RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 IGHV1-18A0A0C4DH31 117 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 A0A1W2PRQ8 180 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 FUOMA2VDF0 154 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 TRIM64CA6NLI5 447 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 OVOL3O00110 214 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 XKRYO14609 159 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 MTRF1O75570 445 aaKnown RBP4.6□□□□□ -1.67
CPSF7-220ENST00000541963 IGKV3-15P01624 115 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 IGLV1-44P01699 117 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 FABP3P05413 133 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 ERCC1P07992 297 aaPredicted RBP4.6□□□□□ -1.67
CPSF7-220ENST00000541963 SOD3P08294 240 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 CCDC159P0C7I6 412 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 PGA4P0DJD7 388 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 PGA3P0DJD8 388 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 SMIM18P0DKX4 95 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 HOXB6P17509 224 aaKnown RBP4.6□□□□□ -1.67
CPSF7-220ENST00000541963 M6PRP20645 277 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 LMO1P25800 156 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 RPL4P36578 427 aaKnown RBP4.6□□□□□ -1.67
CPSF7-220ENST00000541963 IDH3GP51553 393 aaPredicted RBP4.6□□□□□ -1.67
CPSF7-220ENST00000541963 DSCR9P59020 149 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 RPL27P61353 136 aaKnown RBP4.6□□□□□ -1.67
CPSF7-220ENST00000541963 SNRPD2P62316 118 aaKnown RBP4.6□□□□□ -1.67
CPSF7-220ENST00000541963 GALK2Q01415 458 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 NAAAQ02083 359 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 NPRL3Q12980 569 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 DGCR6Q14129 220 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 MELKQ14680 651 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 SNAPC1Q16533 368 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 CLEC12BQ2HXU8 276 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 PGGHGQ32M88 737 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 ZBED5Q49AG3 693 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 PAPPA-AS1Q5QFB9 102 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 PHYHD1Q5SRE7 291 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 THEM4Q5T1C6 240 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 C16orf87Q6PH81 154 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 UNQ6126/PRO20091Q6UXV3 157 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 TMPRSS11FQ6ZWK6 438 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 SLC16A14Q7RTX9 510 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 BIVMQ86UB2 503 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 NRMQ8IXM6 262 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 SLC22A24Q8N4F4 322 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 LINC00471Q8N535 108 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 GCSAMQ8N6F7 178 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 RNF148Q8N7C7 305 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 WFDC11Q8NEX6 87 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 NUP37Q8NFH4 326 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 OR51A7Q8NH64 312 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 TMED6Q8WW62 240 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 NEUROG1Q92886 237 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 MCHR2Q969V1 340 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 C18orf12Q96KH6 178 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 DOK1Q99704 481 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 RHNO1Q9BSD3 238 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 THTPAQ9BU02 230 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 ALG12Q9BV10 488 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 KRTAP4-7Q9BYR0 210 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 TXNIPQ9H3M7 391 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 C1orf198Q9H425 327 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 TMEM165Q9HC07 324 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 HMG20AQ9NP66 347 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 RHCGQ9UBD6 479 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 CD300AQ9UGN4 299 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 ZNF346Q9UL40 294 aaKnown RBP4.6□□□□□ -1.67
CPSF7-220ENST00000541963 APCP25054 2843 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 NAV2Q8IVL1 2488 aa4.6□□□□□ -1.67
CPSF7-220ENST00000541963 A0A087WUU8 490 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 IQCMA0A1B0GVH7 501 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 ISPDA4D126 451 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 TRIM64BA6NI03 449 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 FAM90A26D6RGX4 464 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 ATP6V1G2-DDX39BF2Z307 99 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 hCG_2039718K7EN88 272 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 FFAR1O14842 300 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 PLPP2O43688 288 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 NDUFB2O95178 105 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 GADD45GO95257 159 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 CD8AP01732 235 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 IGHMP01871 453 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 HLA-HP01893 362 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 SERPINA5P05154 406 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 CD14P08571 375 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 CSF3P09919 207 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 TSPAN19P0C672 248 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 CECR9P0C854 216 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 B4GALT1P15291 398 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 RRM2P31350 389 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 FBN2P35556 2912 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 ACVR1BP36896 505 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 CDKN1AP38936 164 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 CDKN2AP42771 156 aaKnown RBP4.59□□□□□ -1.67
CPSF7-220ENST00000541963 SERPINB10P48595 397 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 TMBIM6P55061 237 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 RIPPLY3P57055 190 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 PCBD1P61457 104 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 RPS23P62266 143 aaKnown RBP4.59□□□□□ -1.67
CPSF7-220ENST00000541963 SNRPEP62304 92 aaKnown RBP4.59□□□□□ -1.67
CPSF7-220ENST00000541963 SPIBQ01892 262 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 NOTCH2Q04721 2471 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms