RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 CRABP1P29762 137 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 PPP1CCP36873 323 aaKnown RBP6.12□□□□□ -1.43
CPSF7-215ENST00000536145 P2RY1P47900 373 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 EMP2P54851 167 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 CLDN6P56747 220 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 LSM6P62312 80 aaKnown RBP6.12□□□□□ -1.43
CPSF7-215ENST00000536145 RAP1AP62834 184 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 SLC35A1P78382 337 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 ZP2Q05996 745 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 ZP4Q12836 540 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 FOXF1Q12946 379 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 EIF3IQ13347 325 aaKnown RBP6.12□□□□□ -1.43
CPSF7-215ENST00000536145 ELOBQ15370 118 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 LBHQ53QV2 105 aaPredicted RBP6.12□□□□□ -1.43
CPSF7-215ENST00000536145 KHDC3LQ587J8 217 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 FAM78AQ5JUQ0 283 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 CHRDL2Q6WN34 429 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 SSX9Q7RTT3 188 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 ZNF761Q86XN6 746 aaPredicted RBP6.12□□□□□ -1.43
CPSF7-215ENST00000536145 C9orf40Q8IXQ3 194 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 FAM71E2Q8N5Q1 922 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 TMEM156Q8N614 296 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 GATSQ8NAP1 163 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 APCDD1LQ8NCL9 501 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 CCDC54Q8NEL0 328 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 LFNGQ8NES3 379 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 OR10D4PQ8NGN7 298 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 OR5H2Q8NGV7 314 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 OR5R1Q8NH85 324 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 Q8WTZ3 238 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 RNF133Q8WVZ7 376 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 MRPL24Q96A35 216 aaKnown RBP6.12□□□□□ -1.43
CPSF7-215ENST00000536145 RHOVQ96L33 236 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 FOXN4Q96NZ1 517 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 DEFB118Q96PH6 123 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 C20orf24Q9BUV8 137 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 RTN4RQ9BZR6 473 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 FOXQ1Q9C009 403 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 OR10A5Q9H207 317 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 HIPK2Q9H2X6 1198 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 PTGES2Q9H7Z7 377 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 METTL8Q9H825 291 aaKnown RBP6.12□□□□□ -1.43
CPSF7-215ENST00000536145 CAPN10Q9HC96 672 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 GFOD1Q9NXC2 390 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 TP53TG5Q9Y2B4 290 aa6.12□□□□□ -1.43
CPSF7-215ENST00000536145 COA3Q9Y2R0 106 aaPredicted RBP6.12□□□□□ -1.43
CPSF7-215ENST00000536145 TRPM6Q9BX84 2022 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 CCDC187A0A096LP49 1063 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 A0A0J9YY10 115 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 TMEM269A0A1B0GVZ9 245 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 A0A1W2PQU0 124 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 BLACEA4D250 179 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 FAM221BA6H8Z2 402 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 CRYM-AS1A6NIL9 109 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 HIDE1A8MVS5 230 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 H7C1Q1 480 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 PLPP3O14495 311 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 MSTNO14793 375 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 HIST1H2BKO60814 126 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 RAMP1O60894 148 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 UTS2O95399 124 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 APBB3O95704 486 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 PTBP3O95758 552 aaKnown RBP6.11□□□□□ -1.43
CPSF7-215ENST00000536145 HIST1H2BJP06899 126 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 CTSBP07858 339 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 CD63P08962 238 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 HNRNPA1P09651 372 aaKnown RBP eCLIP6.11□□□□□ -1.43
CPSF7-215ENST00000536145 PI3P19957 117 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 BCKDHBP21953 392 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 HIST1H2BOP23527 126 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 S100A2P29034 98 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 DDTP30046 118 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 HIST1H2BBP33778 126 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 SLC6A8P48029 635 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 PPM1FP49593 454 aaPredicted RBP6.11□□□□□ -1.43
CPSF7-215ENST00000536145 RND2P52198 227 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 HIST1H2BDP58876 126 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 S100A10P60903 97 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 RAB4BP61018 213 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 HIST1H2BCP62807 126 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 RPS21P63220 83 aaKnown RBP6.11□□□□□ -1.43
CPSF7-215ENST00000536145 SGCGQ13326 291 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 GAMTQ14353 236 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 HIST2H2BEQ16778 126 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 IAH1Q2TAA2 248 aaPredicted RBP6.11□□□□□ -1.43
CPSF7-215ENST00000536145 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.11□□□□□ -1.43
CPSF7-215ENST00000536145 GPR157Q5UAW9 335 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 GGNBP1Q5YKI7 109 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 ABLIM2Q6H8Q1 611 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 BEND4Q6ZU67 534 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 DCXRQ7Z4W1 244 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 GRASPQ7Z6J2 395 aaPredicted RBP6.11□□□□□ -1.43
CPSF7-215ENST00000536145 STX12Q86Y82 276 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 WDFY1Q8IWB7 410 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 ZNF101Q8IZC7 436 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 LRTM2Q8N967 370 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 TMEM104Q8NE00 496 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 OR10AD1Q8NGE0 317 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 OR5L2Q8NGL0 311 aa6.11□□□□□ -1.43
CPSF7-215ENST00000536145 OR10S1Q8NGN2 331 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms