RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 RPL4P36578 427 aaKnown RBP7.02□□□□□ -1.28
UBR1-202ENST00000546274 ACAA2P42765 397 aaKnown RBP7.02□□□□□ -1.28
UBR1-202ENST00000546274 CDC34P49427 236 aaPredicted RBP7.02□□□□□ -1.28
UBR1-202ENST00000546274 EMDP50402 254 aa7.02□□□□□ -1.28
UBR1-202ENST00000546274 POLR2HP52434 150 aaKnown RBP7.02□□□□□ -1.28
UBR1-202ENST00000546274 RUNX3Q13761 415 aa7.02□□□□□ -1.28
UBR1-202ENST00000546274 GGTLC2Q14390 218 aa7.02□□□□□ -1.28
UBR1-202ENST00000546274 LINC00114Q6XXX2 140 aa7.02□□□□□ -1.28
UBR1-202ENST00000546274 SLC16A14Q7RTX9 510 aa7.02□□□□□ -1.28
UBR1-202ENST00000546274 OVCH1Q7RTY7 1134 aa7.02□□□□□ -1.28
UBR1-202ENST00000546274 ZNF100Q8IYN0 542 aa7.02□□□□□ -1.28
UBR1-202ENST00000546274 GABRG1Q8N1C3 465 aa7.02□□□□□ -1.28
UBR1-202ENST00000546274 HOXB13Q92826 284 aaPredicted RBP7.02□□□□□ -1.28
UBR1-202ENST00000546274 CTHRC1Q96CG8 243 aa7.02□□□□□ -1.28
UBR1-202ENST00000546274 NUDT11Q96G61 164 aa7.02□□□□□ -1.28
UBR1-202ENST00000546274 SHDQ96IW2 340 aa7.02□□□□□ -1.28
UBR1-202ENST00000546274 YPEL4Q96NS1 127 aa7.02□□□□□ -1.28
UBR1-202ENST00000546274 CNTNAP3Q9BZ76 1288 aa7.02□□□□□ -1.28
UBR1-202ENST00000546274 CACNA1CQ13936 2221 aa7.02□□□□□ -1.28
UBR1-202ENST00000546274 ARHGEF17Q96PE2 2063 aaPredicted RBP7.02□□□□□ -1.29
UBR1-202ENST00000546274 HEATR5AQ86XA9 2040 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 A0A1B0GWA3 101 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 LNP1A1A4G5 178 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 PIN1P1O15428 100 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 PRH1P02810 166 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 MAS1P04201 325 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 HIST1H1CP16403 213 aaKnown RBP7.02□□□□□ -1.29
UBR1-202ENST00000546274 RAB7AP51149 207 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 LTBQ06643 244 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 AADACL3Q5VUY0 350 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 TMEM108Q6UXF1 575 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 SLC35E3Q7Z769 313 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 COX18Q8N8Q8 333 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 CDRT4Q8N9R6 151 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 SUMF2Q8NBJ7 301 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 PLPP5Q8NEB5 264 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 MIB2Q96AX9 1013 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 ZMYND19Q96E35 227 aaPredicted RBP7.02□□□□□ -1.29
UBR1-202ENST00000546274 LMF1Q96S06 567 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 TP53RKQ96S44 253 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 RNF126Q9BV68 326 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 POTEKPQ9BYX7 375 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 CST11Q9H112 138 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 SLC35B3Q9H1N7 401 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 PLA2G2EQ9NZK7 142 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 OR5AC2Q9NZP5 309 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 HEBP2Q9Y5Z4 205 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 TRIOBPQ9H2D6 2365 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 SPTBP11277 2137 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 A0A087WV48 116 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 ZNF705FA8MVS1 300 aaPredicted RBP7.02□□□□□ -1.29
UBR1-202ENST00000546274 B3GALT2O43825 422 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 DOK2O60496 412 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 C1QL1O75973 258 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 IGKV1D-16P01601 117 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 ZNF705DP0CH99 300 aaPredicted RBP7.02□□□□□ -1.29
UBR1-202ENST00000546274 ZNF705BP0CI00 300 aaPredicted RBP7.02□□□□□ -1.29
UBR1-202ENST00000546274 PNLIPP16233 465 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 KLK2P20151 261 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 CHRNB4P30926 498 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 PRSS3P35030 304 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 SNCAP37840 140 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 LSSP48449 732 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 EFNB2P52799 333 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 S100A10P60903 97 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 FAM53BQ14153 422 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 ABLIM2Q6H8Q1 611 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 GALNTL5Q7Z4T8 443 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 APCDD1LQ8NCL9 501 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 RPS4Y2Q8TD47 263 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 OR1E3Q8WZA6 343 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 RAB39BQ96DA2 213 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 PHB2Q99623 299 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 C1orf198Q9H425 327 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 DNAJB12Q9NXW2 375 aaKnown RBP7.02□□□□□ -1.29
UBR1-202ENST00000546274 PRR13Q9NZ81 148 aa7.02□□□□□ -1.29
UBR1-202ENST00000546274 TRBV11-1A0A0K0K1C0 115 aa7.01□□□□□ -1.29
UBR1-202ENST00000546274 PRR32B1ATL7 298 aa7.01□□□□□ -1.29
UBR1-202ENST00000546274 FBXO45P0C2W1 286 aa7.01□□□□□ -1.29
UBR1-202ENST00000546274 CHATP28329 748 aa7.01□□□□□ -1.29
UBR1-202ENST00000546274 GABRA3P34903 492 aa7.01□□□□□ -1.29
UBR1-202ENST00000546274 NAA10P41227 235 aaPredicted RBP7.01□□□□□ -1.29
UBR1-202ENST00000546274 SULT1A2P50226 295 aa7.01□□□□□ -1.29
UBR1-202ENST00000546274 GPM6BQ13491 265 aa7.01□□□□□ -1.29
UBR1-202ENST00000546274 FAHD2BQ6P2I3 314 aaPredicted RBP7.01□□□□□ -1.29
UBR1-202ENST00000546274 UNQ9370/PRO34162Q6UXP9 181 aa7.01□□□□□ -1.29
UBR1-202ENST00000546274 CMTM1Q8IZ96 169 aa7.01□□□□□ -1.29
UBR1-202ENST00000546274 SYS1Q8N2H4 156 aa7.01□□□□□ -1.29
UBR1-202ENST00000546274 OR52E2Q8NGJ4 325 aa7.01□□□□□ -1.29
UBR1-202ENST00000546274 OR14C36Q8NHC7 312 aa7.01□□□□□ -1.29
UBR1-202ENST00000546274 ZNF563Q8TA94 476 aa7.01□□□□□ -1.29
UBR1-202ENST00000546274 ZPLD1Q8TCW7 415 aa7.01□□□□□ -1.29
UBR1-202ENST00000546274 FAHD2AQ96GK7 314 aa7.01□□□□□ -1.29
UBR1-202ENST00000546274 FAM210BQ96KR6 192 aa7.01□□□□□ -1.29
UBR1-202ENST00000546274 SYT3Q9BQG1 590 aa7.01□□□□□ -1.29
UBR1-202ENST00000546274 ALKBH7Q9BT30 221 aaPredicted RBP7.01□□□□□ -1.29
UBR1-202ENST00000546274 LYRM4Q9HD34 91 aa7.01□□□□□ -1.29
UBR1-202ENST00000546274 PARP11Q9NR21 331 aa7.01□□□□□ -1.29
UBR1-202ENST00000546274 PITPNC1Q9UKF7 332 aa7.01□□□□□ -1.29
UBR1-202ENST00000546274 RAB22AQ9UL26 194 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms