RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 SMUG1Q53HV7 270 aa2.18□□□□□ -2.06
RAP1B-224ENST00000541216 THEM4Q5T1C6 240 aa2.18□□□□□ -2.06
RAP1B-224ENST00000541216 METTL21CQ5VZV1 264 aa2.18□□□□□ -2.06
RAP1B-224ENST00000541216 SAXO2Q658L1 398 aa2.18□□□□□ -2.06
RAP1B-224ENST00000541216 COQ8AQ8NI60 647 aa2.18□□□□□ -2.06
RAP1B-224ENST00000541216 CIRBP-AS1Q8TBR5 109 aa2.18□□□□□ -2.06
RAP1B-224ENST00000541216 ZNF502Q8TBZ5 544 aa2.18□□□□□ -2.06
RAP1B-224ENST00000541216 FBXO32Q969P5 355 aa2.18□□□□□ -2.06
RAP1B-224ENST00000541216 L3HYPDHQ96EM0 354 aa2.18□□□□□ -2.06
RAP1B-224ENST00000541216 OR51M1Q9H341 326 aa2.18□□□□□ -2.06
RAP1B-224ENST00000541216 TMEM9BQ9NQ34 198 aa2.18□□□□□ -2.06
RAP1B-224ENST00000541216 DDX19AQ9NUU7 478 aaKnown RBP2.18□□□□□ -2.06
RAP1B-224ENST00000541216 COX16Q9P0S2 106 aa2.18□□□□□ -2.06
RAP1B-224ENST00000541216 PSMC3IPQ9P2W1 217 aaPredicted RBP2.18□□□□□ -2.06
RAP1B-224ENST00000541216 CTSFQ9UBX1 484 aa2.18□□□□□ -2.06
RAP1B-224ENST00000541216 GOLT1BQ9Y3E0 138 aa2.18□□□□□ -2.06
RAP1B-224ENST00000541216 NIPBLQ6KC79 2804 aaeCLIP2.18□□□□□ -2.06
RAP1B-224ENST00000541216 TLN2Q9Y4G6 2542 aa2.18□□□□□ -2.06
RAP1B-224ENST00000541216 ADGRA3Q8IWK6 1321 aa2.17□□□□□ -2.06
RAP1B-224ENST00000541216 COL6A6A6NMZ7 2263 aa2.17□□□□□ -2.06
RAP1B-224ENST00000541216 ZNF236Q9UL36 1845 aa2.17□□□□□ -2.06
RAP1B-224ENST00000541216 K7EM74 188 aa2.17□□□□□ -2.06
RAP1B-224ENST00000541216 SNAI1O95863 264 aaPredicted RBP2.17□□□□□ -2.06
RAP1B-224ENST00000541216 OR56A5P0C7T3 313 aa2.17□□□□□ -2.06
RAP1B-224ENST00000541216 HOXB8P17481 243 aaPredicted RBP2.17□□□□□ -2.06
RAP1B-224ENST00000541216 EIF2S2P20042 333 aaKnown RBP2.17□□□□□ -2.06
RAP1B-224ENST00000541216 CEACAM3P40198 252 aa2.17□□□□□ -2.06
RAP1B-224ENST00000541216 CX3CR1P49238 355 aa2.17□□□□□ -2.06
RAP1B-224ENST00000541216 CDH17Q12864 832 aa2.17□□□□□ -2.06
RAP1B-224ENST00000541216 RNASEKQ6P5S7 137 aaKnown RBP2.17□□□□□ -2.06
RAP1B-224ENST00000541216 TMEM107Q6UX40 140 aa2.17□□□□□ -2.06
RAP1B-224ENST00000541216 SPATA4Q8NEY3 305 aa2.17□□□□□ -2.06
RAP1B-224ENST00000541216 OR6N1Q8NGY5 312 aa2.17□□□□□ -2.06
RAP1B-224ENST00000541216 SLC7A13Q8TCU3 470 aa2.17□□□□□ -2.06
RAP1B-224ENST00000541216 C17orf50Q8WW18 174 aa2.17□□□□□ -2.06
RAP1B-224ENST00000541216 CAMK2N2Q96S95 79 aa2.17□□□□□ -2.06
RAP1B-224ENST00000541216 ILKAPQ9H0C8 392 aaPredicted RBP2.17□□□□□ -2.06
RAP1B-224ENST00000541216 CRYBG3Q68DQ2 2970 aa2.17□□□□□ -2.06
RAP1B-224ENST00000541216 ATMQ13315 3056 aa2.17□□□□□ -2.06
RAP1B-224ENST00000541216 CACNA1EQ15878 2313 aa2.17□□□□□ -2.06
RAP1B-224ENST00000541216 FANCMQ8IYD8 2048 aa2.17□□□□□ -2.06
RAP1B-224ENST00000541216 PTPRSQ13332 1948 aa2.17□□□□□ -2.06
RAP1B-224ENST00000541216 DOCK1Q14185 1865 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 SIPA1L3O60292 1781 aaPredicted RBP2.16□□□□□ -2.06
RAP1B-224ENST00000541216 MEGF8Q7Z7M0 2845 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 PKD1L1Q8TDX9 2849 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 COL6A5A8TX70 2615 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 ZNF850A8MQ14 1090 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 RAB29O14966 203 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 SERPINA5P05154 406 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 C1GALT1C1LP0DN25 315 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 F2RP25116 425 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 CHMLP26374 656 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 SSTR5P35346 364 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 CXCL12P48061 93 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 TMED10P49755 219 aaKnown RBP2.16□□□□□ -2.06
RAP1B-224ENST00000541216 ACTR3P61158 418 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 ADARB1P78563 741 aaKnown RBP2.16□□□□□ -2.06
RAP1B-224ENST00000541216 RCAN2Q14206 197 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 ZNF726P1Q15940 193 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 ORMDL2Q53FV1 153 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 CLEC18BQ6UXF7 455 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 CERS6Q6ZMG9 384 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 SLC16A13Q7RTY0 426 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 CALHM1Q8IU99 346 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 CDKL3Q8IVW4 592 aaPredicted RBP2.16□□□□□ -2.06
RAP1B-224ENST00000541216 PRSS58Q8IYP2 241 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 NECAB1Q8N987 351 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 GATSQ8NAP1 163 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 OR4K5Q8NGD3 323 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 OR10AD1Q8NGE0 317 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 KCNG3Q8TAE7 436 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 PIFOQ8TCI5 191 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 PHF10Q8WUB8 498 aaKnown RBP2.16□□□□□ -2.06
RAP1B-224ENST00000541216 KIFAP3Q92845 792 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 NTAN1Q96AB6 310 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 FLYWCH2Q96CP2 140 aaKnown RBP2.16□□□□□ -2.06
RAP1B-224ENST00000541216 DOK1Q99704 481 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 SLC29A1Q99808 456 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 OR52D1Q9H346 318 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 FAM49BQ9NUQ9 324 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 SLC2A8Q9NY64 477 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 VANGL2Q9ULK5 521 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 SIGLEC9Q9Y336 463 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 IKBKGQ9Y6K9 419 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 PTPRFP10586 1907 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 COL11A1P12107 1806 aaPredicted RBP2.16□□□□□ -2.06
RAP1B-224ENST00000541216 AHCTF1Q8WYP5 2266 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 RYR3Q15413 4870 aa2.16□□□□□ -2.06
RAP1B-224ENST00000541216 URB1O60287 2271 aaKnown RBP2.15□□□□□ -2.06
RAP1B-224ENST00000541216 IGHV1OR15-9A0A0B4J2B8 117 aa2.15□□□□□ -2.07
RAP1B-224ENST00000541216 NUPL2O15504 423 aaKnown RBP2.15□□□□□ -2.07
RAP1B-224ENST00000541216 HLA-DQA1P01909 254 aa2.15□□□□□ -2.07
RAP1B-224ENST00000541216 CD74P04233 296 aa2.15□□□□□ -2.07
RAP1B-224ENST00000541216 RNASE2P10153 161 aaKnown RBP2.15□□□□□ -2.07
RAP1B-224ENST00000541216 DTYMKP23919 212 aa2.15□□□□□ -2.07
RAP1B-224ENST00000541216 FOXN2P32314 431 aa2.15□□□□□ -2.07
RAP1B-224ENST00000541216 OR7A5Q15622 319 aa2.15□□□□□ -2.07
RAP1B-224ENST00000541216 IGFBP7Q16270 282 aa2.15□□□□□ -2.07
RAP1B-224ENST00000541216 AVPI1Q5T686 147 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms