□□□ -1.15
LDLR-210ENST00000559340 BHLHE23Q8NDY6 225 aa7.88□□□□□ -1.15
LDLR-210ENST00000559340 OR5D14Q8NGL3 314 aa7.88□□□□□ -1.15
LDLR-210ENST00000559340 ERGIC1Q969X5 290 aa7.88□□□□□ -1.15
LDLR-210ENST00000559340 RNF166Q96A37 237 aaPredicted RBP7.88□□□□□ -1.15
LDLR-210ENST00000559340 LURAP1Q96LR2 239 aa7.88□□□□□ -1.15
LDLR-210ENST00000559340 PDCD1LG2Q9BQ51 273 aa7.88□□□□□ -1.15
LDLR-210ENST00000559340 PAPOLGQ9BWT3 736 aaKnown RBP7.88□□□□□ -1.15
LDLR-210ENST00000559340 MRPS26Q9BYN8 205 aaKnown RBP7.88□□□□□ -1.15
LDLR-210ENST00000559340 CXXC4Q9H2H0 198 aa7.88□□□□□ -1.15
LDLR-210ENST00000559340 MYOZ1Q9NP98 299 aaPredicted RBP7.88□□□□□ -1.15
LDLR-210ENST00000559340 ZNF275Q9NSD4 429 aaPredicted RBP7.88□□□□□ -1.15
LDLR-210ENST00000559340 CKLFQ9UBR5 152 aa7.88□□□□□ -1.15
LDLR-210ENST00000559340 TANC2Q9HCD6 1990 aa7.88□□□□□ -1.15
LDLR-210ENST00000559340 CRYBG3Q68DQ2 2970 aa7.87□□□□□ -1.15
LDLR-210ENST00000559340 PNMA8CA0A1B0GUJ8 204 aa7.87□□□□□ -1.15
LDLR-210ENST00000559340 C5orf63A6NC05 138 aa7.87□□□□□ -1.15
LDLR-210ENST00000559340 OR5B21A6NL26 309 aa7.87□□□□□ -1.15
LDLR-210ENST00000559340 TRIM64CA6NLI5 447 aa7.87□□□□□ -1.15
LDLR-210ENST00000559340 TMEM210A6NLX4 147 aa7.87□□□□□ -1.15
LDLR-210ENST00000559340 OVOL3O00110 214 aa7.87□□□□□ -1.15
LDLR-210ENST00000559340 CCRL2O00421 344 aa7.87□□□□□ -1.15
LDLR-210ENST00000559340 MAGEB3O15480 346 aa7.87□□□□□ -1.15
LDLR-210ENST00000559340 SPRY3O43610 288 aa7.87□□□□□ -1.15
LDLR-210ENST00000559340 ALX3O95076 343 aa7.87□□□□□ -1.15
LDLR-210ENST00000559340 LALBAP00709 142 aa7.87□□□□□ -1.15
LDLR-210ENST00000559340 CD55P08174 381 aa7.87□□□□□ -1.15
LDLR-210ENST00000559340 NAT2P11245 290 aa7.87□□□□□ -1.15
LDLR-210ENST00000559340 PAX1P15863 534 aa7.87□□□□□ -1.15
LDLR-210ENST00000559340 JUNBP17275 347 aaPredicted RBP7.87□□□□□ -1.15
LDLR-210ENST00000559340 PRKACBP22694 351 aa7.87□□□□□ -1.15
LDLR-210ENST00000559340 CA6P23280 308 aa7.87□□□□□ -1.15
LDLR-210ENST00000559340 EFNA4P52798 201 aa7.87□□□□□ -1.15
LDLR-210ENST00000559340 TNFAIP6P98066 277 aaPredicted RBP7.87□□□□□ -1.15
LDLR-210ENST00000559340 PRDX4Q13162 271 aa7.87□□□□□ -1.15
LDLR-210ENST00000559340 CNN3Q15417 329 aaKnown RBP7.87□□□□□ -1.15
LDLR-210ENST00000559340 NEDD8Q15843 81 aa7.87□□□□□ -1.15
LDLR-210ENST00000559340 TSTQ16762 297 aaKnown RBP7.87□□□□□ -1.15
LDLR-210ENST00000559340 ALKBH6Q3KRA9 238 aa7.87□□□□□ -1.15
LDLR-210ENST00000559340 SYT6Q5T7P8 510 aaPredicted RBP7.87□□□□□ -1.15
LDLR-210ENST00000559340 LIPKQ5VXJ0 399 aa7.87□□□□□ -1.15
LDLR-210ENST00000559340 XAF1Q6GPH4 301 aa7.87□□□□□ -1.15
LDLR-210ENST00000559340 MOB3CQ70IA8 216 aa7.87□□□□□ -1.15
LDLR-210ENST00000559340 UTS2BQ765I0 119 aa7.87□□□□□ -1.15
LDLR-210ENST00000559340 LRRC75A-AS1Q8N1F1 130 aa7.87□□□□□ -1.15
LDLR-210ENST00000559340 OR2Z1Q8NG97 314 aa7.87□□□□□ -1.15
LDLR-210ENST00000559340 OR5A2Q8NGI9 324 aa7.87□□□□□ -1.15
LDLR-210ENST00000559340 FGGYQ96C11 551 aa7.87□□□□□ -1.15
LDLR-210ENST00000559340 MBD6Q96DN6 1003 aa7.87□□□□□ -1.15
LDLR-210ENST00000559340 ELMOD3Q96FG2 381 aa7.87□□□□□ -1.15
LDLR-210ENST00000559340 CPNE2Q96FN4 548 aaPredicted RBP7.87□□□□□ -1.15
LDLR-210ENST00000559340 ADAT1Q9BUB4 502 aaKnown RBP7.87□□□□□ -1.15
LDLR-210ENST00000559340 RTL8AQ9BWD3 113 aa7.87□□□□□ -1.15
LDLR-210ENST00000559340 SLITRK2Q9H156 845 aa7.87□□□□□ -1.15
LDLR-210ENST00000559340 MSL2Q9HCI7 577 aa7.87□□□□□ -1.15
LDLR-210ENST00000559340 MYEF2Q9P2K5 600 aaKnown RBP7.87□□□□□ -1.15
LDLR-210ENST00000559340 IL19Q9UHD0 177 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms