RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 OPN1LWP04000 364 aa6.18□□□□□ -1.42
TDP1-213ENST00000555880 GP1BAP07359 652 aa6.18□□□□□ -1.42
TDP1-213ENST00000555880 QDPRP09417 244 aa6.18□□□□□ -1.42
TDP1-213ENST00000555880 SLC2A1P11166 492 aa6.18□□□□□ -1.42
TDP1-213ENST00000555880 CTRB1P17538 263 aa6.18□□□□□ -1.42
TDP1-213ENST00000555880 NAT1P18440 290 aa6.18□□□□□ -1.42
TDP1-213ENST00000555880 BCKDHBP21953 392 aa6.18□□□□□ -1.42
TDP1-213ENST00000555880 FPR2P25090 351 aa6.18□□□□□ -1.42
TDP1-213ENST00000555880 SFTPDP35247 375 aa6.18□□□□□ -1.42
TDP1-213ENST00000555880 NPY4RP50391 375 aa6.18□□□□□ -1.42
TDP1-213ENST00000555880 ARL6IP1Q15041 203 aa6.18□□□□□ -1.42
TDP1-213ENST00000555880 KCNMB1Q16558 191 aa6.18□□□□□ -1.42
TDP1-213ENST00000555880 PLEKHN1Q494U1 663 aaPredicted RBP6.18□□□□□ -1.42
TDP1-213ENST00000555880 CTRB2Q6GPI1 263 aa6.18□□□□□ -1.42
TDP1-213ENST00000555880 SLC25A47Q6Q0C1 308 aa6.18□□□□□ -1.42
TDP1-213ENST00000555880 UBALD2Q8IYN6 164 aa6.18□□□□□ -1.42
TDP1-213ENST00000555880 GTPBP8Q8N3Z3 284 aaPredicted RBP6.18□□□□□ -1.42
TDP1-213ENST00000555880 TMEM104Q8NE00 496 aa6.18□□□□□ -1.42
TDP1-213ENST00000555880 POC1BQ8TC44 478 aa6.18□□□□□ -1.42
TDP1-213ENST00000555880 DNASE2BQ8WZ79 361 aa6.18□□□□□ -1.42
TDP1-213ENST00000555880 MARC2Q969Z3 335 aa6.18□□□□□ -1.42
TDP1-213ENST00000555880 SPACA9Q96E40 222 aaPredicted RBP6.18□□□□□ -1.42
TDP1-213ENST00000555880 LRRC46Q96FV0 321 aa6.18□□□□□ -1.42
TDP1-213ENST00000555880 PGAM5Q96HS1 289 aa6.18□□□□□ -1.42
TDP1-213ENST00000555880 AIFM2Q9BRQ8 373 aa6.18□□□□□ -1.42
TDP1-213ENST00000555880 OR10A2Q9H208 303 aa6.18□□□□□ -1.42
TDP1-213ENST00000555880 SLC6A15Q9H2J7 730 aa6.18□□□□□ -1.42
TDP1-213ENST00000555880 BANF2Q9H503 90 aa6.18□□□□□ -1.42
TDP1-213ENST00000555880 RAB18Q9NP72 206 aa6.18□□□□□ -1.42
TDP1-213ENST00000555880 ASF1BQ9NVP2 202 aa6.18□□□□□ -1.42
TDP1-213ENST00000555880 GHRLQ9UBU3 117 aa6.18□□□□□ -1.42
TDP1-213ENST00000555880 A0A087WZY1 265 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 A0A0B4J2A0 478 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 AQP7P3A6NL99 342 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 DBX1A6NMT0 343 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 NUDT19A8MXV4 375 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 NUPL2O15504 423 aaKnown RBP6.17□□□□□ -1.42
TDP1-213ENST00000555880 SOCS1O15524 211 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 EFNA2O43921 213 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 PGAM2P15259 253 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 PNLIPP16233 465 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 CCL1P22362 96 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 ADH6P28332 368 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 SLC6A9P48067 706 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 ECH1Q13011 328 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 AIMP2Q13155 320 aaKnown RBP6.17□□□□□ -1.42
TDP1-213ENST00000555880 SGCAQ16586 387 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 TMEM176BQ3YBM2 270 aaPredicted RBP6.17□□□□□ -1.42
TDP1-213ENST00000555880 RTL6Q6ICC9 239 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 UNQ6126/PRO20091Q6UXV3 157 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 Q7L0L9 218 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 TMPRSS9Q7Z410 1059 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 PEG10Q86TG7 708 aaKnown RBP6.17□□□□□ -1.42
TDP1-213ENST00000555880 OR5AS1Q8N127 324 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 SLC38A9Q8NBW4 561 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 BPIFCQ8NFQ6 507 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 OR2M3Q8NG83 312 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 OR51T1Q8NGJ9 327 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 STOML3Q8TAV4 291 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 ARL11Q969Q4 196 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 PIK3IP1Q96FE7 263 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 WDR77Q9BQA1 342 aaPredicted RBP6.17□□□□□ -1.42
TDP1-213ENST00000555880 MESP1Q9BRJ9 268 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 DUSP23Q9BVJ7 150 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 NKX6-2Q9C056 277 aaPredicted RBP6.17□□□□□ -1.42
TDP1-213ENST00000555880 WDR13Q9H1Z4 485 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 METTL8Q9H825 291 aaKnown RBP6.17□□□□□ -1.42
TDP1-213ENST00000555880 BARX1Q9HBU1 254 aaPredicted RBP6.17□□□□□ -1.42
TDP1-213ENST00000555880 SLC39A1Q9NY26 324 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 SHPKQ9UHJ6 478 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 ANAPC10Q9UM13 185 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 MEMO1Q9Y316 297 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 SIT1Q9Y3P8 196 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 CACNA1EQ15878 2313 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 TRBV6-7A0A0A0MS04 114 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 A0A0A6YYD4 124 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 LOC102725191A0A1B0GVB3 256 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 CEACAM18A8MTB9 384 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 ATP6V1G2-DDX39BF2Z307 99 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 TRIM77I1YAP6 450 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 MFNGO00587 321 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 TOR1AO14656 332 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 TIAF1O95411 115 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 SFT2D2O95562 160 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 APOC1P02654 83 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 CYC1P08574 325 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 MSR1P21757 451 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 THBS4P35443 961 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 PTGDSP41222 190 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 CSNK1A1P48729 337 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 P2RY4P51582 365 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 CLDN17P56750 224 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 LSM6P62312 80 aaKnown RBP6.17□□□□□ -1.42
TDP1-213ENST00000555880 EIF5AP63241 154 aaKnown RBP6.17□□□□□ -1.42
TDP1-213ENST00000555880 CSNK2A1P68400 391 aaPredicted RBP6.17□□□□□ -1.42
TDP1-213ENST00000555880 NAAAQ02083 359 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 MFAP5Q13361 173 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 SLC9A3R2Q15599 337 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 HIST3H3Q16695 136 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 CHRFAM7AQ494W8 412 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms