RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 SELENOFO60613 162 aa8.93□□□□□ -0.98
SHMT2-215ENST00000554656 SLC16A7O60669 478 aa8.93□□□□□ -0.98
SHMT2-215ENST00000554656 ICMTO60725 284 aa8.93□□□□□ -0.98
SHMT2-215ENST00000554656 SULT1C4O75897 302 aa8.93□□□□□ -0.98
SHMT2-215ENST00000554656 ADH4P08319 380 aa8.93□□□□□ -0.98
SHMT2-215ENST00000554656 MRPL3P09001 348 aaKnown RBP8.93□□□□□ -0.98
SHMT2-215ENST00000554656 EGR1P18146 543 aa8.93□□□□□ -0.98
SHMT2-215ENST00000554656 LAP3P28838 519 aa8.93□□□□□ -0.98
SHMT2-215ENST00000554656 GABRA5P31644 462 aa8.93□□□□□ -0.98
SHMT2-215ENST00000554656 NAA10P41227 235 aaPredicted RBP8.93□□□□□ -0.98
SHMT2-215ENST00000554656 TGM4P49221 684 aa8.93□□□□□ -0.98
SHMT2-215ENST00000554656 PPP1CBP62140 327 aa8.93□□□□□ -0.98
SHMT2-215ENST00000554656 LCN6P62502 163 aa8.93□□□□□ -0.98
SHMT2-215ENST00000554656 EGR3Q06889 387 aa8.93□□□□□ -0.98
SHMT2-215ENST00000554656 PCK2Q16822 640 aa8.93□□□□□ -0.98
SHMT2-215ENST00000554656 TUSC1Q2TAM9 212 aa8.93□□□□□ -0.98
SHMT2-215ENST00000554656 ZNF718Q3SXZ3 478 aa8.93□□□□□ -0.98
SHMT2-215ENST00000554656 CCDC58Q4VC31 144 aa8.93□□□□□ -0.98
SHMT2-215ENST00000554656 FAM209AQ5JX71 171 aa8.93□□□□□ -0.98
SHMT2-215ENST00000554656 FAM27BQ5VT28 67 aa8.93□□□□□ -0.98
SHMT2-215ENST00000554656 DCAF12L2Q5VW00 463 aa8.93□□□□□ -0.98
SHMT2-215ENST00000554656 ZNF774Q6NX45 483 aa8.93□□□□□ -0.98
SHMT2-215ENST00000554656 LINC00299Q6ZSB3 139 aa8.93□□□□□ -0.98
SHMT2-215ENST00000554656 VASH1Q7L8A9 365 aaPredicted RBP8.93□□□□□ -0.98
SHMT2-215ENST00000554656 ZDHHC22Q8N966 263 aa8.93□□□□□ -0.98
SHMT2-215ENST00000554656 OR4M2Q8NGB6 313 aa8.93□□□□□ -0.98
SHMT2-215ENST00000554656 OR51L1Q8NGJ5 315 aa8.93□□□□□ -0.98
SHMT2-215ENST00000554656 OTOSQ8NHW6 89 aa8.93□□□□□ -0.98
SHMT2-215ENST00000554656 FAM216AQ8WUB2 273 aa8.93□□□□□ -0.98
SHMT2-215ENST00000554656 SPRYD4Q8WW59 207 aaPredicted RBP8.93□□□□□ -0.98
SHMT2-215ENST00000554656 ZNRF4Q8WWF5 429 aa8.93□□□□□ -0.98
SHMT2-215ENST00000554656 GATAD2BQ8WXI9 593 aa8.93□□□□□ -0.98
SHMT2-215ENST00000554656 ELMOD3Q96FG2 381 aa8.93□□□□□ -0.98
SHMT2-215ENST00000554656 TSSK2Q96PF2 358 aa8.93□□□□□ -0.98
SHMT2-215ENST00000554656 TSC22D3Q99576 134 aa8.93□□□□□ -0.98
SHMT2-215ENST00000554656 MSL2Q9HCI7 577 aa8.93□□□□□ -0.98
SHMT2-215ENST00000554656 DECR2Q9NUI1 292 aa8.93□□□□□ -0.98
SHMT2-215ENST00000554656 STUB1Q9UNE7 303 aa8.93□□□□□ -0.98
SHMT2-215ENST00000554656 WIPF1O43516 503 aa8.92□□□□□ -0.98
SHMT2-215ENST00000554656 IGHV2-70P01814 119 aa8.92□□□□□ -0.98
SHMT2-215ENST00000554656 HLA-DPB1P04440 258 aa8.92□□□□□ -0.98
SHMT2-215ENST00000554656 CST2P09228 141 aa8.92□□□□□ -0.98
SHMT2-215ENST00000554656 ALOX5APP20292 161 aa8.92□□□□□ -0.98
SHMT2-215ENST00000554656 GADD45AP24522 165 aa8.92□□□□□ -0.98
SHMT2-215ENST00000554656 ZFP36P26651 326 aaKnown RBP8.92□□□□□ -0.98
SHMT2-215ENST00000554656 FGF9P31371 208 aaPredicted RBP8.92□□□□□ -0.98
SHMT2-215ENST00000554656 ENTPD1P49961 510 aa8.92□□□□□ -0.98
SHMT2-215ENST00000554656 GDI2P50395 445 aaKnown RBP8.92□□□□□ -0.98
SHMT2-215ENST00000554656 GBX2P52951 348 aaPredicted RBP8.92□□□□□ -0.98
SHMT2-215ENST00000554656 LCN2P80188 198 aa8.92□□□□□ -0.98
SHMT2-215ENST00000554656 AQP6Q13520 282 aa8.92□□□□□ -0.98
SHMT2-215ENST00000554656 KCNMB1Q16558 191 aa8.92□□□□□ -0.98
SHMT2-215ENST00000554656 HFEQ30201 348 aa8.92□□□□□ -0.98
SHMT2-215ENST00000554656 ZNF684Q5T5D7 378 aa8.92□□□□□ -0.98
SHMT2-215ENST00000554656 KCTD18Q6PI47 426 aaPredicted RBP8.92□□□□□ -0.98
SHMT2-215ENST00000554656 CD200R1LQ6Q8B3 271 aa8.92□□□□□ -0.98
SHMT2-215ENST00000554656 Q6ZR03 302 aa8.92□□□□□ -0.98
SHMT2-215ENST00000554656 GLB1L2Q8IW92 636 aa8.92□□□□□ -0.98
SHMT2-215ENST00000554656 ZNF511Q8NB15 262 aa8.92□□□□□ -0.98
SHMT2-215ENST00000554656 SLC26A10Q8NG04 563 aa8.92□□□□□ -0.98
SHMT2-215ENST00000554656 OR6N2Q8NGY6 317 aa8.92□□□□□ -0.98
SHMT2-215ENST00000554656 ABHD4Q8TB40 342 aa8.92□□□□□ -0.98
SHMT2-215ENST00000554656 RPS4Y2Q8TD47 263 aa8.92□□□□□ -0.98
SHMT2-215ENST00000554656 CCL17Q92583 94 aa8.92□□□□□ -0.98
SHMT2-215ENST00000554656 RAB1CQ92928 201 aa8.92□□□□□ -0.98
SHMT2-215ENST00000554656 DVL3Q92997 716 aaPredicted RBP8.92□□□□□ -0.98
SHMT2-215ENST00000554656 C4orf36Q96KX1 117 aa8.92□□□□□ -0.98
SHMT2-215ENST00000554656 TBX5Q99593 518 aa8.92□□□□□ -0.98
SHMT2-215ENST00000554656 GAL3ST1Q99999 423 aa8.92□□□□□ -0.98
SHMT2-215ENST00000554656 MRPL22Q9NWU5 206 aaKnown RBP8.92□□□□□ -0.98
SHMT2-215ENST00000554656 LAMP5Q9UJQ1 280 aa8.92□□□□□ -0.98
SHMT2-215ENST00000554656 SSR3Q9UNL2 185 aa8.92□□□□□ -0.98
SHMT2-215ENST00000554656 COA3Q9Y2R0 106 aaPredicted RBP8.92□□□□□ -0.98
SHMT2-215ENST00000554656 SF3B6Q9Y3B4 125 aaKnown RBP8.92□□□□□ -0.98
SHMT2-215ENST00000554656 TRDV1A0A1B0GX56 115 aa8.91□□□□□ -0.98
SHMT2-215ENST00000554656 TVP23AA6NH52 213 aa8.91□□□□□ -0.98
SHMT2-215ENST00000554656 METTL15A6NJ78 407 aa8.91□□□□□ -0.98
SHMT2-215ENST00000554656 J3QLI3 93 aa8.91□□□□□ -0.98
SHMT2-215ENST00000554656 OGG1O15527 345 aa8.91□□□□□ -0.98
SHMT2-215ENST00000554656 SPRY1O43609 319 aaPredicted RBP8.91□□□□□ -0.98
SHMT2-215ENST00000554656 LALBAP00709 142 aa8.91□□□□□ -0.98
SHMT2-215ENST00000554656 CD55P08174 381 aa8.91□□□□□ -0.98
SHMT2-215ENST00000554656 ZNF823P16415 610 aa8.91□□□□□ -0.98
SHMT2-215ENST00000554656 GCH1P30793 250 aa8.91□□□□□ -0.98
SHMT2-215ENST00000554656 ROM1Q03395 351 aa8.91□□□□□ -0.98
SHMT2-215ENST00000554656 PSG7Q13046 419 aa8.91□□□□□ -0.98
SHMT2-215ENST00000554656 SCGB2A2Q13296 93 aa8.91□□□□□ -0.98
SHMT2-215ENST00000554656 DOC2BQ14184 412 aa8.91□□□□□ -0.98
SHMT2-215ENST00000554656 MOGQ16653 247 aa8.91□□□□□ -0.98
SHMT2-215ENST00000554656 LIPKQ5VXJ0 399 aa8.91□□□□□ -0.98
SHMT2-215ENST00000554656 OTPQ5XKR4 325 aa8.91□□□□□ -0.98
SHMT2-215ENST00000554656 DMKNQ6E0U4 476 aaPredicted RBP8.91□□□□□ -0.98
SHMT2-215ENST00000554656 SLC18B1Q6NT16 456 aa8.91□□□□□ -0.98
SHMT2-215ENST00000554656 RPL22L1Q6P5R6 122 aaKnown RBP8.91□□□□□ -0.98
SHMT2-215ENST00000554656 DEGS2Q6QHC5 323 aa8.91□□□□□ -0.98
SHMT2-215ENST00000554656 RHOUQ7L0Q8 258 aa8.91□□□□□ -0.98
SHMT2-215ENST00000554656 DPY19L4Q7Z388 723 aa8.91□□□□□ -0.98
SHMT2-215ENST00000554656 FAM220AQ7Z4H9 259 aa8.91□□□□□ -0.98
SHMT2-215ENST00000554656 KLBQ86Z14 1044 aa8.91□□□□□ -0.98
SHMT2-215ENST00000554656 DEFB108BQ8NET1 73 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms