RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 THEM6Q8WUY1 208 aa12.86□□□□□ -0.35
TPM1-211ENST00000558314 H1FXQ92522 213 aaKnown RBP12.86□□□□□ -0.35
TPM1-211ENST00000558314 AMELYQ99218 206 aa12.86□□□□□ -0.35
TPM1-211ENST00000558314 DGCR6LQ9BY27 220 aa12.86□□□□□ -0.35
TPM1-211ENST00000558314 MAGIXQ9H6Y5 334 aa12.86□□□□□ -0.35
TPM1-211ENST00000558314 BEX1Q9HBH7 125 aa12.86□□□□□ -0.35
TPM1-211ENST00000558314 NOX4Q9NPH5 578 aa12.86□□□□□ -0.35
TPM1-211ENST00000558314 CMC2Q9NRP2 79 aa12.86□□□□□ -0.35
TPM1-211ENST00000558314 SNTG1Q9NSN8 517 aa12.86□□□□□ -0.35
TPM1-211ENST00000558314 RHBDD3Q9Y3P4 386 aa12.86□□□□□ -0.35
TPM1-211ENST00000558314 IGHV1-69DA0A0B4J2H0 117 aa12.85□□□□□ -0.35
TPM1-211ENST00000558314 A0A0U1RQK1 487 aa12.85□□□□□ -0.35
TPM1-211ENST00000558314 DYNC1I1O14576 645 aa12.85□□□□□ -0.35
TPM1-211ENST00000558314 CDIPTO14735 213 aa12.85□□□□□ -0.35
TPM1-211ENST00000558314 PTBP3O95758 552 aaKnown RBP12.85□□□□□ -0.35
TPM1-211ENST00000558314 CST1P01037 141 aa12.85□□□□□ -0.35
TPM1-211ENST00000558314 IGHV1-69P01742 117 aa12.85□□□□□ -0.35
TPM1-211ENST00000558314 MMP9P14780 707 aa12.85□□□□□ -0.35
TPM1-211ENST00000558314 PAICSP22234 425 aaKnown RBP12.85□□□□□ -0.35
TPM1-211ENST00000558314 NAA10P41227 235 aaPredicted RBP12.85□□□□□ -0.35
TPM1-211ENST00000558314 GSK3AP49840 483 aa12.85□□□□□ -0.35
TPM1-211ENST00000558314 BPIFB3P59826 476 aa12.85□□□□□ -0.35
TPM1-211ENST00000558314 RPS7P62081 194 aaKnown RBP12.85□□□□□ -0.35
TPM1-211ENST00000558314 TRIM25Q14258 630 aaKnown RBP12.85□□□□□ -0.35
TPM1-211ENST00000558314 PDCD1Q15116 288 aa12.85□□□□□ -0.35
TPM1-211ENST00000558314 WDR38Q5JTN6 314 aa12.85□□□□□ -0.35
TPM1-211ENST00000558314 LINC01590Q5TEZ4 76 aa12.85□□□□□ -0.35
TPM1-211ENST00000558314 LCN8Q6JVE9 175 aa12.85□□□□□ -0.35
TPM1-211ENST00000558314 PLBD1Q6P4A8 553 aa12.85□□□□□ -0.35
TPM1-211ENST00000558314 OR4F5Q8NH21 305 aa12.85□□□□□ -0.35
TPM1-211ENST00000558314 CLPTM1LQ96KA5 538 aa12.85□□□□□ -0.35
TPM1-211ENST00000558314 FAM71F1Q96KD3 344 aaPredicted RBP12.85□□□□□ -0.35
TPM1-211ENST00000558314 FEVQ99581 238 aa12.85□□□□□ -0.35
TPM1-211ENST00000558314 MICU1Q9BPX6 476 aa12.85□□□□□ -0.35
TPM1-211ENST00000558314 TOR3AQ9H497 397 aa12.85□□□□□ -0.35
TPM1-211ENST00000558314 ACOXLQ9NUZ1 547 aa12.85□□□□□ -0.35
TPM1-211ENST00000558314 FAM96BQ9Y3D0 163 aa12.85□□□□□ -0.35
TPM1-211ENST00000558314 hCG_38984A0A1B0GV85 526 aa12.84□□□□□ -0.35
TPM1-211ENST00000558314 ANXA2P2A6NMY6 339 aa12.84□□□□□ -0.35
TPM1-211ENST00000558314 ZNF850A8MQ14 1090 aa12.84□□□□□ -0.35
TPM1-211ENST00000558314 PRR23D1E9PI22 279 aaPredicted RBP12.84□□□□□ -0.35
TPM1-211ENST00000558314 ACOT8O14734 319 aa12.84□□□□□ -0.35
TPM1-211ENST00000558314 TNFRSF13BO14836 293 aaPredicted RBP12.84□□□□□ -0.35
TPM1-211ENST00000558314 SELENOFO60613 162 aa12.84□□□□□ -0.35
TPM1-211ENST00000558314 FCN3O75636 299 aa12.84□□□□□ -0.35
TPM1-211ENST00000558314 GLCEO94923 617 aa12.84□□□□□ -0.35
TPM1-211ENST00000558314 IGHV4-59P01825 116 aa12.84□□□□□ -0.35
TPM1-211ENST00000558314 APOC1P02654 83 aa12.84□□□□□ -0.35
TPM1-211ENST00000558314 TFF1P04155 84 aa12.84□□□□□ -0.35
TPM1-211ENST00000558314 PRR23D2P0DMB1 279 aaPredicted RBP12.84□□□□□ -0.35
TPM1-211ENST00000558314 BRICD5Q6PL45 260 aa12.84□□□□□ -0.35
TPM1-211ENST00000558314 SHFQ7M4L6 423 aa12.84□□□□□ -0.35
TPM1-211ENST00000558314 VMO1Q7Z5L0 202 aa12.84□□□□□ -0.35
TPM1-211ENST00000558314 C11orf53Q8IXP5 236 aa12.84□□□□□ -0.35
TPM1-211ENST00000558314 TIGD4Q8IY51 512 aa12.84□□□□□ -0.35
TPM1-211ENST00000558314 TBC1D15Q8TC07 691 aa12.84□□□□□ -0.35
TPM1-211ENST00000558314 RNF133Q8WVZ7 376 aa12.84□□□□□ -0.35
TPM1-211ENST00000558314 PIGCQ92535 297 aa12.84□□□□□ -0.35
TPM1-211ENST00000558314 RPL3LQ92901 407 aaKnown RBP12.84□□□□□ -0.35
TPM1-211ENST00000558314 SPSB4Q96A44 273 aa12.84□□□□□ -0.35
TPM1-211ENST00000558314 CCT8L2Q96SF2 557 aa12.84□□□□□ -0.35
TPM1-211ENST00000558314 SIRPDQ9H106 197 aa12.84□□□□□ -0.35
TPM1-211ENST00000558314 SEMA6AQ9H2E6 1030 aa12.84□□□□□ -0.35
TPM1-211ENST00000558314 MUC13Q9H3R2 512 aa12.84□□□□□ -0.35
TPM1-211ENST00000558314 CNTD2Q9H8S5 307 aa12.84□□□□□ -0.35
TPM1-211ENST00000558314 SIRT7Q9NRC8 400 aa12.84□□□□□ -0.35
TPM1-211ENST00000558314 C1RLQ9NZP8 487 aa12.84□□□□□ -0.35
TPM1-211ENST00000558314 PDP1Q9P0J1 537 aaPredicted RBP12.84□□□□□ -0.35
TPM1-211ENST00000558314 ZNF319Q9P2F9 582 aa12.84□□□□□ -0.35
TPM1-211ENST00000558314 PRPF19Q9UMS4 504 aaKnown RBP12.84□□□□□ -0.35
TPM1-211ENST00000558314 NDUFB3O43676 98 aa12.83□□□□□ -0.36
TPM1-211ENST00000558314 E2F6O75461 281 aa12.83□□□□□ -0.36
TPM1-211ENST00000558314 ECDO95905 644 aaPredicted RBP12.83□□□□□ -0.36
TPM1-211ENST00000558314 LHBP01229 141 aa12.83□□□□□ -0.36
TPM1-211ENST00000558314 LYNP07948 512 aa12.83□□□□□ -0.36
TPM1-211ENST00000558314 RAP2AP10114 183 aa12.83□□□□□ -0.36
TPM1-211ENST00000558314 SELLP14151 372 aa12.83□□□□□ -0.36
TPM1-211ENST00000558314 CFL1P23528 166 aaKnown RBP12.83□□□□□ -0.36
TPM1-211ENST00000558314 OPRL1P41146 370 aa12.83□□□□□ -0.36
TPM1-211ENST00000558314 DLX1P56177 255 aa12.83□□□□□ -0.36
TPM1-211ENST00000558314 DEFA6Q01524 100 aa12.83□□□□□ -0.36
TPM1-211ENST00000558314 PRDX4Q13162 271 aa12.83□□□□□ -0.36
TPM1-211ENST00000558314 GINS1Q14691 196 aa12.83□□□□□ -0.36
TPM1-211ENST00000558314 TEX36Q5VZQ5 186 aa12.83□□□□□ -0.36
TPM1-211ENST00000558314 OLFML2AQ68BL7 652 aa12.83□□□□□ -0.36
TPM1-211ENST00000558314 WDR82Q6UXN9 313 aa12.83□□□□□ -0.36
TPM1-211ENST00000558314 SLC36A1Q7Z2H8 476 aa12.83□□□□□ -0.36
TPM1-211ENST00000558314 COMMD2Q86X83 199 aa12.83□□□□□ -0.36
TPM1-211ENST00000558314 CSNK2A3Q8NEV1 391 aa12.83□□□□□ -0.36
TPM1-211ENST00000558314 OR52H1Q8NGJ2 320 aa12.83□□□□□ -0.36
TPM1-211ENST00000558314 SSMEM1Q8WWF3 244 aa12.83□□□□□ -0.36
TPM1-211ENST00000558314 RTL8AQ9BWD3 113 aa12.83□□□□□ -0.36
TPM1-211ENST00000558314 CHID1Q9BWS9 393 aa12.83□□□□□ -0.36
TPM1-211ENST00000558314 SLITRK2Q9H156 845 aa12.83□□□□□ -0.36
TPM1-211ENST00000558314 RNPEPL1Q9HAU8 725 aa12.83□□□□□ -0.36
TPM1-211ENST00000558314 RPUSD1Q9UJJ7 312 aaKnown RBP12.83□□□□□ -0.36
TPM1-211ENST00000558314 NKX6-3A6NJ46 265 aa12.82□□□□□ -0.36
TPM1-211ENST00000558314 GPR137BO60478 399 aa12.82□□□□□ -0.36
TPM1-211ENST00000558314 MUC1P15941 1255 aaPredicted RBP12.82□□□□□ -0.36
TPM1-211ENST00000558314 RELBQ01201 579 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms