RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 RPL36A-HNRNPH2H7BZ11 118 aa10.72□□□□□ -0.69
SHMT2-230ENST00000557427 SLC16A7O60669 478 aa10.72□□□□□ -0.69
SHMT2-230ENST00000557427 NCR1O76036 304 aa10.72□□□□□ -0.69
SHMT2-230ENST00000557427 OR8G3PP0DMU2 310 aa10.72□□□□□ -0.69
SHMT2-230ENST00000557427 RAB3BP20337 219 aa10.72□□□□□ -0.69
SHMT2-230ENST00000557427 PSMB10P40306 273 aa10.72□□□□□ -0.69
SHMT2-230ENST00000557427 EVX1P49640 407 aa10.72□□□□□ -0.69
SHMT2-230ENST00000557427 PSMD7P51665 324 aa10.72□□□□□ -0.69
SHMT2-230ENST00000557427 BIDP55957 195 aa10.72□□□□□ -0.69
SHMT2-230ENST00000557427 HILS1P60008 231 aa10.72□□□□□ -0.69
SHMT2-230ENST00000557427 ALKBH1Q13686 389 aaKnown RBP10.72□□□□□ -0.69
SHMT2-230ENST00000557427 MELKQ14680 651 aa10.72□□□□□ -0.69
SHMT2-230ENST00000557427 CARTPTQ16568 116 aa10.72□□□□□ -0.69
SHMT2-230ENST00000557427 ZNF544Q6NX49 715 aa10.72□□□□□ -0.69
SHMT2-230ENST00000557427 SFXN4Q6P4A7 337 aa10.72□□□□□ -0.69
SHMT2-230ENST00000557427 FDX2Q6P4F2 183 aa10.72□□□□□ -0.69
SHMT2-230ENST00000557427 SHISA2Q6UWI4 295 aa10.72□□□□□ -0.69
SHMT2-230ENST00000557427 SLC35D2Q76EJ3 337 aa10.72□□□□□ -0.69
SHMT2-230ENST00000557427 DPY19L4Q7Z388 723 aa10.72□□□□□ -0.69
SHMT2-230ENST00000557427 NR2C2APQ86WQ0 139 aa10.72□□□□□ -0.69
SHMT2-230ENST00000557427 YIPF7Q8N8F6 280 aa10.72□□□□□ -0.69
SHMT2-230ENST00000557427 ZNF454Q8N9F8 522 aa10.72□□□□□ -0.69
SHMT2-230ENST00000557427 LINC01356Q8N9X3 169 aa10.72□□□□□ -0.69
SHMT2-230ENST00000557427 POC5Q8NA72 575 aa10.72□□□□□ -0.69
SHMT2-230ENST00000557427 OR8B4Q96RC9 309 aa10.72□□□□□ -0.69
SHMT2-230ENST00000557427 B3GAT2Q9NPZ5 323 aa10.72□□□□□ -0.69
SHMT2-230ENST00000557427 COMMD3Q9UBI1 195 aa10.72□□□□□ -0.69
SHMT2-230ENST00000557427 TRIM77I1YAP6 450 aa10.71□□□□□ -0.69
SHMT2-230ENST00000557427 ZNF593O00488 134 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-230ENST00000557427 HPGDSO60760 199 aa10.71□□□□□ -0.69
SHMT2-230ENST00000557427 LILRA1O75019 489 aa10.71□□□□□ -0.69
SHMT2-230ENST00000557427 KHDRBS3O75525 346 aaKnown RBP10.71□□□□□ -0.69
SHMT2-230ENST00000557427 CTLA4P16410 223 aa10.71□□□□□ -0.69
SHMT2-230ENST00000557427 CSNK1A1P48729 337 aa10.71□□□□□ -0.69
SHMT2-230ENST00000557427 NANOS3P60323 173 aaKnown RBP10.71□□□□□ -0.69
SHMT2-230ENST00000557427 ROM1Q03395 351 aa10.71□□□□□ -0.69
SHMT2-230ENST00000557427 GLO1Q04760 184 aa10.71□□□□□ -0.69
SHMT2-230ENST00000557427 SWI5Q1ZZU3 235 aa10.71□□□□□ -0.69
SHMT2-230ENST00000557427 HSD17B12Q53GQ0 312 aa10.71□□□□□ -0.69
SHMT2-230ENST00000557427 TEX30Q5JUR7 227 aa10.71□□□□□ -0.69
SHMT2-230ENST00000557427 IDNKQ5T6J7 187 aa10.71□□□□□ -0.69
SHMT2-230ENST00000557427 FAM27D1Q5T7N8 215 aa10.71□□□□□ -0.69
SHMT2-230ENST00000557427 SLC18B1Q6NT16 456 aa10.71□□□□□ -0.69
SHMT2-230ENST00000557427 HDDC2Q7Z4H3 204 aa10.71□□□□□ -0.69
SHMT2-230ENST00000557427 ZNF554Q86TJ5 538 aa10.71□□□□□ -0.69
SHMT2-230ENST00000557427 OR8H2Q8N162 312 aa10.71□□□□□ -0.69
SHMT2-230ENST00000557427 OR13C5Q8NGS8 318 aa10.71□□□□□ -0.69
SHMT2-230ENST00000557427 THEM6Q8WUY1 208 aa10.71□□□□□ -0.69
SHMT2-230ENST00000557427 THRSPQ92748 146 aa10.71□□□□□ -0.69
SHMT2-230ENST00000557427 FBXO17Q96EF6 278 aa10.71□□□□□ -0.69
SHMT2-230ENST00000557427 BOD1Q96IK1 185 aa10.71□□□□□ -0.69
SHMT2-230ENST00000557427 MAP6Q96JE9 813 aa10.71□□□□□ -0.69
SHMT2-230ENST00000557427 PDCD1LG2Q9BQ51 273 aa10.71□□□□□ -0.69
SHMT2-230ENST00000557427 NELFAQ9H3P2 528 aa10.71□□□□□ -0.69
SHMT2-230ENST00000557427 PPP1R3EQ9H7J1 279 aa10.71□□□□□ -0.69
SHMT2-230ENST00000557427 OBP2BQ9NPH6 170 aa10.71□□□□□ -0.69
SHMT2-230ENST00000557427 POLE4Q9NR33 117 aa10.71□□□□□ -0.69
SHMT2-230ENST00000557427 MRPL22Q9NWU5 206 aaKnown RBP10.71□□□□□ -0.69
SHMT2-230ENST00000557427 ETAA1Q9NY74 926 aa10.71□□□□□ -0.69
SHMT2-230ENST00000557427 ABRACLQ9P1F3 81 aa10.71□□□□□ -0.69
SHMT2-230ENST00000557427 IKZF2Q9UKS7 526 aa10.71□□□□□ -0.69
SHMT2-230ENST00000557427 PCDHB10Q9UN67 800 aa10.71□□□□□ -0.69
SHMT2-230ENST00000557427 TRBV5-5A0A0J9YX44 114 aa10.7□□□□□ -0.7
SHMT2-230ENST00000557427 NOTOA8MTQ0 251 aa10.7□□□□□ -0.7
SHMT2-230ENST00000557427 PDCD5O14737 125 aa10.7□□□□□ -0.7
SHMT2-230ENST00000557427 HLA-DQA2P01906 255 aa10.7□□□□□ -0.7
SHMT2-230ENST00000557427 CRYAAP02489 173 aa10.7□□□□□ -0.7
SHMT2-230ENST00000557427 APOA1P02647 267 aa10.7□□□□□ -0.7
SHMT2-230ENST00000557427 CELA3BP08861 270 aa10.7□□□□□ -0.7
SHMT2-230ENST00000557427 CD79AP11912 226 aa10.7□□□□□ -0.7
SHMT2-230ENST00000557427 IL7P13232 177 aa10.7□□□□□ -0.7
SHMT2-230ENST00000557427 HOXB1P14653 301 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-230ENST00000557427 CBR1P16152 277 aa10.7□□□□□ -0.7
SHMT2-230ENST00000557427 MAPK3P27361 379 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-230ENST00000557427 APEX1P27695 318 aaKnown RBP10.7□□□□□ -0.7
SHMT2-230ENST00000557427 APOBEC3AP31941 199 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-230ENST00000557427 CCR9P51686 369 aa10.7□□□□□ -0.7
SHMT2-230ENST00000557427 PCK2Q16822 640 aa10.7□□□□□ -0.7
SHMT2-230ENST00000557427 CNIH2Q6PI25 160 aa10.7□□□□□ -0.7
SHMT2-230ENST00000557427 KCTD18Q6PI47 426 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-230ENST00000557427 VHLLQ6RSH7 139 aa10.7□□□□□ -0.7
SHMT2-230ENST00000557427 ZNF813Q6ZN06 617 aa10.7□□□□□ -0.7
SHMT2-230ENST00000557427 MDP1Q86V88 176 aa10.7□□□□□ -0.7
SHMT2-230ENST00000557427 LRRC28Q86X40 367 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-230ENST00000557427 OR2G2Q8NGZ5 317 aa10.7□□□□□ -0.7
SHMT2-230ENST00000557427 OR5AK2Q8NH90 309 aa10.7□□□□□ -0.7
SHMT2-230ENST00000557427 ZNF418Q8TF45 676 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-230ENST00000557427 OR14A2Q96R54 314 aa10.7□□□□□ -0.7
SHMT2-230ENST00000557427 ULBP2Q9BZM5 246 aa10.7□□□□□ -0.7
SHMT2-230ENST00000557427 SEC61A2Q9H9S3 476 aa10.7□□□□□ -0.7
SHMT2-230ENST00000557427 KCNG2Q9UJ96 466 aa10.7□□□□□ -0.7
SHMT2-230ENST00000557427 ZNF503-AS2A6NEH8 195 aa10.69□□□□□ -0.7
SHMT2-230ENST00000557427 TMEM212A6NML5 194 aa10.69□□□□□ -0.7
SHMT2-230ENST00000557427 OR4C45A6NMZ5 311 aa10.69□□□□□ -0.7
SHMT2-230ENST00000557427 PSMD9O00233 223 aa10.69□□□□□ -0.7
SHMT2-230ENST00000557427 RPP14O95059 124 aaKnown RBP10.69□□□□□ -0.7
SHMT2-230ENST00000557427 ZFPL1O95159 310 aa10.69□□□□□ -0.7
SHMT2-230ENST00000557427 GPANK1O95872 356 aa10.69□□□□□ -0.7
SHMT2-230ENST00000557427 HLA-HP01893 362 aa10.69□□□□□ -0.7
SHMT2-230ENST00000557427 HLA-DQB1P01920 261 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms