RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 A1L4Q6 167 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 OR6C6A6NF89 314 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 SIRPB1O00241 398 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 GPR31O00270 319 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 RTP5Q14D33 572 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 LGALSLQ3ZCW2 172 aaPredicted RBP7.72□□□□□ -1.17
CLIP1-218ENST00000545889 AADACL4Q5VUY2 407 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 DOK3Q7L591 496 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 MOB3BQ86TA1 216 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 ZNF441Q8N8Z8 693 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 ATF6BQ99941 703 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 MED17Q9NVC6 651 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 WDR87Q6ZQQ6 2873 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 MFSD2BA6NFX1 497 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 CLDN1O95832 211 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 CSF1P09603 554 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 PRR35P0CG20 571 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 ITGAMP11215 1152 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 PTBP1P26599 531 aaKnown RBP eCLIP7.72□□□□□ -1.17
CLIP1-218ENST00000545889 HTR2CP28335 458 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 CLDN20P56880 219 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 FOXL2P58012 376 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 OR2B11Q5JQS5 317 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 RNLSQ5VYX0 342 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 H3F3CQ6NXT2 135 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 CLEC2AQ6UVW9 174 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 CLEC9AQ6UXN8 241 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 CMTM2Q8TAZ6 248 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 SAT2Q96F10 170 aaPredicted RBP7.72□□□□□ -1.17
CLIP1-218ENST00000545889 ADAT1Q9BUB4 502 aaKnown RBP7.72□□□□□ -1.17
CLIP1-218ENST00000545889 PRO1933Q9H354 126 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 GORASP2Q9H8Y8 452 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 FN3KRPQ9HA64 309 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 MYOZ1Q9NP98 299 aaPredicted RBP7.72□□□□□ -1.17
CLIP1-218ENST00000545889 PSORS1C1Q9UIG5 152 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 TINAGQ9UJW2 476 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 HAX1O00165 279 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 AIPO00170 330 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 TERTO14746 1132 aaKnown RBP7.72□□□□□ -1.17
CLIP1-218ENST00000545889 UBL3O95164 117 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 THBS1P07996 1170 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 HOXB5P09067 269 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 CXCL3P19876 107 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 ETV6P41212 452 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 CCR6P51684 374 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 LTBQ06643 244 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 CSRP2Q16527 193 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 ARHGAP11BQ3KRB8 267 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 HEPHL1Q6MZM0 1159 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 DTD1Q8TEA8 209 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 MRPS24Q96EL2 167 aaKnown RBP7.72□□□□□ -1.17
CLIP1-218ENST00000545889 SPSB2Q99619 263 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 COMMD5Q9GZQ3 224 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 PILRBQ9UKJ0 227 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 IGKV1-8A0A0C4DH67 115 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 A0A1W2PS29 197 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 GOSR1O95249 250 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 LAP3P28838 519 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 ZFP36L2P47974 494 aaKnown RBP7.72□□□□□ -1.17
CLIP1-218ENST00000545889 TAS2R30P59541 319 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 RAP2BP61225 183 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 IL13RA1P78552 427 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 MRPS10P82664 201 aaKnown RBP7.72□□□□□ -1.17
CLIP1-218ENST00000545889 ZNF79Q15937 498 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 PRAMEF5Q5TYX0 476 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 PRAMEF6Q5VXH4 476 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 SPNS3Q6ZMD2 512 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 MRGPREQ86SM8 312 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 PXT1Q8NFP0 134 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 FCRL1Q96LA6 429 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 CHODLQ9H9P2 273 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 A4GALTQ9NPC4 353 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 ASIC5Q9NY37 505 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 TRAPPC4Q9Y296 219 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 TRGV10A0A0A0MS01 117 aa7.71□□□□□ -1.17
CLIP1-218ENST00000545889 PLA2G10O15496 165 aa7.71□□□□□ -1.17
CLIP1-218ENST00000545889 FCMRO60667 390 aa7.71□□□□□ -1.17
CLIP1-218ENST00000545889 AKAIN1P0CW23 69 aa7.71□□□□□ -1.17
CLIP1-218ENST00000545889 CNR1P21554 472 aa7.71□□□□□ -1.17
CLIP1-218ENST00000545889 ABCD3P28288 659 aa7.71□□□□□ -1.17
CLIP1-218ENST00000545889 PTGFRP43088 359 aa7.71□□□□□ -1.17
CLIP1-218ENST00000545889 OR2B8PP59922 312 aa7.71□□□□□ -1.17
CLIP1-218ENST00000545889 ADAM5Q6NVV9 412 aa7.71□□□□□ -1.17
CLIP1-218ENST00000545889 GDPGP1Q6ZNW5 385 aa7.71□□□□□ -1.17
CLIP1-218ENST00000545889 ANKRD37Q7Z713 158 aa7.71□□□□□ -1.17
CLIP1-218ENST00000545889 OR2AK2Q8NG84 335 aa7.71□□□□□ -1.17
CLIP1-218ENST00000545889 OR13G1Q8NGZ3 307 aa7.71□□□□□ -1.17
CLIP1-218ENST00000545889 SCARB1Q8WTV0 552 aa7.71□□□□□ -1.17
CLIP1-218ENST00000545889 EXTL1Q92935 676 aa7.71□□□□□ -1.17
CLIP1-218ENST00000545889 SLAMF6Q96DU3 332 aa7.71□□□□□ -1.17
CLIP1-218ENST00000545889 POM121Q96HA1 1249 aa7.71□□□□□ -1.17
CLIP1-218ENST00000545889 HES4Q9HCC6 221 aa7.71□□□□□ -1.17
CLIP1-218ENST00000545889 RPS10P5Q9NQ39 176 aa7.71□□□□□ -1.17
CLIP1-218ENST00000545889 ZNF391Q9UJN7 358 aa7.71□□□□□ -1.17
CLIP1-218ENST00000545889 PTPRSQ13332 1948 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 C16orf97H3BN30 126 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 NKX2-8O15522 239 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 SNAPINO95295 136 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 MT-ND4P03905 459 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 SPINK2P20155 84 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms