RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 GABRA6Q16445 453 aa4.42□□□□□ -1.7
CLIP1-217ENST00000543205 AANATQ16613 207 aa4.42□□□□□ -1.7
CLIP1-217ENST00000543205 HIST3H3Q16695 136 aa4.42□□□□□ -1.7
CLIP1-217ENST00000543205 MESTQ5EB52 335 aa4.42□□□□□ -1.7
CLIP1-217ENST00000543205 TIMM23BQ5SRD1 257 aa4.42□□□□□ -1.7
CLIP1-217ENST00000543205 LEG1Q6P5S2 330 aa4.42□□□□□ -1.7
CLIP1-217ENST00000543205 SSX8Q7RTT4 187 aa4.42□□□□□ -1.7
CLIP1-217ENST00000543205 C17orf78Q8N4C9 275 aa4.42□□□□□ -1.7
CLIP1-217ENST00000543205 ZNF565Q8N9K5 539 aa4.42□□□□□ -1.7
CLIP1-217ENST00000543205 OR52L2PQ8NGH6 319 aa4.42□□□□□ -1.7
CLIP1-217ENST00000543205 OR8D4Q8NGM9 314 aa4.42□□□□□ -1.7
CLIP1-217ENST00000543205 OR4K13Q8NH42 304 aa4.42□□□□□ -1.7
CLIP1-217ENST00000543205 OR52N5Q8NH56 324 aa4.42□□□□□ -1.7
CLIP1-217ENST00000543205 WIPF2Q8TF74 440 aaPredicted RBP4.42□□□□□ -1.7
CLIP1-217ENST00000543205 EME1Q96AY2 570 aa4.42□□□□□ -1.7
CLIP1-217ENST00000543205 GPHA2Q96T91 129 aa4.42□□□□□ -1.7
CLIP1-217ENST00000543205 CIB1Q99828 191 aa4.42□□□□□ -1.7
CLIP1-217ENST00000543205 RBM4BQ9BQ04 359 aaKnown RBP4.42□□□□□ -1.7
CLIP1-217ENST00000543205 C9orf16Q9BUW7 83 aa4.42□□□□□ -1.7
CLIP1-217ENST00000543205 DPCDQ9BVM2 203 aaPredicted RBP4.42□□□□□ -1.7
CLIP1-217ENST00000543205 RBM4Q9BWF3 364 aaKnown RBP4.42□□□□□ -1.7
CLIP1-217ENST00000543205 OSBPL10Q9BXB5 764 aa4.42□□□□□ -1.7
CLIP1-217ENST00000543205 RERGLQ9H628 205 aa4.42□□□□□ -1.7
CLIP1-217ENST00000543205 TMEM231Q9H6L2 316 aa4.42□□□□□ -1.7
CLIP1-217ENST00000543205 SLC17A5Q9NRA2 495 aa4.42□□□□□ -1.7
CLIP1-217ENST00000543205 ONECUT1Q9UBC0 465 aa4.42□□□□□ -1.7
CLIP1-217ENST00000543205 KLHL21Q9UJP4 597 aa4.42□□□□□ -1.7
CLIP1-217ENST00000543205 FOXA2Q9Y261 457 aaPredicted RBP4.42□□□□□ -1.7
CLIP1-217ENST00000543205 AMDHD2Q9Y303 409 aa4.42□□□□□ -1.7
CLIP1-217ENST00000543205 LRBAP50851 2863 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 A0A1W2PR80 420 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 SLC22A23A1A5C7 686 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 OR5H1A6NKK0 313 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 RIIAD1A6NNX1 92 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 BHLHE40O14503 412 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 KCNAB3O43448 404 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 SLC16A7O60669 478 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 KHDRBS3O75525 346 aaKnown RBP4.41□□□□□ -1.7
CLIP1-217ENST00000543205 FARS2O95363 451 aaKnown RBP4.41□□□□□ -1.7
CLIP1-217ENST00000543205 SLC2A10O95528 541 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 IFNGP01579 166 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 GLAP06280 429 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 CRYGCP07315 174 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 ANPEPP15144 967 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 B4GALT1P15291 398 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 NPR2P20594 1047 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 CRABP1P29762 137 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 CDKN2AP42771 156 aaKnown RBP4.41□□□□□ -1.7
CLIP1-217ENST00000543205 CRISP1P54107 249 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 ESRRGP62508 458 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 HSF2Q03933 536 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 FMODQ06828 376 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 GINS1Q14691 196 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 TAB1Q15750 504 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 SGCAQ16586 387 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 PGGHGQ32M88 737 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 C10orf128Q5T292 105 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 KDM4DQ6B0I6 523 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 SLC27A4Q6P1M0 643 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 DNM1P34Q6PK57 102 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 SLC25A47Q6Q0C1 308 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 CCDC36Q8IYA8 594 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 PARP8Q8N3A8 854 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 LNX2Q8N448 690 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 IQCF1Q8N6M8 205 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 ACBD4Q8NC06 268 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 OR52E2Q8NGJ4 325 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 PLEKHA8Q96JA3 519 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 NMNAT3Q96T66 252 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 DDOQ99489 341 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 OR10A2Q9H208 303 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 SYT4Q9H2B2 425 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 KCNN2Q9H2S1 579 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 ZCCHC4Q9H5U6 513 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 SEC61A2Q9H9S3 476 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 FN3KRPQ9HA64 309 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 TMEM38BQ9NVV0 291 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 MGAT4CQ9UBM8 478 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 F8P00451 2351 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 IGKV1D-43A0A0B4J1Z2 117 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 EI24O14681 340 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 PRAF2O60831 178 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 HMGN1P05114 100 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 CD79AP11912 226 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 CDK5Q00535 292 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 TRIP10Q15642 601 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 ANKRD55Q3KP44 614 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 ZNF600Q6ZNG1 722 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 ZNF627Q7L945 461 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 SLC22A24Q8N4F4 322 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 CBR4Q8N4T8 237 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 WDR31Q8NA23 367 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 SLC37A3Q8NCC5 494 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 SDR9C7Q8NEX9 313 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 OR14K1Q8NGZ2 314 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 OR4Q3Q8NH05 313 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 FCGR1BQ92637 280 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 DPF1Q92782 380 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 OTULINQ96BN8 352 aa4.41□□□□□ -1.7
CLIP1-217ENST00000543205 MSI2Q96DH6 328 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms