RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 ETV7Q9Y603 341 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 AUP1Q9Y679 476 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 HEATR1Q9H583 2144 aaKnown RBP4.43□□□□□ -1.7
RTF1-204ENST00000558117 PKD1P98161 4303 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 DNAH6Q9C0G6 4158 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 ZNF816-ZNF321PA0A0X1KG74 233 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 METTL21EPA6NDL7 271 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 SRRM4A7MD48 611 aaKnown RBP4.42□□□□□ -1.7
RTF1-204ENST00000558117 ZNF732B4DXR9 585 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 FOXE1O00358 373 aaPredicted RBP4.42□□□□□ -1.7
RTF1-204ENST00000558117 PPIHO43447 177 aaKnown RBP4.42□□□□□ -1.7
RTF1-204ENST00000558117 WBP4O75554 376 aaKnown RBP4.42□□□□□ -1.7
RTF1-204ENST00000558117 NXPH4O95158 308 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 OTCP00480 354 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 HPRP00739 348 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 IGHV2-5P01817 119 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 GSTA2P09210 222 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 PNMTP11086 282 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 TCP1P17987 556 aaKnown RBP4.42□□□□□ -1.7
RTF1-204ENST00000558117 COX5AP20674 150 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 NT5EP21589 574 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 IGHV1-2P23083 117 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 CTNNA2P26232 953 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 HSD17B2P37059 387 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 CCR4P51679 360 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 RWDD2BP57060 319 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 RAB38P57729 211 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 PJVKQ0ZLH3 352 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 GPR50Q13585 617 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 EXOSC2Q13868 293 aaKnown RBP4.42□□□□□ -1.7
RTF1-204ENST00000558117 IL18Q14116 193 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 DPYSL3Q14195 570 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 GANABQ14697 944 aaKnown RBP4.42□□□□□ -1.7
RTF1-204ENST00000558117 LINC01620Q4KN68 170 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 ANKRD22Q5VYY1 191 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 PPP1R2P3Q6NXS1 205 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 KRT222Q8N1A0 295 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 CEP112Q8N8E3 955 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 SPATA4Q8NEY3 305 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 PIGCQ92535 297 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 HGDQ93099 445 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 YIPF5Q969M3 257 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 SLC25A36Q96CQ1 311 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 C1QTNF6Q9BXI9 259 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 ELOVL3Q9HB03 270 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 MMP26Q9NRE1 261 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 CA10Q9NS85 328 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 ERVK-18Q9QC07 812 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 MIOXQ9UGB7 285 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 DKKL1Q9UK85 242 aa4.42□□□□□ -1.7
RTF1-204ENST00000558117 DIMT1Q9UNQ2 313 aaKnown RBP4.42□□□□□ -1.7
RTF1-204ENST00000558117 PCP4L1A6NKN8 68 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 MIF4GDA9UHW6 222 aaKnown RBP4.41□□□□□ -1.7
RTF1-204ENST00000558117 PGRMC1O00264 195 aaKnown RBP4.41□□□□□ -1.7
RTF1-204ENST00000558117 RP2O75695 350 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 MT-ND2P03891 347 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 CLPSP04118 112 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 MELTFP08582 738 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 KDELR1P24390 212 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 EDNRAP25101 427 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 SLC1A1P43005 524 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 ALDH3B1P43353 468 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 CDKN1BP46527 198 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 NPY2RP49146 381 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 LCN2P80188 198 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 NAAAQ02083 359 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 SLC25A11Q02978 314 aaKnown RBP4.41□□□□□ -1.7
RTF1-204ENST00000558117 EMX1Q04741 257 aaPredicted RBP4.41□□□□□ -1.7
RTF1-204ENST00000558117 CKAP4Q07065 602 aaKnown RBP4.41□□□□□ -1.7
RTF1-204ENST00000558117 MFGE8Q08431 387 aaPredicted RBP4.41□□□□□ -1.7
RTF1-204ENST00000558117 CD300CQ08708 224 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 STX4Q12846 297 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 ZNF154Q13106 437 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 MAB21L1Q13394 359 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 CEACAM7Q14002 265 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 SERTAD2Q14140 314 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 MEF2DQ14814 521 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 TRIP13Q15645 432 aaPredicted RBP4.41□□□□□ -1.7
RTF1-204ENST00000558117 NSUN5P1Q3KNT7 163 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 SEL1L2Q5TEA6 688 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 BZW1Q7L1Q6 419 aaKnown RBP4.41□□□□□ -1.7
RTF1-204ENST00000558117 C16orf62Q7Z3J2 963 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 GOLGA7Q7Z5G4 137 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 GALNT10Q86SR1 603 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 PRR22Q8IZ63 422 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 GPR137CQ8N3F9 429 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 RPP25LQ8N5L8 163 aaKnown RBP4.41□□□□□ -1.7
RTF1-204ENST00000558117 ZNF433Q8N7K0 673 aaPredicted RBP4.41□□□□□ -1.7
RTF1-204ENST00000558117 OR4F17Q8NGA8 305 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 OR10G7Q8NGN6 311 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 DOK4Q8TEW6 326 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 SKA2Q8WVK7 121 aaPredicted RBP4.41□□□□□ -1.7
RTF1-204ENST00000558117 TMEM37Q8WXS4 190 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 IFT81Q8WYA0 676 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 RDH5Q92781 318 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 MAGOHBQ96A72 148 aaKnown RBP4.41□□□□□ -1.7
RTF1-204ENST00000558117 FOPNLQ96NB1 174 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 OR4F4Q96R69 305 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 PARD6BQ9BYG5 372 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 PARLQ9H300 379 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms