RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 CHCHD6Q9BRQ6 235 aa13.74□□□□□ -0.21
PRPF40A-212ENST00000545856 OR51E2Q9H255 320 aa13.74□□□□□ -0.21
PRPF40A-212ENST00000545856 EXOSC4Q9NPD3 245 aaKnown RBP13.74□□□□□ -0.21
PRPF40A-212ENST00000545856 SNTG1Q9NSN8 517 aa13.74□□□□□ -0.21
PRPF40A-212ENST00000545856 PURGQ9UJV8 347 aaKnown RBP13.74□□□□□ -0.21
PRPF40A-212ENST00000545856 PIGLQ9Y2B2 252 aa13.74□□□□□ -0.21
PRPF40A-212ENST00000545856 ATP23Q9Y6H3 246 aa13.74□□□□□ -0.21
PRPF40A-212ENST00000545856 CEPT1Q9Y6K0 416 aa13.74□□□□□ -0.21
PRPF40A-212ENST00000545856 DOPEY2Q9Y3R5 2298 aa13.74□□□□□ -0.21
PRPF40A-212ENST00000545856 ANKRD61A6NGH8 418 aa13.73□□□□□ -0.21
PRPF40A-212ENST00000545856 A6NHS1 94 aa13.73□□□□□ -0.21
PRPF40A-212ENST00000545856 B9A039 149 aa13.73□□□□□ -0.21
PRPF40A-212ENST00000545856 PDCD5O14737 125 aa13.73□□□□□ -0.21
PRPF40A-212ENST00000545856 SIAH2O43255 324 aa13.73□□□□□ -0.21
PRPF40A-212ENST00000545856 SPOCK1Q08629 439 aa13.73□□□□□ -0.21
PRPF40A-212ENST00000545856 PSG7Q13046 419 aa13.73□□□□□ -0.21
PRPF40A-212ENST00000545856 CTF1Q16619 201 aa13.73□□□□□ -0.21
PRPF40A-212ENST00000545856 OR8G5Q8NG78 346 aa13.73□□□□□ -0.21
PRPF40A-212ENST00000545856 OR10AC1Q8NH08 325 aa13.73□□□□□ -0.21
PRPF40A-212ENST00000545856 ISOC1Q96CN7 298 aa13.73□□□□□ -0.21
PRPF40A-212ENST00000545856 ZCCHC4Q9H5U6 513 aa13.73□□□□□ -0.21
PRPF40A-212ENST00000545856 TCF7L1Q9HCS4 588 aa13.73□□□□□ -0.21
PRPF40A-212ENST00000545856 RSL24D1Q9UHA3 163 aaKnown RBP13.73□□□□□ -0.21
PRPF40A-212ENST00000545856 RAI1Q7Z5J4 1906 aaPredicted RBP13.73□□□□□ -0.21
PRPF40A-212ENST00000545856 LOC100506127A0A0U1RQW1 187 aa13.72□□□□□ -0.21
PRPF40A-212ENST00000545856 PLSCR5A0PG75 271 aa13.72□□□□□ -0.21
PRPF40A-212ENST00000545856 ANXA2P2A6NMY6 339 aa13.72□□□□□ -0.21
PRPF40A-212ENST00000545856 SULT1B1O43704 296 aa13.72□□□□□ -0.21
PRPF40A-212ENST00000545856 GMDSO60547 372 aa13.72□□□□□ -0.21
PRPF40A-212ENST00000545856 IL1AP01583 271 aa13.72□□□□□ -0.21
PRPF40A-212ENST00000545856 ALDOBP05062 364 aa13.72□□□□□ -0.21
PRPF40A-212ENST00000545856 ADH4P08319 380 aa13.72□□□□□ -0.21
PRPF40A-212ENST00000545856 COX6B1P14854 86 aa13.72□□□□□ -0.21
PRPF40A-212ENST00000545856 IGFBP3P17936 291 aaPredicted RBP13.72□□□□□ -0.21
PRPF40A-212ENST00000545856 SRMP19623 302 aa13.72□□□□□ -0.21
PRPF40A-212ENST00000545856 RAB3AP20336 220 aa13.72□□□□□ -0.21
PRPF40A-212ENST00000545856 PRKACBP22694 351 aa13.72□□□□□ -0.21
PRPF40A-212ENST00000545856 ACKR3P25106 362 aa13.72□□□□□ -0.21
PRPF40A-212ENST00000545856 USP43Q70EL4 1123 aa13.72□□□□□ -0.21
PRPF40A-212ENST00000545856 OR13G1Q8NGZ3 307 aa13.72□□□□□ -0.21
PRPF40A-212ENST00000545856 FBXW5Q969U6 566 aa13.72□□□□□ -0.21
PRPF40A-212ENST00000545856 FGGYQ96C11 551 aa13.72□□□□□ -0.21
PRPF40A-212ENST00000545856 FOXRED1Q96CU9 486 aaPredicted RBP13.72□□□□□ -0.21
PRPF40A-212ENST00000545856 PLK3Q9H4B4 646 aa13.72□□□□□ -0.21
PRPF40A-212ENST00000545856 NOX4Q9NPH5 578 aa13.72□□□□□ -0.21
PRPF40A-212ENST00000545856 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.71□□□□□ -0.21
PRPF40A-212ENST00000545856 C5orf63A6NC05 138 aa13.71□□□□□ -0.21
PRPF40A-212ENST00000545856 DPPA5A6NC42 116 aa13.71□□□□□ -0.21
PRPF40A-212ENST00000545856 OR5B21A6NL26 309 aa13.71□□□□□ -0.21
PRPF40A-212ENST00000545856 PYCARD-AS1I3L0S3 204 aa13.71□□□□□ -0.21
PRPF40A-212ENST00000545856 TIMM8AO60220 97 aaPredicted RBP13.71□□□□□ -0.21
PRPF40A-212ENST00000545856 BMP4P12644 408 aa13.71□□□□□ -0.21
PRPF40A-212ENST00000545856 ANOS1P23352 680 aa13.71□□□□□ -0.21
PRPF40A-212ENST00000545856 CALRP27797 417 aaKnown RBP13.71□□□□□ -0.21
PRPF40A-212ENST00000545856 CFPP27918 469 aa13.71□□□□□ -0.21
PRPF40A-212ENST00000545856 SERPINF1P36955 418 aa13.71□□□□□ -0.21
PRPF40A-212ENST00000545856 SOX2P48431 317 aa13.71□□□□□ -0.21
PRPF40A-212ENST00000545856 CAPZA1P52907 286 aa13.71□□□□□ -0.21
PRPF40A-212ENST00000545856 TLE4Q04727 773 aa13.71□□□□□ -0.21
PRPF40A-212ENST00000545856 TNK1Q13470 666 aa13.71□□□□□ -0.21
PRPF40A-212ENST00000545856 HLXQ14774 488 aaPredicted RBP13.71□□□□□ -0.21
PRPF40A-212ENST00000545856 ADIPOQQ15848 244 aa13.71□□□□□ -0.21
PRPF40A-212ENST00000545856 C22orf42Q6IC83 251 aa13.71□□□□□ -0.21
PRPF40A-212ENST00000545856 OR13C5Q8NGS8 318 aa13.71□□□□□ -0.21
PRPF40A-212ENST00000545856 UBASH3BQ8TF42 649 aa13.71□□□□□ -0.21
PRPF40A-212ENST00000545856 ADAT3Q96EY9 351 aaPredicted RBP13.71□□□□□ -0.21
PRPF40A-212ENST00000545856 C14orf79Q96F83 325 aa13.71□□□□□ -0.21
PRPF40A-212ENST00000545856 SLC30A2Q9BRI3 323 aa13.71□□□□□ -0.21
PRPF40A-212ENST00000545856 OR51B6Q9H340 312 aa13.71□□□□□ -0.21
PRPF40A-212ENST00000545856 POFUT1Q9H488 388 aa13.71□□□□□ -0.21
PRPF40A-212ENST00000545856 TMEM138Q9NPI0 162 aa13.71□□□□□ -0.21
PRPF40A-212ENST00000545856 CISD1Q9NZ45 108 aaKnown RBP13.71□□□□□ -0.21
PRPF40A-212ENST00000545856 ZDHHC8Q9ULC8 765 aa13.71□□□□□ -0.21
PRPF40A-212ENST00000545856 HRNRQ86YZ3 2850 aaPredicted RBP13.71□□□□□ -0.21
PRPF40A-212ENST00000545856 TRIM64BA6NI03 449 aa13.71□□□□□ -0.22
PRPF40A-212ENST00000545856 E7EQL1 145 aa13.71□□□□□ -0.22
PRPF40A-212ENST00000545856 MAGEB3O15480 346 aa13.71□□□□□ -0.22
PRPF40A-212ENST00000545856 CLDN1O95832 211 aa13.71□□□□□ -0.22
PRPF40A-212ENST00000545856 FAHP16930 419 aa13.71□□□□□ -0.22
PRPF40A-212ENST00000545856 FABP6P51161 128 aa13.71□□□□□ -0.22
PRPF40A-212ENST00000545856 ERVS71-1P61550 626 aa13.71□□□□□ -0.22
PRPF40A-212ENST00000545856 SNTB1Q13884 538 aaKnown RBP13.71□□□□□ -0.22
PRPF40A-212ENST00000545856 SPATA46Q5T0L3 261 aa13.71□□□□□ -0.22
PRPF40A-212ENST00000545856 OR2T2Q6IF00 324 aa13.71□□□□□ -0.22
PRPF40A-212ENST00000545856 ZDHHC23Q8IYP9 409 aa13.71□□□□□ -0.22
PRPF40A-212ENST00000545856 FBXL14Q8N1E6 418 aa13.71□□□□□ -0.22
PRPF40A-212ENST00000545856 CELF2-AS1Q8N7Q2 184 aa13.71□□□□□ -0.22
PRPF40A-212ENST00000545856 ZNF611Q8N823 705 aa13.71□□□□□ -0.22
PRPF40A-212ENST00000545856 OR1M1Q8NGA1 313 aa13.71□□□□□ -0.22
PRPF40A-212ENST00000545856 OR5A2Q8NGI9 324 aa13.71□□□□□ -0.22
PRPF40A-212ENST00000545856 HIST1H2AAQ96QV6 131 aa13.71□□□□□ -0.22
PRPF40A-212ENST00000545856 CENPOQ9BU64 300 aa13.71□□□□□ -0.22
PRPF40A-212ENST00000545856 MRI1Q9BV20 369 aa13.71□□□□□ -0.22
PRPF40A-212ENST00000545856 PAPOLGQ9BWT3 736 aaKnown RBP13.71□□□□□ -0.22
PRPF40A-212ENST00000545856 TMEM100Q9NV29 134 aa13.71□□□□□ -0.22
PRPF40A-212ENST00000545856 SLC7A11Q9UPY5 501 aa13.71□□□□□ -0.22
PRPF40A-212ENST00000545856 ARFGEF3Q5TH69 2177 aa13.7□□□□□ -0.22
PRPF40A-212ENST00000545856 CENPEQ02224 2701 aa13.7□□□□□ -0.22
PRPF40A-212ENST00000545856 CCDC160A6NGH7 325 aa13.7□□□□□ -0.22
PRPF40A-212ENST00000545856 TMEM210A6NLX4 147 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms