RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 RPS4Y2Q8TD47 263 aa18.1■□□□□ 0.49
CASC4-204ENST00000557945 PIGCQ92535 297 aa18.1■□□□□ 0.49
CASC4-204ENST00000557945 MBD6Q96DN6 1003 aa18.1■□□□□ 0.49
CASC4-204ENST00000557945 DIRC2Q96SL1 478 aa18.1■□□□□ 0.49
CASC4-204ENST00000557945 SLC22A4Q9H015 551 aa18.1■□□□□ 0.49
CASC4-204ENST00000557945 ENPP5Q9UJA9 477 aa18.1■□□□□ 0.49
CASC4-204ENST00000557945 NOTCH2Q04721 2471 aa18.1■□□□□ 0.49
CASC4-204ENST00000557945 ZNF816-ZNF321PA0A0X1KG74 233 aa18.09■□□□□ 0.49
CASC4-204ENST00000557945 A6NIN4 97 aa18.09■□□□□ 0.49
CASC4-204ENST00000557945 LMX1BO60663 402 aa18.09■□□□□ 0.49
CASC4-204ENST00000557945 RPSAP08865 295 aaKnown RBP18.09■□□□□ 0.49
CASC4-204ENST00000557945 TNFSF4P23510 183 aa18.09■□□□□ 0.49
CASC4-204ENST00000557945 CCL8P80075 99 aa18.09■□□□□ 0.49
CASC4-204ENST00000557945 TNFAIP6P98066 277 aaPredicted RBP18.09■□□□□ 0.49
CASC4-204ENST00000557945 ACSM1Q08AH1 577 aa18.09■□□□□ 0.49
CASC4-204ENST00000557945 ZNF367Q7RTV3 350 aa18.09■□□□□ 0.49
CASC4-204ENST00000557945 OR13C3Q8NGS6 347 aa18.09■□□□□ 0.49
CASC4-204ENST00000557945 NEU4Q8WWR8 484 aaPredicted RBP18.09■□□□□ 0.49
CASC4-204ENST00000557945 GHSRQ92847 366 aa18.09■□□□□ 0.49
CASC4-204ENST00000557945 DVL3Q92997 716 aaPredicted RBP18.09■□□□□ 0.49
CASC4-204ENST00000557945 ITFG2Q969R8 447 aa18.09■□□□□ 0.49
CASC4-204ENST00000557945 ADAT1Q9BUB4 502 aaKnown RBP18.09■□□□□ 0.49
CASC4-204ENST00000557945 DECR2Q9NUI1 292 aa18.09■□□□□ 0.49
CASC4-204ENST00000557945 NOP16Q9Y3C1 178 aaKnown RBP18.09■□□□□ 0.49
CASC4-204ENST00000557945 ANKRD17O75179 2603 aaKnown RBP18.09■□□□□ 0.49
CASC4-204ENST00000557945 TRIM64A6NGJ6 449 aa18.08■□□□□ 0.49
CASC4-204ENST00000557945 ZNF850A8MQ14 1090 aa18.08■□□□□ 0.49
CASC4-204ENST00000557945 MLNRO43193 412 aa18.08■□□□□ 0.49
CASC4-204ENST00000557945 CST4P01036 141 aa18.08■□□□□ 0.49
CASC4-204ENST00000557945 PRDX4Q13162 271 aa18.08■□□□□ 0.49
CASC4-204ENST00000557945 Q6ZSR3 168 aa18.08■□□□□ 0.49
CASC4-204ENST00000557945 TSPAN14Q8NG11 270 aa18.08■□□□□ 0.49
CASC4-204ENST00000557945 OR51A4Q8NGJ6 313 aa18.08■□□□□ 0.49
CASC4-204ENST00000557945 TSEN15Q8WW01 171 aaKnown RBP18.08■□□□□ 0.49
CASC4-204ENST00000557945 UFD1Q92890 307 aa18.08■□□□□ 0.49
CASC4-204ENST00000557945 NR1H4Q96RI1 486 aaPredicted RBP18.08■□□□□ 0.49
CASC4-204ENST00000557945 MGLLQ99685 303 aa18.08■□□□□ 0.49
CASC4-204ENST00000557945 GSX2Q9BZM3 304 aa18.08■□□□□ 0.49
CASC4-204ENST00000557945 PPP1R3EQ9H7J1 279 aa18.08■□□□□ 0.49
CASC4-204ENST00000557945 NKIRAS2Q9NYR9 191 aa18.08■□□□□ 0.49
CASC4-204ENST00000557945 ZNF281Q9Y2X9 895 aa18.08■□□□□ 0.49
CASC4-204ENST00000557945 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.07■□□□□ 0.48
CASC4-204ENST00000557945 DHRS7CA6NNS2 312 aa18.07■□□□□ 0.48
CASC4-204ENST00000557945 F5H5P2 479 aa18.07■□□□□ 0.48
CASC4-204ENST00000557945 PLPP2O43688 288 aa18.07■□□□□ 0.48
CASC4-204ENST00000557945 GMDSO60547 372 aa18.07■□□□□ 0.48
CASC4-204ENST00000557945 LY6HO94772 140 aa18.07■□□□□ 0.48
CASC4-204ENST00000557945 IGHV4-39P01824 125 aa18.07■□□□□ 0.48
CASC4-204ENST00000557945 PAX1P15863 534 aa18.07■□□□□ 0.48
CASC4-204ENST00000557945 ZNF20P17024 532 aa18.07■□□□□ 0.48
CASC4-204ENST00000557945 EFNA4P52798 201 aa18.07■□□□□ 0.48
CASC4-204ENST00000557945 FAM209AQ5JX71 171 aa18.07■□□□□ 0.48
CASC4-204ENST00000557945 ZBTB37Q5TC79 503 aa18.07■□□□□ 0.48
CASC4-204ENST00000557945 OR8S1Q8NH09 359 aa18.07■□□□□ 0.48
CASC4-204ENST00000557945 GPR148Q8TDV2 347 aa18.07■□□□□ 0.48
CASC4-204ENST00000557945 FGGYQ96C11 551 aa18.07■□□□□ 0.48
CASC4-204ENST00000557945 EGLN1Q9GZT9 426 aa18.07■□□□□ 0.48
CASC4-204ENST00000557945 ZNF696Q9H7X3 374 aa18.07■□□□□ 0.48
CASC4-204ENST00000557945 ISYNA1Q9NPH2 558 aa18.07■□□□□ 0.48
CASC4-204ENST00000557945 DHDHQ9UQ10 334 aa18.07■□□□□ 0.48
CASC4-204ENST00000557945 MPC1Q9Y5U8 109 aa18.07■□□□□ 0.48
CASC4-204ENST00000557945 A0A087WXM4 84 aa18.06■□□□□ 0.48
CASC4-204ENST00000557945 F12P00748 615 aaPredicted RBP18.06■□□□□ 0.48
CASC4-204ENST00000557945 ADH4P08319 380 aa18.06■□□□□ 0.48
CASC4-204ENST00000557945 PCMT1P22061 227 aa18.06■□□□□ 0.48
CASC4-204ENST00000557945 MLLT11Q13015 90 aaPredicted RBP18.06■□□□□ 0.48
CASC4-204ENST00000557945 MOB3CQ70IA8 216 aa18.06■□□□□ 0.48
CASC4-204ENST00000557945 ZDHHC23Q8IYP9 409 aa18.06■□□□□ 0.48
CASC4-204ENST00000557945 RGP1Q92546 391 aaPredicted RBP18.06■□□□□ 0.48
CASC4-204ENST00000557945 FCGR1BQ92637 280 aa18.06■□□□□ 0.48
CASC4-204ENST00000557945 PGLYRP3Q96LB9 341 aa18.06■□□□□ 0.48
CASC4-204ENST00000557945 HIST1H2AAQ96QV6 131 aa18.06■□□□□ 0.48
CASC4-204ENST00000557945 SAP30LQ9HAJ7 183 aa18.06■□□□□ 0.48
CASC4-204ENST00000557945 BARX1Q9HBU1 254 aaPredicted RBP18.06■□□□□ 0.48
CASC4-204ENST00000557945 ARID1AO14497 2285 aa18.06■□□□□ 0.48
CASC4-204ENST00000557945 IGHV3-64DA0A0J9YX35 117 aa18.05■□□□□ 0.48
CASC4-204ENST00000557945 A0A1B0GWJ7 208 aa18.05■□□□□ 0.48
CASC4-204ENST00000557945 ANXA2P2A6NMY6 339 aa18.05■□□□□ 0.48
CASC4-204ENST00000557945 NCR1O76036 304 aa18.05■□□□□ 0.48
CASC4-204ENST00000557945 NRASP01111 189 aa18.05■□□□□ 0.48
CASC4-204ENST00000557945 HPXP02790 462 aa18.05■□□□□ 0.48
CASC4-204ENST00000557945 CD55P08174 381 aa18.05■□□□□ 0.48
CASC4-204ENST00000557945 PSMB9P28065 219 aa18.05■□□□□ 0.48
CASC4-204ENST00000557945 SOX2P48431 317 aa18.05■□□□□ 0.48
CASC4-204ENST00000557945 CLVS2Q5SYC1 327 aa18.05■□□□□ 0.48
CASC4-204ENST00000557945 LIPKQ5VXJ0 399 aa18.05■□□□□ 0.48
CASC4-204ENST00000557945 OR13C5Q8NGS8 318 aa18.05■□□□□ 0.48
CASC4-204ENST00000557945 ITLN1Q8WWA0 313 aa18.05■□□□□ 0.48
CASC4-204ENST00000557945 OPALINQ96PE5 141 aa18.05■□□□□ 0.48
CASC4-204ENST00000557945 OR2V2Q96R30 315 aa18.05■□□□□ 0.48
CASC4-204ENST00000557945 MICU1Q9BPX6 476 aa18.05■□□□□ 0.48
CASC4-204ENST00000557945 CXXC4Q9H2H0 198 aa18.05■□□□□ 0.48
CASC4-204ENST00000557945 ABCB9Q9NP78 766 aa18.05■□□□□ 0.48
CASC4-204ENST00000557945 GPR173Q9NS66 373 aa18.05■□□□□ 0.48
CASC4-204ENST00000557945 ZNF275Q9NSD4 429 aaPredicted RBP18.05■□□□□ 0.48
CASC4-204ENST00000557945 SSX4O60224 188 aa18.04■□□□□ 0.48
CASC4-204ENST00000557945 CD1AP06126 327 aa18.04■□□□□ 0.48
CASC4-204ENST00000557945 SRP9P49458 86 aaKnown RBP18.04■□□□□ 0.48
CASC4-204ENST00000557945 NEDD8Q15843 81 aa18.04■□□□□ 0.48
CASC4-204ENST00000557945 SPRNQ5BIV9 151 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms