RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 COMMD1Q8N668 190 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 RAB24Q969Q5 203 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 MS4A6EQ96DS6 147 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 GAL3ST4Q96RP7 486 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 UBQLN4Q9NRR5 601 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 A0A0A6YYH2 397 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 A6NJ64 397 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 HSPA12AO43301 675 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 TBX19O60806 448 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 PTBP3O95758 552 aaKnown RBP7.77□□□□□ -1.17
DDB1-217ENST00000540166 SCGB1D1O95968 90 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 CST4P01036 141 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 GFERP55789 205 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 UBE2V2Q15819 145 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 ZNF836Q6ZNA1 936 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.77□□□□□ -1.17
DDB1-217ENST00000540166 DMRTC2Q8IXT2 367 aaPredicted RBP7.77□□□□□ -1.17
DDB1-217ENST00000540166 SLC43A2Q8N370 569 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 ARRDC1Q8N5I2 433 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 OR52E1Q8NGJ3 308 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 OR8U1Q8NH10 309 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 Q96M85 177 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 HAO2Q9NYQ3 351 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 ZDHHC8Q9ULC8 765 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 SRPK3Q9UPE1 567 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 SIGLEC7Q9Y286 467 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 TMEM184BQ9Y519 407 aaPredicted RBP7.77□□□□□ -1.17
DDB1-217ENST00000540166 IGHV5-10-1A0A0J9YXX1 117 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 MEGF11A6BM72 1044 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 LILRA5A6NI73 299 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 CLDN4O14493 209 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 PIN1P1O15428 100 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 LDB3O75112 727 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 ALOX12BO75342 701 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 ZGLP1P0C6A0 271 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 FAM87AP0C7U9 286 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 ZNF888P0CJ79 500 aaPredicted RBP7.77□□□□□ -1.17
DDB1-217ENST00000540166 RPL12P30050 165 aaKnown RBP7.77□□□□□ -1.17
DDB1-217ENST00000540166 FCGR2CP31995 323 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 TLE3Q04726 772 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 METRNLQ641Q3 311 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 FBXO42Q6P3S6 717 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 OPN5Q6U736 354 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 HPSE2Q8WWQ2 592 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 RSC1A1Q92681 617 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 TCTN2Q96GX1 697 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 MFRPQ9BY79 579 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 TUBA4BQ9H853 241 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 PARP11Q9NR21 331 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 CACFD1Q9UGQ2 172 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 IL17BQ9UHF5 180 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 SVILO95425 2214 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 A0A0A6YYD5 115 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 A0A1B0GWJ7 208 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 A0A1W2PQM1 296 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 DUS4LO95620 317 aaKnown RBP7.76□□□□□ -1.17
DDB1-217ENST00000540166 RPS2P15880 293 aaKnown RBP7.76□□□□□ -1.17
DDB1-217ENST00000540166 ST6GAL1P15907 406 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 DUSP5Q16690 384 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 MFSD12Q6NUT3 480 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 PRSS54Q6PEW0 395 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 POMZP3Q6PJE2 187 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 C1orf87Q8N0U7 546 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 ZNF619Q8N2I2 560 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 HSD17B11Q8NBQ5 300 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 CCDC54Q8NEL0 328 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 SEMA6DQ8NFY4 1073 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 FNDC9Q8TBE3 224 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 MARCH1Q8TCQ1 289 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 NOL4LQ96MY1 436 aaPredicted RBP7.76□□□□□ -1.17
DDB1-217ENST00000540166 NKX3-1Q99801 234 aaPredicted RBP7.76□□□□□ -1.17
DDB1-217ENST00000540166 CHST5Q9GZS9 411 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 OCIAD1Q9NX40 245 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 GRHPRQ9UBQ7 328 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 CDH23Q9H251 3354 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 GPANK1O95872 356 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 AK1P00568 194 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 S1PR1P21453 382 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 EFNB2P52799 333 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 SPOCK1Q08629 439 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 IL11RAQ14626 422 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 NNATQ16517 81 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 IAH1Q2TAA2 248 aaPredicted RBP7.76□□□□□ -1.17
DDB1-217ENST00000540166 DCST2Q5T1A1 773 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 UBE3DQ7Z6J8 389 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 LFNGQ8NES3 379 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 OR2A1Q8NGT9 310 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 OR4K15Q8NH41 348 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 VOPP1Q96AW1 172 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 SLC25A44Q96H78 314 aaPredicted RBP7.76□□□□□ -1.17
DDB1-217ENST00000540166 TP53TG5Q9Y2B4 290 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 TMED7Q9Y3B3 224 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 RAB27BO00194 218 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 EFSO43281 561 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 NPY4RP50391 375 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 SCAND1P57086 179 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 PMPCAQ10713 525 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 SLC10A1Q14973 349 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 EXOSC7Q15024 291 aaKnown RBP7.76□□□□□ -1.17
DDB1-217ENST00000540166 MLC1Q15049 377 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms