RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 LYZL4Q96KX0 146 aa9.63□□□□□ -0.87
SHMT2-220ENST00000555634 MICU1Q9BPX6 476 aa9.63□□□□□ -0.87
SHMT2-220ENST00000555634 ADAT1Q9BUB4 502 aaKnown RBP9.63□□□□□ -0.87
SHMT2-220ENST00000555634 RTL8AQ9BWD3 113 aa9.63□□□□□ -0.87
SHMT2-220ENST00000555634 ZCCHC4Q9H5U6 513 aa9.63□□□□□ -0.87
SHMT2-220ENST00000555634 TMEM138Q9NPI0 162 aa9.63□□□□□ -0.87
SHMT2-220ENST00000555634 SNTG1Q9NSN8 517 aa9.63□□□□□ -0.87
SHMT2-220ENST00000555634 C14orf119Q9NWQ9 140 aa9.63□□□□□ -0.87
SHMT2-220ENST00000555634 PURGQ9UJV8 347 aaKnown RBP9.63□□□□□ -0.87
SHMT2-220ENST00000555634 SF3B6Q9Y3B4 125 aaKnown RBP9.63□□□□□ -0.87
SHMT2-220ENST00000555634 TRAV1-2A0A0B4J238 106 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 A0A1B0GTI1 187 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 A1L4Q6 167 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 DPPA5A6NC42 116 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 H3BMQ9 156 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 M0R233 179 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 SC5DO75845 299 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 CYB5AP00167 134 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 NRASP01111 189 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 ZNF250P15622 560 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 SRMP19623 302 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 RAB3BP20337 219 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 KITLGP21583 273 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 BDKRB2P30411 391 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 APOBEC3AP31941 199 aaPredicted RBP9.62□□□□□ -0.87
SHMT2-220ENST00000555634 SERPINF1P36955 418 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 CRYBB2P43320 205 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 CAPZA1P52907 286 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 RPS11P62280 158 aaKnown RBP eCLIP9.62□□□□□ -0.87
SHMT2-220ENST00000555634 NKX6-1P78426 367 aaPredicted RBP9.62□□□□□ -0.87
SHMT2-220ENST00000555634 DAZAP2Q15038 168 aaPredicted RBP9.62□□□□□ -0.87
SHMT2-220ENST00000555634 OR8G1Q15617 311 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 ZNF672Q499Z4 452 aaPredicted RBP9.62□□□□□ -0.87
SHMT2-220ENST00000555634 GLT8D1Q68CQ7 371 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 OR2T2Q6IF00 324 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 TMEM200AQ86VY9 491 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 OR5AS1Q8N127 324 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 SPERTQ8NA61 448 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 OR8G5Q8NG78 346 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 OR1M1Q8NGA1 313 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 OR13C9Q8NGT0 318 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 OR14K1Q8NGZ2 314 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 OR13G1Q8NGZ3 307 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 OR10AC1Q8NH08 325 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 TMEM171Q8WVE6 324 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 PIGCQ92535 297 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 PPP1R14AQ96A00 147 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 FOXRED1Q96CU9 486 aaPredicted RBP9.62□□□□□ -0.87
SHMT2-220ENST00000555634 DIRC2Q96SL1 478 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 GPER1Q99527 375 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 S100A13Q99584 98 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 DHRS9Q9BPW9 319 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 TMEM100Q9NV29 134 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 TAS2R4Q9NYW5 299 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 CISD1Q9NZ45 108 aaKnown RBP9.62□□□□□ -0.87
SHMT2-220ENST00000555634 ZNF319Q9P2F9 582 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 FLNCQ14315 2725 aa9.62□□□□□ -0.87
SHMT2-220ENST00000555634 TRBV5-7A0A0A0MS05 114 aa9.61□□□□□ -0.87
SHMT2-220ENST00000555634 A0A1W2PPK0 400 aa9.61□□□□□ -0.87
SHMT2-220ENST00000555634 OR5B21A6NL26 309 aa9.61□□□□□ -0.87
SHMT2-220ENST00000555634 DEFB108AA8MXU0 73 aa9.61□□□□□ -0.87
SHMT2-220ENST00000555634 SHISA9B4DS77 424 aa9.61□□□□□ -0.87
SHMT2-220ENST00000555634 C19orf84I3L1E1 186 aa9.61□□□□□ -0.87
SHMT2-220ENST00000555634 GMDSO60547 372 aa9.61□□□□□ -0.87
SHMT2-220ENST00000555634 TMEM127O75204 238 aa9.61□□□□□ -0.87
SHMT2-220ENST00000555634 GPX5O75715 221 aa9.61□□□□□ -0.87
SHMT2-220ENST00000555634 CST4P01036 141 aa9.61□□□□□ -0.87
SHMT2-220ENST00000555634 IL1AP01583 271 aa9.61□□□□□ -0.87
SHMT2-220ENST00000555634 IGHV3-13P01766 116 aa9.61□□□□□ -0.87
SHMT2-220ENST00000555634 OR4A8P0C604 315 aa9.61□□□□□ -0.87
SHMT2-220ENST00000555634 EVX1P49640 407 aa9.61□□□□□ -0.87
SHMT2-220ENST00000555634 ERVS71-1P61550 626 aa9.61□□□□□ -0.87
SHMT2-220ENST00000555634 VBP1P61758 197 aa9.61□□□□□ -0.87
SHMT2-220ENST00000555634 PRDX4Q13162 271 aa9.61□□□□□ -0.87
SHMT2-220ENST00000555634 CEP78Q5JTW2 689 aa9.61□□□□□ -0.87
SHMT2-220ENST00000555634 DDI2Q5TDH0 399 aa9.61□□□□□ -0.87
SHMT2-220ENST00000555634 AGAP6Q5VW22 663 aa9.61□□□□□ -0.87
SHMT2-220ENST00000555634 SLC16A12Q6ZSM3 486 aa9.61□□□□□ -0.87
SHMT2-220ENST00000555634 Q6ZSR3 168 aa9.61□□□□□ -0.87
SHMT2-220ENST00000555634 LHFPL2Q6ZUX7 228 aa9.61□□□□□ -0.87
SHMT2-220ENST00000555634 C22orf34Q6ZV56 151 aa9.61□□□□□ -0.87
SHMT2-220ENST00000555634 JAGN1Q8N5M9 183 aa9.61□□□□□ -0.87
SHMT2-220ENST00000555634 RPL3LQ92901 407 aaKnown RBP9.61□□□□□ -0.87
SHMT2-220ENST00000555634 ADAT3Q96EY9 351 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-220ENST00000555634 BORCS8Q96FH0 119 aa9.61□□□□□ -0.87
SHMT2-220ENST00000555634 SYT3Q9BQG1 590 aa9.61□□□□□ -0.87
SHMT2-220ENST00000555634 CENPOQ9BU64 300 aa9.61□□□□□ -0.87
SHMT2-220ENST00000555634 DCSTAMPQ9H295 470 aa9.61□□□□□ -0.87
SHMT2-220ENST00000555634 PLGRKTQ9HBL7 147 aa9.61□□□□□ -0.87
SHMT2-220ENST00000555634 ZDHHC8Q9ULC8 765 aa9.61□□□□□ -0.87
SHMT2-220ENST00000555634 FZR1Q9UM11 496 aa9.61□□□□□ -0.87
SHMT2-220ENST00000555634 EDARQ9UNE0 448 aa9.61□□□□□ -0.87
SHMT2-220ENST00000555634 CEPT1Q9Y6K0 416 aa9.61□□□□□ -0.87
SHMT2-220ENST00000555634 CLEC18AA5D8T8 446 aa9.6□□□□□ -0.87
SHMT2-220ENST00000555634 TMEM210A6NLX4 147 aa9.6□□□□□ -0.87
SHMT2-220ENST00000555634 ZNF850A8MQ14 1090 aa9.6□□□□□ -0.87
SHMT2-220ENST00000555634 B9A039 149 aa9.6□□□□□ -0.87
SHMT2-220ENST00000555634 HS3ST1O14792 307 aa9.6□□□□□ -0.87
SHMT2-220ENST00000555634 TPD52L2O43399 206 aaKnown RBP9.6□□□□□ -0.87
SHMT2-220ENST00000555634 CDRT1O95170 752 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms