RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 DDOSTP39656 456 aa13.31□□□□□ -0.28
RAB5C-209ENST00000552162 NAA10P41227 235 aaPredicted RBP13.31□□□□□ -0.28
RAB5C-209ENST00000552162 GSK3BP49841 420 aa13.31□□□□□ -0.28
RAB5C-209ENST00000552162 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.31□□□□□ -0.28
RAB5C-209ENST00000552162 SF3A3Q12874 501 aaKnown RBP eCLIP13.31□□□□□ -0.283e-17■■■■■ 41.4
RAB5C-209ENST00000552162 LYPD4Q6UWN0 246 aa13.31□□□□□ -0.28
RAB5C-209ENST00000552162 DCXRQ7Z4W1 244 aa13.31□□□□□ -0.28
RAB5C-209ENST00000552162 ZDHHC21Q8IVQ6 265 aa13.31□□□□□ -0.28
RAB5C-209ENST00000552162 PROKR2Q8NFJ6 384 aa13.31□□□□□ -0.28
RAB5C-209ENST00000552162 SPSB4Q96A44 273 aa13.31□□□□□ -0.28
RAB5C-209ENST00000552162 DHRS1Q96LJ7 313 aa13.31□□□□□ -0.28
RAB5C-209ENST00000552162 FAM234AQ9H0X4 552 aa13.31□□□□□ -0.28
RAB5C-209ENST00000552162 COL7A1Q02388 2944 aa13.3□□□□□ -0.28
RAB5C-209ENST00000552162 A0A1W2PQ09 198 aa13.3□□□□□ -0.28
RAB5C-209ENST00000552162 NKX6-3A6NJ46 265 aa13.3□□□□□ -0.28
RAB5C-209ENST00000552162 CDIPTO14735 213 aa13.3□□□□□ -0.28
RAB5C-209ENST00000552162 TBX1O43435 398 aa13.3□□□□□ -0.28
RAB5C-209ENST00000552162 IDH3BO43837 385 aa13.3□□□□□ -0.28
RAB5C-209ENST00000552162 GMFBP60983 142 aa13.3□□□□□ -0.28
RAB5C-209ENST00000552162 TAF13Q15543 124 aa13.3□□□□□ -0.28
RAB5C-209ENST00000552162 LRRC75BQ2VPJ9 315 aa13.3□□□□□ -0.28
RAB5C-209ENST00000552162 NSUN5P1Q3KNT7 163 aa13.3□□□□□ -0.28
RAB5C-209ENST00000552162 SLC35F1Q5T1Q4 408 aa13.3□□□□□ -0.28
RAB5C-209ENST00000552162 ATPAF1Q5TC12 328 aaPredicted RBP13.3□□□□□ -0.28
RAB5C-209ENST00000552162 PGBD2Q6P3X8 592 aa13.3□□□□□ -0.28
RAB5C-209ENST00000552162 SLC16A9Q7RTY1 509 aa13.3□□□□□ -0.28
RAB5C-209ENST00000552162 OR4S1Q8NGB4 309 aa13.3□□□□□ -0.28
RAB5C-209ENST00000552162 OR9Q1Q8NGQ5 310 aa13.3□□□□□ -0.28
RAB5C-209ENST00000552162 RORBQ92753 470 aa13.3□□□□□ -0.28
RAB5C-209ENST00000552162 PHF21AQ96BD5 680 aa13.3□□□□□ -0.28
RAB5C-209ENST00000552162 C7orf34Q96L11 122 aa13.3□□□□□ -0.28
RAB5C-209ENST00000552162 KCNJ15Q99712 375 aa13.3□□□□□ -0.28
RAB5C-209ENST00000552162 DNTTIP1Q9H147 329 aa13.3□□□□□ -0.28
RAB5C-209ENST00000552162 RAB18Q9NP72 206 aa13.3□□□□□ -0.28
RAB5C-209ENST00000552162 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.3□□□□□ -0.28
RAB5C-209ENST00000552162 SNTG1Q9NSN8 517 aa13.3□□□□□ -0.28
RAB5C-209ENST00000552162 HAO2Q9NYQ3 351 aa13.3□□□□□ -0.28
RAB5C-209ENST00000552162 SLC25A10Q9UBX3 287 aaPredicted RBP13.3□□□□□ -0.28
RAB5C-209ENST00000552162 ZNF391Q9UJN7 358 aa13.3□□□□□ -0.28
RAB5C-209ENST00000552162 COMMD3-BMI1R4GMX3 469 aa13.3□□□□□ -0.28
RAB5C-209ENST00000552162 TFF1P04155 84 aa13.29□□□□□ -0.28
RAB5C-209ENST00000552162 SPARCP09486 303 aa13.29□□□□□ -0.28
RAB5C-209ENST00000552162 FAM3AP98173 230 aa13.29□□□□□ -0.28
RAB5C-209ENST00000552162 BLMHQ13867 455 aa13.29□□□□□ -0.28
RAB5C-209ENST00000552162 KRT72Q14CN4 511 aa13.29□□□□□ -0.28
RAB5C-209ENST00000552162 DGUOKQ16854 277 aa13.29□□□□□ -0.28
RAB5C-209ENST00000552162 TIGD6Q17RP2 521 aa13.29□□□□□ -0.28
RAB5C-209ENST00000552162 CRIP3Q6Q6R5 217 aa13.29□□□□□ -0.28
RAB5C-209ENST00000552162 FAM86B1Q8N7N1 296 aa13.29□□□□□ -0.28
RAB5C-209ENST00000552162 CYB561A3Q8NBI2 242 aa13.29□□□□□ -0.28
RAB5C-209ENST00000552162 ZNRF4Q8WWF5 429 aa13.29□□□□□ -0.28
RAB5C-209ENST00000552162 SLAMF6Q96DU3 332 aa13.29□□□□□ -0.28
RAB5C-209ENST00000552162 GAFA1Q96PS6 74 aa13.29□□□□□ -0.28
RAB5C-209ENST00000552162 KCTD14Q9BQ13 255 aaPredicted RBP13.29□□□□□ -0.28
RAB5C-209ENST00000552162 NPFFR1Q9GZQ6 430 aa13.29□□□□□ -0.28
RAB5C-209ENST00000552162 TLNRD1Q9H1K6 362 aa13.29□□□□□ -0.28
RAB5C-209ENST00000552162 WDR13Q9H1Z4 485 aa13.29□□□□□ -0.28
RAB5C-209ENST00000552162 PPP1R3EQ9H7J1 279 aa13.29□□□□□ -0.28
RAB5C-209ENST00000552162 CENPMQ9NSP4 180 aa13.29□□□□□ -0.28
RAB5C-209ENST00000552162 RYR3Q15413 4870 aa13.29□□□□□ -0.28
RAB5C-209ENST00000552162 ZNF878C9JN71 531 aa13.28□□□□□ -0.28
RAB5C-209ENST00000552162 SLC22A2O15244 555 aa13.28□□□□□ -0.28
RAB5C-209ENST00000552162 ANGPTL7O43827 346 aa13.28□□□□□ -0.28
RAB5C-209ENST00000552162 CHST1O43916 411 aa13.28□□□□□ -0.28
RAB5C-209ENST00000552162 FBXO24O75426 580 aa13.28□□□□□ -0.28
RAB5C-209ENST00000552162 NDUFB7P17568 137 aa13.28□□□□□ -0.28
RAB5C-209ENST00000552162 GNALP38405 381 aa13.28□□□□□ -0.28
RAB5C-209ENST00000552162 VAX1Q5SQQ9 334 aa13.28□□□□□ -0.28
RAB5C-209ENST00000552162 HCP5Q6MZN7 132 aa13.28□□□□□ -0.28
RAB5C-209ENST00000552162 ZNF788Q6ZQV5 615 aa13.28□□□□□ -0.28
RAB5C-209ENST00000552162 OR51L1Q8NGJ5 315 aa13.28□□□□□ -0.28
RAB5C-209ENST00000552162 OR2T4Q8NH00 348 aa13.28□□□□□ -0.28
RAB5C-209ENST00000552162 RP9Q8TA86 221 aaKnown RBP13.28□□□□□ -0.28
RAB5C-209ENST00000552162 DUS3LQ96G46 650 aaKnown RBP13.28□□□□□ -0.28
RAB5C-209ENST00000552162 REEP6Q96HR9 211 aa13.28□□□□□ -0.28
RAB5C-209ENST00000552162 AJUBAQ96IF1 538 aa13.28□□□□□ -0.28
RAB5C-209ENST00000552162 RAB3IPQ96QF0 476 aaPredicted RBP13.28□□□□□ -0.28
RAB5C-209ENST00000552162 HOPXQ9BPY8 73 aaPredicted RBP13.28□□□□□ -0.28
RAB5C-209ENST00000552162 PAPOLGQ9BWT3 736 aaKnown RBP13.28□□□□□ -0.28
RAB5C-209ENST00000552162 MMP28Q9H239 520 aa13.28□□□□□ -0.28
RAB5C-209ENST00000552162 SF3B6Q9Y3B4 125 aaKnown RBP13.28□□□□□ -0.28
RAB5C-209ENST00000552162 hCG_38984A0A1B0GV85 526 aa13.27□□□□□ -0.29
RAB5C-209ENST00000552162 GADD45GO95257 159 aa13.27□□□□□ -0.29
RAB5C-209ENST00000552162 ANXA2P07355 339 aaKnown RBP13.27□□□□□ -0.29
RAB5C-209ENST00000552162 PAX6P26367 422 aa13.27□□□□□ -0.29
RAB5C-209ENST00000552162 POU1F1P28069 291 aa13.27□□□□□ -0.29
RAB5C-209ENST00000552162 CX3CR1P49238 355 aa13.27□□□□□ -0.29
RAB5C-209ENST00000552162 ENTPD1P49961 510 aa13.27□□□□□ -0.29
RAB5C-209ENST00000552162 CAV3P56539 151 aa13.27□□□□□ -0.29
RAB5C-209ENST00000552162 MXRA7P84157 204 aa13.27□□□□□ -0.29
RAB5C-209ENST00000552162 SPIBQ01892 262 aa13.27□□□□□ -0.29
RAB5C-209ENST00000552162 AANATQ16613 207 aa13.27□□□□□ -0.29
RAB5C-209ENST00000552162 CGB2Q6NT52 195 aa13.27□□□□□ -0.29
RAB5C-209ENST00000552162 C8orf82Q6P1X6 216 aaPredicted RBP13.27□□□□□ -0.29
RAB5C-209ENST00000552162 OR5D13Q8NGL4 314 aa13.27□□□□□ -0.29
RAB5C-209ENST00000552162 OR10Z1Q8NGY1 313 aa13.27□□□□□ -0.29
RAB5C-209ENST00000552162 ANGPTL6Q8NI99 470 aa13.27□□□□□ -0.29
RAB5C-209ENST00000552162 R3HDM4Q96D70 268 aa13.27□□□□□ -0.29
RAB5C-209ENST00000552162 MED30Q96HR3 178 aa13.27□□□□□ -0.29
RAB5C-209ENST00000552162 MEGF9Q9H1U4 602 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms