RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 C14orf119Q9NWQ9 140 aa11.74□□□□□ -0.53
CHMP4BP1-201ENST00000556017 ONECUT1Q9UBC0 465 aa11.74□□□□□ -0.53
CHMP4BP1-201ENST00000556017 DNAJB11Q9UBS4 358 aa11.74□□□□□ -0.53
CHMP4BP1-201ENST00000556017 SIGLEC9Q9Y336 463 aa11.74□□□□□ -0.53
CHMP4BP1-201ENST00000556017 NBEAL2Q6ZNJ1 2754 aa11.74□□□□□ -0.53
CHMP4BP1-201ENST00000556017 A0A1W2PRD5 423 aa11.73□□□□□ -0.53
CHMP4BP1-201ENST00000556017 A0A1W2PRF3 423 aa11.73□□□□□ -0.53
CHMP4BP1-201ENST00000556017 A0A1W2PRM7 423 aa11.73□□□□□ -0.53
CHMP4BP1-201ENST00000556017 DHRS12A0PJE2 317 aa11.73□□□□□ -0.53
CHMP4BP1-201ENST00000556017 ZNF593O00488 134 aaPredicted RBP11.73□□□□□ -0.53
CHMP4BP1-201ENST00000556017 CDIPTO14735 213 aa11.73□□□□□ -0.53
CHMP4BP1-201ENST00000556017 XRCC2O43543 280 aa11.73□□□□□ -0.53
CHMP4BP1-201ENST00000556017 CCDC22O60826 627 aa11.73□□□□□ -0.53
CHMP4BP1-201ENST00000556017 FBP1P09467 338 aa11.73□□□□□ -0.53
CHMP4BP1-201ENST00000556017 HSD17B1P14061 328 aa11.73□□□□□ -0.53
CHMP4BP1-201ENST00000556017 SAA4P35542 130 aa11.73□□□□□ -0.53
CHMP4BP1-201ENST00000556017 DDOSTP39656 456 aa11.73□□□□□ -0.53
CHMP4BP1-201ENST00000556017 ENTPD1P49961 510 aa11.73□□□□□ -0.53
CHMP4BP1-201ENST00000556017 MICBQ29980 383 aa11.73□□□□□ -0.53
CHMP4BP1-201ENST00000556017 OR4C15Q8NGM1 316 aa11.73□□□□□ -0.53
CHMP4BP1-201ENST00000556017 OR2T4Q8NH00 348 aa11.73□□□□□ -0.53
CHMP4BP1-201ENST00000556017 LRTOMTQ8WZ04 291 aa11.73□□□□□ -0.53
CHMP4BP1-201ENST00000556017 NSRP1Q9H0G5 558 aaKnown RBP11.73□□□□□ -0.53
CHMP4BP1-201ENST00000556017 OPA3Q9H6K4 179 aa11.73□□□□□ -0.53
CHMP4BP1-201ENST00000556017 CENPMQ9NSP4 180 aa11.73□□□□□ -0.53
CHMP4BP1-201ENST00000556017 RHBDD3Q9Y3P4 386 aa11.73□□□□□ -0.53
CHMP4BP1-201ENST00000556017 N6AMT1Q9Y5N5 214 aa11.73□□□□□ -0.53
CHMP4BP1-201ENST00000556017 LYVE1Q9Y5Y7 322 aa11.73□□□□□ -0.53
CHMP4BP1-201ENST00000556017 COL7A1Q02388 2944 aa11.73□□□□□ -0.53
CHMP4BP1-201ENST00000556017 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.72□□□□□ -0.53
CHMP4BP1-201ENST00000556017 ZNF878C9JN71 531 aa11.72□□□□□ -0.53
CHMP4BP1-201ENST00000556017 ARPC2O15144 300 aa11.72□□□□□ -0.53
CHMP4BP1-201ENST00000556017 GASTP01350 101 aa11.72□□□□□ -0.53
CHMP4BP1-201ENST00000556017 SPARCP09486 303 aa11.72□□□□□ -0.53
CHMP4BP1-201ENST00000556017 SPI1P17947 270 aa11.72□□□□□ -0.53
CHMP4BP1-201ENST00000556017 ACKR3P25106 362 aa11.72□□□□□ -0.53
CHMP4BP1-201ENST00000556017 DCTDP32321 178 aa11.72□□□□□ -0.53
CHMP4BP1-201ENST00000556017 TGFBR2P37173 567 aa11.72□□□□□ -0.53
CHMP4BP1-201ENST00000556017 GSK3AP49840 483 aa11.72□□□□□ -0.53
CHMP4BP1-201ENST00000556017 EFNB2P52799 333 aa11.72□□□□□ -0.53
CHMP4BP1-201ENST00000556017 SLC25A1P53007 311 aa11.72□□□□□ -0.53
CHMP4BP1-201ENST00000556017 DGUOKQ16854 277 aa11.72□□□□□ -0.53
CHMP4BP1-201ENST00000556017 FAM76BQ5HYJ3 339 aa11.72□□□□□ -0.53
CHMP4BP1-201ENST00000556017 SAMD5Q5TGI4 173 aa11.72□□□□□ -0.53
CHMP4BP1-201ENST00000556017 DHRS7BQ6IAN0 325 aaPredicted RBP11.72□□□□□ -0.53
CHMP4BP1-201ENST00000556017 ZNF788Q6ZQV5 615 aa11.72□□□□□ -0.53
CHMP4BP1-201ENST00000556017 DPY19L4Q7Z388 723 aa11.72□□□□□ -0.53
CHMP4BP1-201ENST00000556017 ANGPTL6Q8NI99 470 aa11.72□□□□□ -0.53
CHMP4BP1-201ENST00000556017 CFHR4Q92496 578 aa11.72□□□□□ -0.53
CHMP4BP1-201ENST00000556017 C12orf43Q96C57 262 aaKnown RBP11.72□□□□□ -0.53
CHMP4BP1-201ENST00000556017 REEP6Q96HR9 211 aa11.72□□□□□ -0.53
CHMP4BP1-201ENST00000556017 GAFA1Q96PS6 74 aa11.72□□□□□ -0.53
CHMP4BP1-201ENST00000556017 RAB3IPQ96QF0 476 aaPredicted RBP11.72□□□□□ -0.53
CHMP4BP1-201ENST00000556017 VNN3Q9NY84 501 aa11.72□□□□□ -0.53
CHMP4BP1-201ENST00000556017 FBLN5Q9UBX5 448 aa11.72□□□□□ -0.53
CHMP4BP1-201ENST00000556017 FAM96BQ9Y3D0 163 aa11.72□□□□□ -0.53
CHMP4BP1-201ENST00000556017 GPR37O15354 613 aa11.71□□□□□ -0.53
CHMP4BP1-201ENST00000556017 PRB2P02812 416 aaPredicted RBP11.71□□□□□ -0.53
CHMP4BP1-201ENST00000556017 FABP3P05413 133 aa11.71□□□□□ -0.53
CHMP4BP1-201ENST00000556017 PAX6P26367 422 aa11.71□□□□□ -0.53
CHMP4BP1-201ENST00000556017 FMO3P31513 532 aa11.71□□□□□ -0.53
CHMP4BP1-201ENST00000556017 CX3CR1P49238 355 aa11.71□□□□□ -0.53
CHMP4BP1-201ENST00000556017 PPP1R8Q12972 351 aaKnown RBP11.71□□□□□ -0.53
CHMP4BP1-201ENST00000556017 IKZF1Q13422 519 aa11.71□□□□□ -0.53
CHMP4BP1-201ENST00000556017 C2orf68Q2NKX9 166 aa11.71□□□□□ -0.53
CHMP4BP1-201ENST00000556017 FBLN7Q53RD9 439 aa11.71□□□□□ -0.53
CHMP4BP1-201ENST00000556017 Q6ZPA2 131 aa11.71□□□□□ -0.53
CHMP4BP1-201ENST00000556017 C1orf122Q6ZSJ8 110 aa11.71□□□□□ -0.53
CHMP4BP1-201ENST00000556017 RASSF6Q6ZTQ3 369 aa11.71□□□□□ -0.53
CHMP4BP1-201ENST00000556017 SLC36A1Q7Z2H8 476 aa11.71□□□□□ -0.53
CHMP4BP1-201ENST00000556017 GALNT4Q8N4A0 578 aa11.71□□□□□ -0.53
CHMP4BP1-201ENST00000556017 OR8S1Q8NH09 359 aa11.71□□□□□ -0.53
CHMP4BP1-201ENST00000556017 RNF133Q8WVZ7 376 aa11.71□□□□□ -0.53
CHMP4BP1-201ENST00000556017 HPSE2Q8WWQ2 592 aa11.71□□□□□ -0.53
CHMP4BP1-201ENST00000556017 ABHD6Q9BV23 337 aa11.71□□□□□ -0.53
CHMP4BP1-201ENST00000556017 SNTG1Q9NSN8 517 aa11.71□□□□□ -0.53
CHMP4BP1-201ENST00000556017 HAO2Q9NYQ3 351 aa11.71□□□□□ -0.53
CHMP4BP1-201ENST00000556017 ANKRD30BLA7E2S9 258 aa11.7□□□□□ -0.54
CHMP4BP1-201ENST00000556017 TBX1O43435 398 aa11.7□□□□□ -0.54
CHMP4BP1-201ENST00000556017 PRDX6P30041 224 aa11.7□□□□□ -0.54
CHMP4BP1-201ENST00000556017 IFNGR2P38484 337 aa11.7□□□□□ -0.54
CHMP4BP1-201ENST00000556017 OPRL1P41146 370 aa11.7□□□□□ -0.54
CHMP4BP1-201ENST00000556017 MAGEA2P43356 314 aa11.7□□□□□ -0.54
CHMP4BP1-201ENST00000556017 UBE2E1P51965 193 aa11.7□□□□□ -0.54
CHMP4BP1-201ENST00000556017 ZNF121P58317 390 aaPredicted RBP11.7□□□□□ -0.54
CHMP4BP1-201ENST00000556017 MZT1Q08AG7 82 aa11.7□□□□□ -0.54
CHMP4BP1-201ENST00000556017 BEND2Q8NDZ0 799 aa11.7□□□□□ -0.54
CHMP4BP1-201ENST00000556017 RPL3LQ92901 407 aaKnown RBP11.7□□□□□ -0.54
CHMP4BP1-201ENST00000556017 LYZL4Q96KX0 146 aa11.7□□□□□ -0.54
CHMP4BP1-201ENST00000556017 DNTTIP1Q9H147 329 aa11.7□□□□□ -0.54
CHMP4BP1-201ENST00000556017 PPA2Q9H2U2 334 aa11.7□□□□□ -0.54
CHMP4BP1-201ENST00000556017 MED20Q9H944 212 aa11.7□□□□□ -0.54
CHMP4BP1-201ENST00000556017 MAGEL2Q9UJ55 1249 aa11.7□□□□□ -0.54
CHMP4BP1-201ENST00000556017 ZNF222Q9UK12 451 aa11.7□□□□□ -0.54
CHMP4BP1-201ENST00000556017 FOXJ3Q9UPW0 622 aa11.7□□□□□ -0.54
CHMP4BP1-201ENST00000556017 DSCAML1Q8TD84 2053 aa11.7□□□□□ -0.54
CHMP4BP1-201ENST00000556017 MEIOCA2RUB1 952 aa11.69□□□□□ -0.54
CHMP4BP1-201ENST00000556017 AKR7A2O43488 359 aa11.69□□□□□ -0.54
CHMP4BP1-201ENST00000556017 NDUFB3O43676 98 aa11.69□□□□□ -0.54
CHMP4BP1-201ENST00000556017 TIPRLO75663 272 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms