RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 DHRS3O75911 302 aa11.1□□□□□ -0.63
VIPAS39-206ENST00000553888 ALDOBP05062 364 aa11.1□□□□□ -0.63
VIPAS39-206ENST00000553888 VSIG8P0DPA2 414 aa11.1□□□□□ -0.63
VIPAS39-206ENST00000553888 HIKESHIQ53FT3 197 aa11.1□□□□□ -0.63
VIPAS39-206ENST00000553888 C1QL2Q7Z5L3 287 aa11.1□□□□□ -0.63
VIPAS39-206ENST00000553888 TMEM104Q8NE00 496 aa11.1□□□□□ -0.63
VIPAS39-206ENST00000553888 CHAC2Q8WUX2 184 aa11.1□□□□□ -0.63
VIPAS39-206ENST00000553888 REEP6Q96HR9 211 aa11.1□□□□□ -0.63
VIPAS39-206ENST00000553888 NICN1Q9BSH3 213 aa11.1□□□□□ -0.63
VIPAS39-206ENST00000553888 LINC00470Q9BZP3 86 aa11.1□□□□□ -0.63
VIPAS39-206ENST00000553888 BANF2Q9H503 90 aa11.1□□□□□ -0.63
VIPAS39-206ENST00000553888 HRASLSQ9HDD0 168 aa11.1□□□□□ -0.63
VIPAS39-206ENST00000553888 PARPBPQ9NWS1 579 aa11.1□□□□□ -0.63
VIPAS39-206ENST00000553888 LOC100509620A0A075B734 347 aa11.09□□□□□ -0.63
VIPAS39-206ENST00000553888 A0A0U1RQV5 110 aa11.09□□□□□ -0.63
VIPAS39-206ENST00000553888 CEACAM4O75871 244 aa11.09□□□□□ -0.63
VIPAS39-206ENST00000553888 CD79AP11912 226 aa11.09□□□□□ -0.63
VIPAS39-206ENST00000553888 SNTB2Q13425 540 aaKnown RBP11.09□□□□□ -0.63
VIPAS39-206ENST00000553888 RNPS1Q15287 305 aaKnown RBP11.09□□□□□ -0.63
VIPAS39-206ENST00000553888 OR4D10Q8NGI6 311 aa11.09□□□□□ -0.63
VIPAS39-206ENST00000553888 TRIB1Q96RU8 372 aa11.09□□□□□ -0.63
VIPAS39-206ENST00000553888 MARVELD1Q9BSK0 173 aa11.09□□□□□ -0.63
VIPAS39-206ENST00000553888 GPR173Q9NS66 373 aa11.09□□□□□ -0.63
VIPAS39-206ENST00000553888 NKIRAS2Q9NYR9 191 aa11.09□□□□□ -0.63
VIPAS39-206ENST00000553888 FLVCR2Q9UPI3 526 aa11.09□□□□□ -0.63
VIPAS39-206ENST00000553888 V9GYS6 101 aa11.09□□□□□ -0.63
VIPAS39-206ENST00000553888 INMT-MINDY4F8WBC2 141 aa11.09□□□□□ -0.63
VIPAS39-206ENST00000553888 CCNKO75909 580 aa11.09□□□□□ -0.63
VIPAS39-206ENST00000553888 FARS2O95363 451 aaKnown RBP11.09□□□□□ -0.63
VIPAS39-206ENST00000553888 EDN3P14138 238 aa11.09□□□□□ -0.63
VIPAS39-206ENST00000553888 QRFPP83859 136 aa11.09□□□□□ -0.63
VIPAS39-206ENST00000553888 GLIPR1L1Q6UWM5 242 aa11.09□□□□□ -0.63
VIPAS39-206ENST00000553888 DVL3Q92997 716 aaPredicted RBP11.09□□□□□ -0.63
VIPAS39-206ENST00000553888 PHF21AQ96BD5 680 aa11.09□□□□□ -0.63
VIPAS39-206ENST00000553888 OR10A2Q9H208 303 aa11.09□□□□□ -0.63
VIPAS39-206ENST00000553888 DIABLOQ9NR28 239 aa11.09□□□□□ -0.63
VIPAS39-206ENST00000553888 RBMX2Q9Y388 322 aaKnown RBP11.09□□□□□ -0.63
VIPAS39-206ENST00000553888 A0A1W2PR80 420 aa11.08□□□□□ -0.63
VIPAS39-206ENST00000553888 TMEM235A6NFC5 223 aa11.08□□□□□ -0.63
VIPAS39-206ENST00000553888 TCRBP04435 133 aa11.08□□□□□ -0.63
VIPAS39-206ENST00000553888 GLAP06280 429 aa11.08□□□□□ -0.63
VIPAS39-206ENST00000553888 SCAND1P57086 179 aa11.08□□□□□ -0.63
VIPAS39-206ENST00000553888 ZNF92Q03936 586 aa11.08□□□□□ -0.63
VIPAS39-206ENST00000553888 PPA1Q15181 289 aa11.08□□□□□ -0.63
VIPAS39-206ENST00000553888 DRAM2Q6UX65 266 aa11.08□□□□□ -0.63
VIPAS39-206ENST00000553888 ZNF101Q8IZC7 436 aa11.08□□□□□ -0.63
VIPAS39-206ENST00000553888 NAXEQ8NCW5 288 aa11.08□□□□□ -0.63
VIPAS39-206ENST00000553888 OR10K1Q8NGX5 313 aa11.08□□□□□ -0.63
VIPAS39-206ENST00000553888 MS4A3Q96HJ5 214 aa11.08□□□□□ -0.63
VIPAS39-206ENST00000553888 DMRTB1Q96MA1 342 aa11.08□□□□□ -0.63
VIPAS39-206ENST00000553888 C1orf147Q96MC9 270 aaPredicted RBP11.08□□□□□ -0.63
VIPAS39-206ENST00000553888 GPER1Q99527 375 aa11.08□□□□□ -0.63
VIPAS39-206ENST00000553888 CACNG6Q9BXT2 260 aa11.08□□□□□ -0.63
VIPAS39-206ENST00000553888 MCUBQ9NWR8 336 aa11.08□□□□□ -0.63
VIPAS39-206ENST00000553888 MRPS28Q9Y2Q9 187 aaKnown RBP11.08□□□□□ -0.63
VIPAS39-206ENST00000553888 RP1L1Q8IWN7 2480 aaPredicted RBP11.08□□□□□ -0.64
VIPAS39-206ENST00000553888 IL18BPO95998 194 aa11.08□□□□□ -0.64
VIPAS39-206ENST00000553888 IGHG3P01860 377 aa11.08□□□□□ -0.64
VIPAS39-206ENST00000553888 GABRA1P14867 456 aa11.08□□□□□ -0.64
VIPAS39-206ENST00000553888 IL32P24001 234 aa11.08□□□□□ -0.64
VIPAS39-206ENST00000553888 PCGF3Q3KNV8 242 aa11.08□□□□□ -0.64
VIPAS39-206ENST00000553888 KRTAP27-1Q3LI81 207 aa11.08□□□□□ -0.64
VIPAS39-206ENST00000553888 TBRG1Q3YBR2 411 aa11.08□□□□□ -0.64
VIPAS39-206ENST00000553888 P4HA3Q7Z4N8 544 aa11.08□□□□□ -0.64
VIPAS39-206ENST00000553888 OR8S1Q8NH09 359 aa11.08□□□□□ -0.64
VIPAS39-206ENST00000553888 SCNM1Q9BWG6 230 aa11.08□□□□□ -0.64
VIPAS39-206ENST00000553888 ANKRD20A5PA0PJZ0 165 aa11.08□□□□□ -0.64
VIPAS39-206ENST00000553888 NHLH1Q02575 133 aa11.08□□□□□ -0.64
VIPAS39-206ENST00000553888 TSC22D1Q15714 1073 aa11.08□□□□□ -0.64
VIPAS39-206ENST00000553888 PGAP1Q75T13 922 aa11.08□□□□□ -0.64
VIPAS39-206ENST00000553888 OR6F1Q8NGZ6 308 aa11.08□□□□□ -0.64
VIPAS39-206ENST00000553888 RNF122Q9H9V4 155 aa11.08□□□□□ -0.64
VIPAS39-206ENST00000553888 A0A0A6YYD4 124 aa11.07□□□□□ -0.64
VIPAS39-206ENST00000553888 RPL36A-HNRNPH2H7BZ11 118 aa11.07□□□□□ -0.64
VIPAS39-206ENST00000553888 PLATP00750 562 aa11.07□□□□□ -0.64
VIPAS39-206ENST00000553888 CTRB1P17538 263 aa11.07□□□□□ -0.64
VIPAS39-206ENST00000553888 VEGFCP49767 419 aa11.07□□□□□ -0.64
VIPAS39-206ENST00000553888 OLFML2AQ68BL7 652 aa11.07□□□□□ -0.64
VIPAS39-206ENST00000553888 CTRB2Q6GPI1 263 aa11.07□□□□□ -0.64
VIPAS39-206ENST00000553888 BEST4Q8NFU0 473 aa11.07□□□□□ -0.64
VIPAS39-206ENST00000553888 FOXRED1Q96CU9 486 aaPredicted RBP11.07□□□□□ -0.64
VIPAS39-206ENST00000553888 OR51B6Q9H340 312 aa11.07□□□□□ -0.64
VIPAS39-206ENST00000553888 DPAGT1Q9H3H5 408 aa11.07□□□□□ -0.64
VIPAS39-206ENST00000553888 CRIM1Q9NZV1 1036 aa11.07□□□□□ -0.64
VIPAS39-206ENST00000553888 ESPL1Q14674 2120 aa11.07□□□□□ -0.64
VIPAS39-206ENST00000553888 C5orf49A4QMS7 147 aa11.07□□□□□ -0.64
VIPAS39-206ENST00000553888 CENPXA8MT69 81 aa11.07□□□□□ -0.64
VIPAS39-206ENST00000553888 MPIG6BO95866 241 aa11.07□□□□□ -0.64
VIPAS39-206ENST00000553888 FCGR2AP12318 317 aa11.07□□□□□ -0.64
VIPAS39-206ENST00000553888 MNDAP41218 407 aa11.07□□□□□ -0.64
VIPAS39-206ENST00000553888 PCBD1P61457 104 aa11.07□□□□□ -0.64
VIPAS39-206ENST00000553888 KISS1Q15726 138 aa11.07□□□□□ -0.64
VIPAS39-206ENST00000553888 SLC22A6Q4U2R8 563 aa11.07□□□□□ -0.64
VIPAS39-206ENST00000553888 ATAD3CQ5T2N8 411 aa11.07□□□□□ -0.64
VIPAS39-206ENST00000553888 ZNF584Q8IVC4 421 aa11.07□□□□□ -0.64
VIPAS39-206ENST00000553888 OR52H1Q8NGJ2 320 aa11.07□□□□□ -0.64
VIPAS39-206ENST00000553888 SSC4DQ8WTU2 575 aa11.07□□□□□ -0.64
VIPAS39-206ENST00000553888 ST6GAL2Q96JF0 529 aa11.07□□□□□ -0.64
VIPAS39-206ENST00000553888 FYTTD1Q96QD9 318 aaKnown RBP11.07□□□□□ -0.64
VIPAS39-206ENST00000553888 RAB27BO00194 218 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms