RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 ZNF32P17041 273 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 NPR2P20594 1047 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 LAP3P28838 519 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 PYCR1P32322 319 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 CDKN2AP42771 156 aaKnown RBP4.01□□□□□ -1.77
ATXN3-222ENST00000553570 GDI2P50395 445 aaKnown RBP4.01□□□□□ -1.77
ATXN3-222ENST00000553570 RPS4XP62701 263 aaKnown RBP4.01□□□□□ -1.77
ATXN3-222ENST00000553570 MRPS34P82930 218 aaKnown RBP4.01□□□□□ -1.77
ATXN3-222ENST00000553570 NAAAQ02083 359 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 TSPAN31Q12999 210 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 SNTB2Q13425 540 aaKnown RBP4.01□□□□□ -1.77
ATXN3-222ENST00000553570 KRR1Q13601 381 aaKnown RBP4.01□□□□□ -1.77
ATXN3-222ENST00000553570 TAF13Q15543 124 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 TBC1D28Q2M2D7 210 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 PABPC1L2AQ5JQF8 200 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 ARMC4Q5T2S8 1044 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 GPR139Q6DWJ6 353 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 SLC25A47Q6Q0C1 308 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 UGT2A3Q6UWM9 527 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 PAMR1Q6UXH9 720 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 NHLRC1Q6VVB1 395 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 TMEM179BQ7Z7N9 219 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 AQP12AQ8IXF9 295 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 MUC15Q8N387 334 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 ZNF611Q8N823 705 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 PRR26Q8N8Z3 221 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 CYB561A3Q8NBI2 242 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 SLC30A7Q8NEW0 376 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 OR10G2Q8NGC3 310 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 OR51L1Q8NGJ5 315 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 OR1J2Q8NGS2 313 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 OR2AJ1Q8NGZ0 328 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 AKR7LQ8NHP1 331 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 TEX47Q8TBZ9 253 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 MAGEE2Q8TD90 523 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-222ENST00000553570 LIPHQ8WWY8 451 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 POP5Q969H6 163 aaKnown RBP4.01□□□□□ -1.77
ATXN3-222ENST00000553570 GRAMD2BQ96HH9 432 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 PLEKHA8Q96JA3 519 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 TSSK2Q96PF2 358 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 NMNAT3Q96T66 252 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 FEVQ99581 238 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 GPA33Q99795 319 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 DHRS9Q9BPW9 319 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 ALG12Q9BV10 488 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 TEX12Q9BXU0 123 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 RBM38Q9H0Z9 239 aaKnown RBP4.01□□□□□ -1.77
ATXN3-222ENST00000553570 SYT4Q9H2B2 425 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 HRH4Q9H3N8 390 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 SIAEQ9HAT2 523 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 SEBOXQ9HB31 216 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-222ENST00000553570 RPRD1BQ9NQG5 326 aaKnown RBP4.01□□□□□ -1.77
ATXN3-222ENST00000553570 VNN3Q9NY84 501 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 DNAJB9Q9UBS3 223 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 SLC7A8Q9UHI5 535 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 SIGLEC7Q9Y286 467 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 PAM16Q9Y3D7 125 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 GRIP1Q9Y3R0 1128 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 AP4S1Q9Y587 144 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 TIMM10BQ9Y5J6 103 aa4.01□□□□□ -1.77
ATXN3-222ENST00000553570 NOTCH2Q04721 2471 aa4□□□□□ -1.77
ATXN3-222ENST00000553570 ARPC4-TTLL3A0A0A6YYG9 625 aa4□□□□□ -1.77
ATXN3-222ENST00000553570 IGKV1D-43A0A0B4J1Z2 117 aa4□□□□□ -1.77
ATXN3-222ENST00000553570 IGHV2OR16-5A0A0B4J2B6 119 aa4□□□□□ -1.77
ATXN3-222ENST00000553570 A0A1W2PPW3 197 aa4□□□□□ -1.77
ATXN3-222ENST00000553570 PRSS37A4D1T9 235 aa4□□□□□ -1.77
ATXN3-222ENST00000553570 C5orf49A4QMS7 147 aa4□□□□□ -1.77
ATXN3-222ENST00000553570 TVP23AA6NH52 213 aa4□□□□□ -1.77
ATXN3-222ENST00000553570 RIIAD1A6NNX1 92 aa4□□□□□ -1.77
ATXN3-222ENST00000553570 C12orf71A8MTZ7 269 aa4□□□□□ -1.77
ATXN3-222ENST00000553570 G3V2T6 193 aa4□□□□□ -1.77
ATXN3-222ENST00000553570 OGG1O15527 345 aa4□□□□□ -1.77
ATXN3-222ENST00000553570 MITFO75030 526 aaPredicted RBP4□□□□□ -1.77
ATXN3-222ENST00000553570 NDUFS7O75251 213 aa4□□□□□ -1.77
ATXN3-222ENST00000553570 IGF2P01344 180 aa4□□□□□ -1.77
ATXN3-222ENST00000553570 IFNGP01579 166 aa4□□□□□ -1.77
ATXN3-222ENST00000553570 SERPINA5P05154 406 aa4□□□□□ -1.77
ATXN3-222ENST00000553570 GYPBP06028 91 aa4□□□□□ -1.77
ATXN3-222ENST00000553570 SOD3P08294 240 aa4□□□□□ -1.77
ATXN3-222ENST00000553570 ADRA2AP08913 450 aa4□□□□□ -1.77
ATXN3-222ENST00000553570 CD99P14209 185 aa4□□□□□ -1.77
ATXN3-222ENST00000553570 HIST1H1CP16403 213 aaKnown RBP4□□□□□ -1.77
ATXN3-222ENST00000553570 ZNF23P17027 643 aa4□□□□□ -1.77
ATXN3-222ENST00000553570 ZNF26P17031 533 aaPredicted RBP4□□□□□ -1.77
ATXN3-222ENST00000553570 GSTM3P21266 225 aa4□□□□□ -1.77
ATXN3-222ENST00000553570 MSR1P21757 451 aa4□□□□□ -1.77
ATXN3-222ENST00000553570 PAX7P23759 505 aa4□□□□□ -1.77
ATXN3-222ENST00000553570 FASP25445 335 aa4□□□□□ -1.77
ATXN3-222ENST00000553570 STOMP27105 288 aa4□□□□□ -1.77
ATXN3-222ENST00000553570 LOXP28300 417 aaPredicted RBP4□□□□□ -1.77
ATXN3-222ENST00000553570 CRABP1P29762 137 aa4□□□□□ -1.77
ATXN3-222ENST00000553570 CALCRP30988 508 aa4□□□□□ -1.77
ATXN3-222ENST00000553570 HOXD3P31249 432 aaPredicted RBP4□□□□□ -1.77
ATXN3-222ENST00000553570 GSSP48637 474 aa4□□□□□ -1.77
ATXN3-222ENST00000553570 AMTP48728 403 aa4□□□□□ -1.77
ATXN3-222ENST00000553570 PCBD1P61457 104 aa4□□□□□ -1.77
ATXN3-222ENST00000553570 SNRPD2P62316 118 aaKnown RBP4□□□□□ -1.77
ATXN3-222ENST00000553570 PSG4Q00888 419 aa4□□□□□ -1.77
ATXN3-222ENST00000553570 GINS1Q14691 196 aa4□□□□□ -1.77
ATXN3-222ENST00000553570 MEP1BQ16820 701 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms