RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 TP53I3Q53FA7 332 aa19.57■□□□□ 0.72
NEK9-203ENST00000553945 TTC23Q5W5X9 447 aa19.57■□□□□ 0.72
NEK9-203ENST00000553945 FAM220AQ7Z4H9 259 aa19.57■□□□□ 0.72
NEK9-203ENST00000553945 LRRC28Q86X40 367 aaPredicted RBP19.57■□□□□ 0.72
NEK9-203ENST00000553945 C1orf87Q8N0U7 546 aa19.57■□□□□ 0.72
NEK9-203ENST00000553945 Q8TCH9 128 aa19.57■□□□□ 0.72
NEK9-203ENST00000553945 PIGCQ92535 297 aa19.57■□□□□ 0.72
NEK9-203ENST00000553945 LGALS12Q96DT0 336 aa19.57■□□□□ 0.72
NEK9-203ENST00000553945 AMBNQ9NP70 447 aa19.57■□□□□ 0.72
NEK9-203ENST00000553945 GNG8Q9UK08 70 aa19.57■□□□□ 0.72
NEK9-203ENST00000553945 EXOGQ9Y2C4 368 aaKnown RBP19.57■□□□□ 0.72
NEK9-203ENST00000553945 PCDHGB1Q9Y5G3 927 aa19.57■□□□□ 0.72
NEK9-203ENST00000553945 FN1P02751 2386 aaKnown RBP19.57■□□□□ 0.72
NEK9-203ENST00000553945 A6NLC8 198 aa19.56■□□□□ 0.72
NEK9-203ENST00000553945 ZNF850A8MQ14 1090 aa19.56■□□□□ 0.72
NEK9-203ENST00000553945 J3QRE1 110 aa19.56■□□□□ 0.72
NEK9-203ENST00000553945 PTBP3O95758 552 aaKnown RBP19.56■□□□□ 0.72
NEK9-203ENST00000553945 CLIC3O95833 236 aa19.56■□□□□ 0.72
NEK9-203ENST00000553945 PRDX4Q13162 271 aa19.56■□□□□ 0.72
NEK9-203ENST00000553945 ZNF691Q5VV52 312 aa19.56■□□□□ 0.72
NEK9-203ENST00000553945 KLHL36Q8N4N3 616 aa19.56■□□□□ 0.72
NEK9-203ENST00000553945 DHRSXQ8N5I4 330 aa19.56■□□□□ 0.72
NEK9-203ENST00000553945 SPICQ8N5J4 248 aa19.56■□□□□ 0.72
NEK9-203ENST00000553945 PLPP7Q8NBV4 271 aa19.56■□□□□ 0.72
NEK9-203ENST00000553945 APH1BQ8WW43 257 aa19.56■□□□□ 0.72
NEK9-203ENST00000553945 C1orf123Q9NWV4 160 aa19.56■□□□□ 0.72
NEK9-203ENST00000553945 NKX1-2Q9UD57 310 aaPredicted RBP19.56■□□□□ 0.72
NEK9-203ENST00000553945 PCDHB10Q9UN67 800 aa19.56■□□□□ 0.72
NEK9-203ENST00000553945 SLC22A13Q9Y226 551 aa19.56■□□□□ 0.72
NEK9-203ENST00000553945 MPC1Q9Y5U8 109 aa19.56■□□□□ 0.72
NEK9-203ENST00000553945 ANXA2P2A6NMY6 339 aa19.55■□□□□ 0.72
NEK9-203ENST00000553945 CRLF1O75462 422 aa19.55■□□□□ 0.72
NEK9-203ENST00000553945 CST4P01036 141 aa19.55■□□□□ 0.72
NEK9-203ENST00000553945 IGLV3-1P01715 115 aa19.55■□□□□ 0.72
NEK9-203ENST00000553945 MSMBP08118 114 aa19.55■□□□□ 0.72
NEK9-203ENST00000553945 ATP6V1B1P15313 513 aa19.55■□□□□ 0.72
NEK9-203ENST00000553945 MDH2P40926 338 aaKnown RBP19.55■□□□□ 0.72
NEK9-203ENST00000553945 TMEM155Q4W5P6 130 aa19.55■□□□□ 0.72
NEK9-203ENST00000553945 FAM201AQ5SY85 155 aa19.55■□□□□ 0.72
NEK9-203ENST00000553945 THAP5Q7Z6K1 395 aa19.55■□□□□ 0.72
NEK9-203ENST00000553945 ELMOD2Q8IZ81 293 aa19.55■□□□□ 0.72
NEK9-203ENST00000553945 ACBD7Q8N6N7 88 aa19.55■□□□□ 0.72
NEK9-203ENST00000553945 SEMA6DQ8NFY4 1073 aa19.55■□□□□ 0.72
NEK9-203ENST00000553945 OR51F2Q8NH61 342 aa19.55■□□□□ 0.72
NEK9-203ENST00000553945 RORBQ92753 470 aa19.55■□□□□ 0.72
NEK9-203ENST00000553945 MICU1Q9BPX6 476 aa19.55■□□□□ 0.72
NEK9-203ENST00000553945 ACOXLQ9NUZ1 547 aa19.55■□□□□ 0.72
NEK9-203ENST00000553945 RNF7Q9UBF6 113 aa19.55■□□□□ 0.72
NEK9-203ENST00000553945 MALRD1Q5VYJ5 2156 aa19.54■□□□□ 0.72
NEK9-203ENST00000553945 P2RY10O00398 339 aa19.54■□□□□ 0.72
NEK9-203ENST00000553945 DVL1P1P54792 670 aaPredicted RBP19.54■□□□□ 0.72
NEK9-203ENST00000553945 SLC34A1Q06495 639 aa19.54■□□□□ 0.72
NEK9-203ENST00000553945 RIPPLY1Q0D2K3 151 aa19.54■□□□□ 0.72
NEK9-203ENST00000553945 GLCCI1Q86VQ1 547 aa19.54■□□□□ 0.72
NEK9-203ENST00000553945 CATSPERDQ86XM0 798 aa19.54■□□□□ 0.72
NEK9-203ENST00000553945 MUC20Q8N307 709 aaPredicted RBP19.54■□□□□ 0.72
NEK9-203ENST00000553945 BOLLQ8N9W6 283 aaKnown RBP19.54■□□□□ 0.72
NEK9-203ENST00000553945 RTL8AQ9BWD3 113 aa19.54■□□□□ 0.72
NEK9-203ENST00000553945 ABCB9Q9NP78 766 aa19.54■□□□□ 0.72
NEK9-203ENST00000553945 RPL36Q9Y3U8 105 aaKnown RBP19.54■□□□□ 0.72
NEK9-203ENST00000553945 PPIAL4EA0A075B759 164 aa19.53■□□□□ 0.72
NEK9-203ENST00000553945 ZNF816-ZNF321PA0A0X1KG74 233 aa19.53■□□□□ 0.72
NEK9-203ENST00000553945 hCG_1807616A0A1W2PRN6 198 aa19.53■□□□□ 0.72
NEK9-203ENST00000553945 PPIAL4DF5H284 164 aa19.53■□□□□ 0.72
NEK9-203ENST00000553945 WBP4O75554 376 aaKnown RBP19.53■□□□□ 0.72
NEK9-203ENST00000553945 MTRF1O75570 445 aaKnown RBP19.53■□□□□ 0.72
NEK9-203ENST00000553945 PPIAL4FP0DN26 164 aa19.53■□□□□ 0.72
NEK9-203ENST00000553945 PSMB10P40306 273 aa19.53■□□□□ 0.72
NEK9-203ENST00000553945 ADARB1P78563 741 aaKnown RBP19.53■□□□□ 0.72
NEK9-203ENST00000553945 SMN1Q16637 294 aaKnown RBP19.53■□□□□ 0.72
NEK9-203ENST00000553945 ODF4Q2M2E3 257 aa19.53■□□□□ 0.72
NEK9-203ENST00000553945 CDONQ4KMG0 1287 aa19.53■□□□□ 0.72
NEK9-203ENST00000553945 ZNF826PQ6ZT77 177 aa19.53■□□□□ 0.72
NEK9-203ENST00000553945 WDR86Q86TI4 376 aa19.53■□□□□ 0.72
NEK9-203ENST00000553945 ZDHHC23Q8IYP9 409 aa19.53■□□□□ 0.72
NEK9-203ENST00000553945 ITFG2Q969R8 447 aa19.53■□□□□ 0.72
NEK9-203ENST00000553945 ITPKCQ96DU7 683 aa19.53■□□□□ 0.72
NEK9-203ENST00000553945 POM121Q96HA1 1249 aa19.53■□□□□ 0.72
NEK9-203ENST00000553945 VCXQ9H320 206 aa19.53■□□□□ 0.72
NEK9-203ENST00000553945 TMEM165Q9HC07 324 aa19.53■□□□□ 0.72
NEK9-203ENST00000553945 TMEM160Q9NX00 188 aa19.53■□□□□ 0.72
NEK9-203ENST00000553945 PIGLQ9Y2B2 252 aa19.53■□□□□ 0.72
NEK9-203ENST00000553945 PPIAL4AQ9Y536 164 aa19.53■□□□□ 0.72
NEK9-203ENST00000553945 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.53■□□□□ 0.722e-6■■□□□ 13.9
NEK9-203ENST00000553945 DHRS3O75911 302 aa19.52■□□□□ 0.72
NEK9-203ENST00000553945 FADS2O95864 444 aaKnown RBP19.52■□□□□ 0.72
NEK9-203ENST00000553945 FAHP16930 419 aa19.52■□□□□ 0.72
NEK9-203ENST00000553945 ISL1P61371 349 aa19.52■□□□□ 0.72
NEK9-203ENST00000553945 HOXA4Q00056 320 aaPredicted RBP19.52■□□□□ 0.72
NEK9-203ENST00000553945 RAB40BQ12829 278 aa19.52■□□□□ 0.72
NEK9-203ENST00000553945 KCTD8Q6ZWB6 473 aa19.52■□□□□ 0.72
NEK9-203ENST00000553945 KCTD20Q7Z5Y7 419 aa19.52■□□□□ 0.72
NEK9-203ENST00000553945 LHFPL3Q86UP9 236 aa19.52■□□□□ 0.72
NEK9-203ENST00000553945 SETD9Q8NE22 299 aa19.52■□□□□ 0.72
NEK9-203ENST00000553945 C19orf18Q8NEA5 215 aa19.52■□□□□ 0.72
NEK9-203ENST00000553945 OR1M1Q8NGA1 313 aa19.52■□□□□ 0.72
NEK9-203ENST00000553945 OR52I1Q8NGK6 324 aa19.52■□□□□ 0.72
NEK9-203ENST00000553945 CNIH3Q8TBE1 160 aa19.52■□□□□ 0.72
NEK9-203ENST00000553945 OR5P3Q8WZ94 311 aa19.52■□□□□ 0.72
NEK9-203ENST00000553945 TMEM186Q96B77 213 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms