RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 hCG_2014768A0A024R1R8 64 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 WI2-2373I1.2A0A1W2PRP0 233 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 ANKRD61A6NGH8 418 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 ZNF785A8K8V0 405 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 SURF4O15260 269 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 TRIAP1O43715 76 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 FCMRO60667 390 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 HLA-DPB1P04440 258 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 HSMCR30P0CW71 290 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 TRAPPC2P0DI81 140 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 TRAPPC2BP0DI82 140 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 NPR2P20594 1047 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 DRD5P21918 477 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 LCN1P31025 176 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 TNFSF8P32971 234 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 RAD52P43351 418 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 TMEM33P57088 247 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 RGS8P57771 180 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-226ENST00000554350 PRICKLE4Q2TBC4 344 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 KLF17Q5JT82 389 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-226ENST00000554350 CEP78Q5JTW2 689 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 MORN5Q5VZ52 161 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 ZFAND6Q6FIF0 208 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 OR7E24Q6IFN5 339 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 FAM180BQ6P0A1 224 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 ADAMTSL5Q6ZMM2 481 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 ZNF620Q6ZNG0 422 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 Q6ZTK2 550 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 MARCH3Q86UD3 253 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 COMTD1Q86VU5 262 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 LSMEM1Q8N8F7 131 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 C11orf44Q8N8P7 122 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 ATP6V1C2Q8NEY4 427 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 OR52R1Q8NGF1 315 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 ACOT12Q8WYK0 555 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 UFD1Q92890 307 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 YIPF5Q969M3 257 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 SLC25A46Q96AG3 418 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 CEP19Q96LK0 163 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 KCTD7Q96MP8 289 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 WFDC6Q9BQY6 131 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 LMF2Q9BU23 707 aaKnown RBP4.74□□□□□ -1.65
ATXN3-226ENST00000554350 ZNF426Q9BUY5 554 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 ZNF416Q9BWM5 594 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 CHIAQ9BZP6 476 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 MOV10Q9HCE1 1003 aaKnown RBP4.74□□□□□ -1.65
ATXN3-226ENST00000554350 TXNL4BQ9NX01 149 aaKnown RBP4.74□□□□□ -1.65
ATXN3-226ENST00000554350 RHBDL2Q9NX52 303 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 DNAJC27Q9NZQ0 273 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 KLHL9Q9P2J3 617 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 TMA7Q9Y2S6 64 aaKnown RBP4.74□□□□□ -1.65
ATXN3-226ENST00000554350 CAB39Q9Y376 341 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-226ENST00000554350 OR10H1Q9Y4A9 318 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 KCNE3Q9Y6H6 103 aa4.74□□□□□ -1.65
ATXN3-226ENST00000554350 PCNX3Q9H6A9 2034 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 LOC100506127A0A0U1RQW1 187 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 SRRM5B3KS81 715 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 J3QRE1 110 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 CHP2O43745 196 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 PTP4A3O75365 173 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 LYPD3O95274 346 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 SOX14O95416 240 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 IGKV2-30P06310 120 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 TSPAN19P0C672 248 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 LIMS3P0CW19 117 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 LIMS4P0CW20 117 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 THBS4P35443 961 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 PPICP45877 212 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 RPS5P46782 204 aaKnown RBP4.73□□□□□ -1.65
ATXN3-226ENST00000554350 RFX3P48380 749 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 PSMD7P51665 324 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 ZNF41P51814 821 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-226ENST00000554350 TAS2R43P59537 309 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 PRPS1P60891 318 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 PPP3R1P63098 170 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 PSPHP78330 225 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 RIPPLY1Q0D2K3 151 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 ZNF141Q15928 474 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 GABRA6Q16445 453 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 DUSP5Q16690 384 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 DCST2Q5T1A1 773 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 FBXW9Q5XUX1 488 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 TMPRSS11AQ6ZMR5 421 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 ZNF836Q6ZNA1 936 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 SZRD1Q7Z422 152 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 TPRA1Q86W33 373 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 VRK2Q86Y07 508 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 FAM90A1Q86YD7 464 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 ZNF440Q8IYI8 595 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 CADM3Q8N126 398 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 CLIP4Q8N3C7 705 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 WDR31Q8NA23 367 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 POC5Q8NA72 575 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 OR4S1Q8NGB4 309 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 OR52L1Q8NGH7 329 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 OR52E2Q8NGJ4 325 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 OR8D4Q8NGM9 314 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 HAVCR2Q8TDQ0 301 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 ST7LQ8TDW4 575 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 DNAJA4Q8WW22 397 aaPredicted RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms