RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 CHST5Q9GZS9 411 aa24.68■■□□□ 1.54
BRF1-213ENST00000548421 ZCCHC4Q9H5U6 513 aa24.68■■□□□ 1.54
BRF1-213ENST00000548421 COL12A1Q99715 3063 aa24.67■■□□□ 1.54
BRF1-213ENST00000548421 PRSS44E7EML9 344 aa24.67■■□□□ 1.54
BRF1-213ENST00000548421 CDRT1O95170 752 aa24.67■■□□□ 1.54
BRF1-213ENST00000548421 ZNF250P15622 560 aa24.67■■□□□ 1.54
BRF1-213ENST00000548421 PPP3R1P63098 170 aa24.67■■□□□ 1.54
BRF1-213ENST00000548421 UTS2BQ765I0 119 aa24.67■■□□□ 1.54
BRF1-213ENST00000548421 SYNPRQ8TBG9 265 aa24.67■■□□□ 1.54
BRF1-213ENST00000548421 ZNF442Q9H7R0 627 aa24.67■■□□□ 1.54
BRF1-213ENST00000548421 FZR1Q9UM11 496 aa24.67■■□□□ 1.54
BRF1-213ENST00000548421 TRIM64BA6NI03 449 aa24.66■■□□□ 1.54
BRF1-213ENST00000548421 IL1AP01583 271 aa24.66■■□□□ 1.54
BRF1-213ENST00000548421 KITLGP21583 273 aa24.66■■□□□ 1.54
BRF1-213ENST00000548421 LOXP28300 417 aaPredicted RBP24.66■■□□□ 1.54
BRF1-213ENST00000548421 TPRA1Q86W33 373 aa24.66■■□□□ 1.54
BRF1-213ENST00000548421 BHLHE23Q8NDY6 225 aa24.66■■□□□ 1.54
BRF1-213ENST00000548421 KCNN3Q9UGI6 736 aa24.66■■□□□ 1.54
BRF1-213ENST00000548421 PURGQ9UJV8 347 aaKnown RBP24.66■■□□□ 1.54
BRF1-213ENST00000548421 CMAHPQ9Y471 501 aa24.66■■□□□ 1.54
BRF1-213ENST00000548421 IQCF6A8MYZ5 107 aa24.65■■□□□ 1.54
BRF1-213ENST00000548421 MSMPQ1L6U9 139 aa24.65■■□□□ 1.54
BRF1-213ENST00000548421 CLVS2Q5SYC1 327 aa24.65■■□□□ 1.54
BRF1-213ENST00000548421 TMEM42Q69YG0 159 aa24.65■■□□□ 1.54
BRF1-213ENST00000548421 ZNF529Q6P280 563 aa24.65■■□□□ 1.54
BRF1-213ENST00000548421 KRT74Q7RTS7 529 aa24.65■■□□□ 1.54
BRF1-213ENST00000548421 OR13C9Q8NGT0 318 aa24.65■■□□□ 1.54
BRF1-213ENST00000548421 HS3ST6Q96QI5 342 aa24.65■■□□□ 1.54
BRF1-213ENST00000548421 TMEM204Q9BSN7 226 aa24.65■■□□□ 1.54
BRF1-213ENST00000548421 RHBDD3Q9Y3P4 386 aa24.65■■□□□ 1.54
BRF1-213ENST00000548421 A0A1W2PPW3 197 aa24.64■■□□□ 1.54
BRF1-213ENST00000548421 SULT1B1O43704 296 aa24.64■■□□□ 1.54
BRF1-213ENST00000548421 CST4P01036 141 aa24.64■■□□□ 1.54
BRF1-213ENST00000548421 MAS1P04201 325 aa24.64■■□□□ 1.54
BRF1-213ENST00000548421 RAB3AP20336 220 aa24.64■■□□□ 1.54
BRF1-213ENST00000548421 MXD1Q05195 221 aa24.64■■□□□ 1.54
BRF1-213ENST00000548421 TMEM255AQ5JRV8 349 aa24.64■■□□□ 1.54
BRF1-213ENST00000548421 LRRTM1Q86UE6 522 aa24.64■■□□□ 1.54
BRF1-213ENST00000548421 OR5AS1Q8N127 324 aa24.64■■□□□ 1.54
BRF1-213ENST00000548421 OR1M1Q8NGA1 313 aa24.64■■□□□ 1.54
BRF1-213ENST00000548421 PIGTQ969N2 578 aa24.64■■□□□ 1.54
BRF1-213ENST00000548421 PAPOLGQ9BWT3 736 aaKnown RBP24.64■■□□□ 1.54
BRF1-213ENST00000548421 MRPL15Q9P015 296 aaKnown RBP24.64■■□□□ 1.54
BRF1-213ENST00000548421 ANKRD30BLA7E2S9 258 aa24.64■■□□□ 1.53
BRF1-213ENST00000548421 PDCD5O14737 125 aa24.64■■□□□ 1.53
BRF1-213ENST00000548421 RPS19P39019 145 aaKnown RBP24.64■■□□□ 1.53
BRF1-213ENST00000548421 KLF3P57682 345 aaPredicted RBP24.64■■□□□ 1.53
BRF1-213ENST00000548421 OR51A2Q8NGJ7 313 aa24.64■■□□□ 1.53
BRF1-213ENST00000548421 UBASH3BQ8TF42 649 aa24.64■■□□□ 1.53
BRF1-213ENST00000548421 PIGCQ92535 297 aa24.64■■□□□ 1.53
BRF1-213ENST00000548421 MRPL24Q96A35 216 aaKnown RBP24.64■■□□□ 1.53
BRF1-213ENST00000548421 DUSP13Q9UII6 198 aa24.64■■□□□ 1.53
BRF1-213ENST00000548421 IGLV3-9A0A075B6K5 115 aa24.63■■□□□ 1.53
BRF1-213ENST00000548421 TIMM8AO60220 97 aaPredicted RBP24.63■■□□□ 1.53
BRF1-213ENST00000548421 GMDSO60547 372 aa24.63■■□□□ 1.53
BRF1-213ENST00000548421 NRASP01111 189 aa24.63■■□□□ 1.53
BRF1-213ENST00000548421 IGHV3-13P01766 116 aa24.63■■□□□ 1.53
BRF1-213ENST00000548421 RAB3BP20337 219 aa24.63■■□□□ 1.53
BRF1-213ENST00000548421 SELENOVP59797 346 aa24.63■■□□□ 1.53
BRF1-213ENST00000548421 DAZAP2Q15038 168 aaPredicted RBP24.63■■□□□ 1.53
BRF1-213ENST00000548421 ALKBH6Q3KRA9 238 aa24.63■■□□□ 1.53
BRF1-213ENST00000548421 TECTBQ96PL2 329 aa24.63■■□□□ 1.53
BRF1-213ENST00000548421 SPOCK3Q9BQ16 436 aa24.63■■□□□ 1.53
BRF1-213ENST00000548421 TPK1Q9H3S4 243 aa24.63■■□□□ 1.53
BRF1-213ENST00000548421 GPR173Q9NS66 373 aa24.63■■□□□ 1.53
BRF1-213ENST00000548421 TENM4Q6N022 2769 aa24.62■■□□□ 1.53
BRF1-213ENST00000548421 VSTM5A8MXK1 200 aa24.62■■□□□ 1.53
BRF1-213ENST00000548421 LILRA1O75019 489 aa24.62■■□□□ 1.53
BRF1-213ENST00000548421 ALX3O95076 343 aa24.62■■□□□ 1.53
BRF1-213ENST00000548421 PLAUP00749 431 aa24.62■■□□□ 1.53
BRF1-213ENST00000548421 CLEC2LP0C7M8 214 aa24.62■■□□□ 1.53
BRF1-213ENST00000548421 ADRA2CP18825 462 aa24.62■■□□□ 1.53
BRF1-213ENST00000548421 UBE2V2Q15819 145 aa24.62■■□□□ 1.53
BRF1-213ENST00000548421 LRP11Q86VZ4 500 aa24.62■■□□□ 1.53
BRF1-213ENST00000548421 TMEM138Q9NPI0 162 aa24.62■■□□□ 1.53
BRF1-213ENST00000548421 AK6Q9Y3D8 172 aaKnown RBP24.62■■□□□ 1.53
BRF1-213ENST00000548421 MEGF11A6BM72 1044 aa24.61■■□□□ 1.53
BRF1-213ENST00000548421 ANXA2P2A6NMY6 339 aa24.61■■□□□ 1.53
BRF1-213ENST00000548421 ZNF850A8MQ14 1090 aa24.61■■□□□ 1.53
BRF1-213ENST00000548421 E7EQL1 145 aa24.61■■□□□ 1.53
BRF1-213ENST00000548421 ERCC1P07992 297 aaPredicted RBP24.61■■□□□ 1.53
BRF1-213ENST00000548421 ATF1P18846 271 aa24.61■■□□□ 1.53
BRF1-213ENST00000548421 BDKRB2P30411 391 aa24.61■■□□□ 1.53
BRF1-213ENST00000548421 PRDX4Q13162 271 aa24.61■■□□□ 1.53
BRF1-213ENST00000548421 CNN3Q15417 329 aaKnown RBP24.61■■□□□ 1.53
BRF1-213ENST00000548421 CNPY1Q3B7I2 92 aa24.61■■□□□ 1.53
BRF1-213ENST00000548421 CEP78Q5JTW2 689 aa24.61■■□□□ 1.53
BRF1-213ENST00000548421 NKAIN3Q8N8D7 197 aa24.61■■□□□ 1.53
BRF1-213ENST00000548421 OR8G5Q8NG78 346 aa24.61■■□□□ 1.53
BRF1-213ENST00000548421 DYNC2LI1Q8TCX1 351 aa24.61■■□□□ 1.53
BRF1-213ENST00000548421 SYT3Q9BQG1 590 aa24.61■■□□□ 1.53
BRF1-213ENST00000548421 SLC30A2Q9BRI3 323 aa24.61■■□□□ 1.53
BRF1-213ENST00000548421 DCUN1D5Q9BTE7 237 aa24.61■■□□□ 1.53
BRF1-213ENST00000548421 MRPL37Q9BZE1 423 aaKnown RBP24.61■■□□□ 1.53
BRF1-213ENST00000548421 GPR160Q9UJ42 338 aa24.61■■□□□ 1.53
BRF1-213ENST00000548421 SPTAN1Q13813 2472 aaKnown RBP24.61■■□□□ 1.53
BRF1-213ENST00000548421 IGKV1-9A0A0C4DH69 117 aa24.6■■□□□ 1.53
BRF1-213ENST00000548421 OR4A8P0C604 315 aa24.6■■□□□ 1.53
BRF1-213ENST00000548421 OCMP0CE72 109 aaPredicted RBP24.6■■□□□ 1.53
BRF1-213ENST00000548421 ADIPOQQ15848 244 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms