RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 TCEAL4Q96EI5 215 aa5.09□□□□□ -1.59
VPS29-210ENST00000552130 FAM210BQ96KR6 192 aa5.09□□□□□ -1.59
VPS29-210ENST00000552130 TM2D1Q9BX74 207 aa5.09□□□□□ -1.59
VPS29-210ENST00000552130 ABCC13Q9NSE7 274 aa5.09□□□□□ -1.59
VPS29-210ENST00000552130 KCNIP1Q9NZI2 227 aa5.09□□□□□ -1.59
VPS29-210ENST00000552130 COMMD9Q9P000 198 aa5.09□□□□□ -1.59
VPS29-210ENST00000552130 VPREB3Q9UKI3 123 aa5.09□□□□□ -1.59
VPS29-210ENST00000552130 C14orf166Q9Y224 244 aaKnown RBP5.09□□□□□ -1.59
VPS29-210ENST00000552130 A0A1W2PQ67 120 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 OR11H12B2RN74 326 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 NPIPB9F8W1W9 429 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 TSTD3H0UI37 97 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 PI15O43692 258 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 SCRG1O75711 98 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 CNMDO75829 334 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 VENTXO95231 258 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 HAND1O96004 215 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 NGFP01138 241 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 IGHV3-9P01782 118 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 PGA4P0DJD7 388 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 PGA3P0DJD8 388 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 HSD17B1P14061 328 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 PAX1P15863 534 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 AKR1C4P17516 323 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 IGFBP5P24593 272 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 OPRL1P41146 370 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 DVL1P1P54792 670 aaPredicted RBP5.08□□□□□ -1.6
VPS29-210ENST00000552130 RAB25P57735 213 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 RBX1P62877 108 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 PSPHP78330 225 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 ZNF45Q02386 682 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 SLC10A7Q0GE19 358 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 OR1Q1Q15612 314 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 TFDP3Q5H9I0 405 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 OR2T5Q6IEZ7 315 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 SPSB3Q6PJ21 355 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 WDR74Q6RFH5 385 aaPredicted RBP5.08□□□□□ -1.6
VPS29-210ENST00000552130 NPSR1Q6W5P4 371 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 CYHR1Q6ZMK1 362 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 SH2D5Q6ZV89 423 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 Q6ZVH6 145 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 RAB43Q86YS6 212 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 SKA3Q8IX90 412 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 SLC34A3Q8N130 599 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 TMEM161BQ8NDZ6 487 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 OR11H1Q8NG94 326 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 OR52E4Q8NGH9 312 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 OR10G8Q8NGN5 311 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 OR2T29Q8NH02 315 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 OR11H2Q8NH07 326 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 PIK3IP1Q96FE7 263 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 AIF1LQ9BQI0 150 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 KRTAP2-2Q9BYT5 123 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 PITPNM3Q9BZ71 974 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 IL1RAPQ9NPH3 570 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 KCNJ16Q9NPI9 418 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 TMEM9BQ9NQ34 198 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 DDIT4Q9NX09 232 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 FBXO7Q9Y3I1 522 aa5.08□□□□□ -1.6
VPS29-210ENST00000552130 FANCIQ9NVI1 1328 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 IGKV1D-8A0A087WSZ0 117 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 ERVV-2B6SEH9 535 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 ZNF878C9JN71 531 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 E9PLD3 99 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 ARPC5O15511 151 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 PLIN3O60664 434 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 SMIM24O75264 130 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 SUPT3HO75486 399 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 SOX14O95416 240 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 TTC4O95801 387 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 TSHBP01222 138 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 PPBPP02775 128 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 SEMG1P04279 462 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 EDN1P05305 212 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 PGA5P0DJD9 388 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 SCGB1A1P11684 91 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 SELEP16581 610 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 PRKACGP22612 351 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 TAS2R41P59536 307 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 BTN3A2P78410 334 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 EDDM3AQ14507 147 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 CLEC12BQ2HXU8 276 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 LRRC26Q2I0M4 334 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 TMEM30BQ3MIR4 351 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 FAM71E1Q6IPT2 247 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 ZNF66Q6ZN08 573 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 FAM231DQ6ZW35 169 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 OLIG3Q7RTU3 272 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 P2RY8Q86VZ1 359 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 GAPTQ8N292 157 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 NATD1Q8N6N6 113 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 ZNF491Q8N8L2 437 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 OR52E2Q8NGJ4 325 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 OR51G1Q8NGK1 321 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 MPLKIPQ8TAP9 179 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 ZFAND1Q8TCF1 268 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 EEF1AKMT1Q8WVE0 214 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 KCTD4Q8WVF5 259 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 PGLYRP3Q96LB9 341 aa5.07□□□□□ -1.6
VPS29-210ENST00000552130 ZNF717Q9BY31 904 aaPredicted RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms