RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 RXFP4Q8TDU9 374 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 DNASE2BQ8WZ79 361 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 TSLPQ969D9 159 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 REEP6Q96HR9 211 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 GFM1Q96RP9 751 aaKnown RBP4.55□□□□□ -1.68
TMEM260-210ENST00000556422 KATNB1Q9BVA0 655 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 ANGPTL4Q9BY76 406 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 TMEM160Q9NX00 188 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 MED31Q9Y3C7 131 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 IRGMA1A4Y4 181 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 TMEM218A2RU14 115 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 CDRT1O95170 752 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 IGKV3-11P04433 115 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 SDC2P34741 201 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 OR1D4P47884 311 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.55□□□□□ -1.68
TMEM260-210ENST00000556422 CRMP1Q14194 572 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 MICBQ29980 383 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 PYY3Q5JQD4 70 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 ASPHD2Q6ICH7 369 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 PTCRAQ6ISU1 281 aaPredicted RBP4.55□□□□□ -1.68
TMEM260-210ENST00000556422 KCNIP4Q6PIL6 250 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 ZNF322Q6U7Q0 402 aaPredicted RBP4.55□□□□□ -1.68
TMEM260-210ENST00000556422 CBLN3Q6UW01 205 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 TMPPEQ6ZT21 453 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 LAPTM4BQ86VI4 370 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 NR2C2APQ86WQ0 139 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 PDZD9Q8IXQ8 264 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 MTURNQ8N3F0 131 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 SMIM20Q8N5G0 67 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 RFLNBQ8N5W9 214 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 ZSCAN4Q8NAM6 433 aaPredicted RBP4.55□□□□□ -1.68
TMEM260-210ENST00000556422 SPRYD4Q8WW59 207 aaPredicted RBP4.55□□□□□ -1.68
TMEM260-210ENST00000556422 WDFY2Q96P53 400 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 TNFRSF13CQ96RJ3 184 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 DUSP15Q9H1R2 295 aaPredicted RBP4.55□□□□□ -1.68
TMEM260-210ENST00000556422 MMP28Q9H239 520 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 RERGLQ9H628 205 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 ADGRL4Q9HBW9 690 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 Q9N2J8 555 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 MRM2Q9UI43 246 aaKnown RBP4.55□□□□□ -1.68
TMEM260-210ENST00000556422 LHX6Q9UPM6 363 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 PIEZO1Q92508 2521 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 IGKV1D-42A0A075B6H8 117 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 C17orf51A8MQB3 221 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 SHISA8B8ZZ34 492 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 H0Y980 276 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 ICOSLGO75144 302 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 PPP1R3DO95685 299 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 TSPAN19P0C672 248 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 GLB1P16278 677 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 RPL29P47914 159 aaKnown RBP4.54□□□□□ -1.68
TMEM260-210ENST00000556422 TDGF1P3P51864 188 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 S100A10P60903 97 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 CRYZQ08257 329 aaKnown RBP4.54□□□□□ -1.68
TMEM260-210ENST00000556422 SLC17A1Q14916 467 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 C5orf47Q569G3 176 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 TMEM91Q6ZNR0 172 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 MEPCEQ7L2J0 689 aaKnown RBP4.54□□□□□ -1.68
TMEM260-210ENST00000556422 SPEM1Q8N4L4 309 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 CLEC1AQ8NC01 280 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 DNAAF1Q8NEP3 725 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 OR52L1Q8NGH7 329 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 OR1L3Q8NH93 324 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 SMAP2Q8WU79 429 aaPredicted RBP4.54□□□□□ -1.68
TMEM260-210ENST00000556422 ZNRF4Q8WWF5 429 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 CLDN23Q96B33 292 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 THAP7Q9BT49 309 aaPredicted RBP4.54□□□□□ -1.68
TMEM260-210ENST00000556422 LRFN3Q9BTN0 628 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 NXF5Q9H1B4 397 aaKnown RBP4.54□□□□□ -1.68
TMEM260-210ENST00000556422 TMEM27Q9HBJ8 222 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 CUTCQ9NTM9 273 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 SEMA5BQ9P283 1151 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 MUTYHQ9UIF7 546 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 A0A087WUJ7 227 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 SERINC4A6NH21 518 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 TMEM150CB9EJG8 249 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 MCIDASD6RGH6 385 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 IMPA2O14732 288 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 SCGNO76038 276 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 WISP1O95388 367 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 DDAH2O95865 285 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 GYPBP06028 91 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 FOLR1P15328 257 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 CELP19835 753 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 DPP4P27487 766 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 GNRHRP30968 328 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 CSNK1A1P48729 337 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 EVX1P49640 407 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 CAV3P56539 151 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 FOXL2P58012 376 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 RPS4XP62701 263 aaKnown RBP4.54□□□□□ -1.68
TMEM260-210ENST00000556422 GLYR1Q49A26 553 aaPredicted RBP4.54□□□□□ -1.68
TMEM260-210ENST00000556422 PDLIM3Q53GG5 364 aaPredicted RBP4.54□□□□□ -1.68
TMEM260-210ENST00000556422 SLC16A9Q7RTY1 509 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 OAFQ86UD1 273 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 MS4A15Q8N5U1 240 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 BVESQ8NE79 360 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 OR5M9Q8NGP3 310 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 SLC2A12Q8TD20 617 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms