RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 FOXE1O00358 373 aaPredicted RBP1.62□□□□□ -2.15
VRK1-202ENST00000553683 TOR1AO14656 332 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 SLC22A1O15245 554 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 RBFOX2O43251 390 aaKnown RBP eCLIP1.62□□□□□ -2.15
VRK1-202ENST00000553683 CTNSO60931 367 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 NOS1APO75052 506 aaPredicted RBP1.62□□□□□ -2.15
VRK1-202ENST00000553683 DEXIO95424 95 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 APOC1P02654 83 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 UGT2B4P06133 528 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 GP1BAP07359 652 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 GUSBP08236 651 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 LINC00869P0C866 280 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 IGKV1-13P0DP09 117 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 TNNI1P19237 187 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 CCNOP22674 350 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 HSD11B1P28845 292 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 CRABP1P29762 137 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 P2RY2P41231 377 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 RAB9AP51151 201 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 PSMD4P55036 377 aaKnown RBP1.62□□□□□ -2.15
VRK1-202ENST00000553683 ATP5J2P56134 94 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 AP3S2P59780 193 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 AP1S1P61966 158 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 YWHAGP61981 247 aaKnown RBP eCLIP1.62□□□□□ -2.15
VRK1-202ENST00000553683 ARF6P62330 175 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 RAB11AP62491 216 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 RAP1AP62834 184 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 RPS15P62841 145 aaKnown RBP1.62□□□□□ -2.15
VRK1-202ENST00000553683 RBX1P62877 108 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 RPL10AP62906 217 aaKnown RBP1.62□□□□□ -2.15
VRK1-202ENST00000553683 PSPHP78330 225 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 CDK16Q00536 496 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 LOXL1Q08397 574 aaPredicted RBP1.62□□□□□ -2.15
VRK1-202ENST00000553683 ILKQ13418 452 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 PON3Q15166 354 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 RAB11BQ15907 218 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 IGFBP7Q16270 282 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 PSG3Q16557 428 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 WHAMMP3Q1A5X7 153 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 EXOC3L2Q2M3D2 409 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 GOLGA7BQ2TAP0 167 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 C18orf21Q32NC0 220 aaPredicted RBP1.62□□□□□ -2.15
VRK1-202ENST00000553683 COQ5Q5HYK3 327 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 PDZK1Q5T2W1 519 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 PLCXD3Q63HM9 321 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 SPOPLQ6IQ16 392 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 TRIM40Q6P9F5 258 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 CNIH2Q6PI25 160 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 FAM151BQ6UXP7 276 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 ASCL4Q6XD76 172 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 LRRC74BQ6ZQY2 392 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 PLEKHG7Q6ZR37 379 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 ZNF493Q6ZR52 646 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 NTM-AS1Q6ZSK4 140 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 PHF13Q86YI8 300 aaPredicted RBP1.62□□□□□ -2.15
VRK1-202ENST00000553683 VSTM4Q8IW00 320 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 FAM71AQ8IYT1 594 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 LRRC75A-AS1Q8N1F1 130 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 C17orf78Q8N4C9 275 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 ZNF557Q8N988 423 aaPredicted RBP1.62□□□□□ -2.15
VRK1-202ENST00000553683 OR9K2Q8NGE7 335 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 OR5D13Q8NGL4 314 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 OR6Q1Q8NGQ2 317 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 OR2V1Q8NHB1 315 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 SYNPRQ8TBG9 265 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 YIPF5Q969M3 257 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 MCUR1Q96AQ8 359 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 CPB2Q96IY4 423 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 PACRGQ96M98 296 aaPredicted RBP1.62□□□□□ -2.15
VRK1-202ENST00000553683 PRRT1Q99946 306 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 PRRG3Q9BZD7 231 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 OR2AG1Q9H205 316 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 GAL3ST2Q9H3Q3 398 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 MYOZ1Q9NP98 299 aaPredicted RBP1.62□□□□□ -2.15
VRK1-202ENST00000553683 IMP3Q9NV31 184 aaKnown RBP1.62□□□□□ -2.15
VRK1-202ENST00000553683 RMND1Q9NWS8 449 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 ADA2Q9NZK5 511 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 SLC17A7Q9P2U7 560 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 PISDQ9UG56 409 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 STARD10Q9Y365 291 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 NUBP2Q9Y5Y2 271 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 ADGRL3Q9HAR2 1447 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 KDM5CP41229 1560 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 ANKRD11Q6UB99 2663 aaPredicted RBP1.62□□□□□ -2.15
VRK1-202ENST00000553683 EIF3AQ14152 1382 aaKnown RBP1.61□□□□□ -2.15
VRK1-202ENST00000553683 KIF24Q5T7B8 1368 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 DHX57Q6P158 1386 aaKnown RBP1.61□□□□□ -2.15
VRK1-202ENST00000553683 EIF4G3O43432 1585 aaKnown RBP1.61□□□□□ -2.15
VRK1-202ENST00000553683 UHRF1BP1Q6BDS2 1440 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 IGLV3-22A0A075B6J6 115 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 TRAV26-1A0A087WT03 109 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 A0A0A6YYH2 397 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 FAM240BA0A1B0GVZ2 78 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 GNG14A0A1W2PPG7 69 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 TMEM223A0PJW6 202 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 MGAT4DA6NG13 374 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 A6NJ64 397 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 SMIM23A6NLE4 172 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 PRAMEF26H0Y7S4 382 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 MKRN2OSH3BPM6 223 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms