RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 CLPTM1O96005 669 aa10.69□□□□□ -0.7
COPB1-208ENST00000532088 SERPINA3P01011 423 aa10.69□□□□□ -0.7
COPB1-208ENST00000532088 CST4P01036 141 aa10.69□□□□□ -0.7
COPB1-208ENST00000532088 ADH4P08319 380 aa10.69□□□□□ -0.7
COPB1-208ENST00000532088 DANCRP0C864 163 aa10.69□□□□□ -0.7
COPB1-208ENST00000532088 HSMCR30P0CW71 290 aa10.69□□□□□ -0.7
COPB1-208ENST00000532088 PSMB9P28065 219 aa10.69□□□□□ -0.7
COPB1-208ENST00000532088 GABRA5P31644 462 aa10.69□□□□□ -0.7
COPB1-208ENST00000532088 SLC3A1Q07837 685 aa10.69□□□□□ -0.7
COPB1-208ENST00000532088 RIPPLY1Q0D2K3 151 aa10.69□□□□□ -0.7
COPB1-208ENST00000532088 HLXQ14774 488 aaPredicted RBP10.69□□□□□ -0.7
COPB1-208ENST00000532088 VHLLQ6RSH7 139 aa10.69□□□□□ -0.7
COPB1-208ENST00000532088 COMMD2Q86X83 199 aa10.69□□□□□ -0.7
COPB1-208ENST00000532088 OR8G5Q8NG78 346 aa10.69□□□□□ -0.7
COPB1-208ENST00000532088 PHYHIPQ92561 330 aa10.69□□□□□ -0.7
COPB1-208ENST00000532088 PIGTQ969N2 578 aa10.69□□□□□ -0.7
COPB1-208ENST00000532088 PDCD1LG2Q9BQ51 273 aa10.69□□□□□ -0.7
COPB1-208ENST00000532088 NDUFB11Q9NX14 153 aa10.69□□□□□ -0.7
COPB1-208ENST00000532088 DUSP13Q9UII6 198 aa10.69□□□□□ -0.7
COPB1-208ENST00000532088 FASNP49327 2511 aaKnown RBP10.68□□□□□ -0.7
COPB1-208ENST00000532088 SPTAN1Q13813 2472 aaKnown RBP10.68□□□□□ -0.7
COPB1-208ENST00000532088 PKDREJQ9NTG1 2253 aa10.68□□□□□ -0.7
COPB1-208ENST00000532088 ZNF816-ZNF321PA0A0X1KG74 233 aa10.68□□□□□ -0.7
COPB1-208ENST00000532088 TIMM8AO60220 97 aaPredicted RBP10.68□□□□□ -0.7
COPB1-208ENST00000532088 SC5DO75845 299 aa10.68□□□□□ -0.7
COPB1-208ENST00000532088 INMTO95050 263 aa10.68□□□□□ -0.7
COPB1-208ENST00000532088 RAF1P04049 648 aa10.68□□□□□ -0.7
COPB1-208ENST00000532088 CD2P06729 351 aa10.68□□□□□ -0.7
COPB1-208ENST00000532088 MAPK3P27361 379 aaPredicted RBP10.68□□□□□ -0.7
COPB1-208ENST00000532088 PPOXP50336 477 aa10.68□□□□□ -0.7
COPB1-208ENST00000532088 MMP15P51511 669 aa10.68□□□□□ -0.7
COPB1-208ENST00000532088 GP2P55259 537 aaKnown RBP10.68□□□□□ -0.7
COPB1-208ENST00000532088 RPS11P62280 158 aaKnown RBP eCLIP10.68□□□□□ -0.7
COPB1-208ENST00000532088 SNRPD2P62316 118 aaKnown RBP10.68□□□□□ -0.7
COPB1-208ENST00000532088 TNK1Q13470 666 aa10.68□□□□□ -0.7
COPB1-208ENST00000532088 NEDD8Q15843 81 aa10.68□□□□□ -0.7
COPB1-208ENST00000532088 TSTQ16762 297 aaKnown RBP10.68□□□□□ -0.7
COPB1-208ENST00000532088 MST1LQ2TV78 715 aa10.68□□□□□ -0.7
COPB1-208ENST00000532088 GFOD2Q3B7J2 385 aa10.68□□□□□ -0.7
COPB1-208ENST00000532088 Q499Y3 187 aa10.68□□□□□ -0.7
COPB1-208ENST00000532088 LIPKQ5VXJ0 399 aa10.68□□□□□ -0.7
COPB1-208ENST00000532088 TMEM42Q69YG0 159 aa10.68□□□□□ -0.7
COPB1-208ENST00000532088 OR2T2Q6IF00 324 aa10.68□□□□□ -0.7
COPB1-208ENST00000532088 C11orf71Q6IPW1 123 aa10.68□□□□□ -0.7
COPB1-208ENST00000532088 TMEM200AQ86VY9 491 aa10.68□□□□□ -0.7
COPB1-208ENST00000532088 ZFP41Q8N8Y5 198 aa10.68□□□□□ -0.7
COPB1-208ENST00000532088 OR56B2PQ8NGI1 322 aa10.68□□□□□ -0.7
COPB1-208ENST00000532088 IGFBPL1Q8WX77 278 aa10.68□□□□□ -0.7
COPB1-208ENST00000532088 PP6455Q8WZ26 134 aa10.68□□□□□ -0.7
COPB1-208ENST00000532088 TECTBQ96PL2 329 aa10.68□□□□□ -0.7
COPB1-208ENST00000532088 DIRC2Q96SL1 478 aa10.68□□□□□ -0.7
COPB1-208ENST00000532088 SLC30A2Q9BRI3 323 aa10.68□□□□□ -0.7
COPB1-208ENST00000532088 TRAF4Q9BUZ4 470 aaPredicted RBP10.68□□□□□ -0.7
COPB1-208ENST00000532088 ZNF275Q9NSD4 429 aaPredicted RBP10.68□□□□□ -0.7
COPB1-208ENST00000532088 TAAR3PQ9P1P4 343 aa10.68□□□□□ -0.7
COPB1-208ENST00000532088 SCOCQ9UIL1 159 aa10.68□□□□□ -0.7
COPB1-208ENST00000532088 ENPP5Q9UJA9 477 aa10.68□□□□□ -0.7
COPB1-208ENST00000532088 EDARQ9UNE0 448 aa10.68□□□□□ -0.7
COPB1-208ENST00000532088 SF3B6Q9Y3B4 125 aaKnown RBP10.68□□□□□ -0.7
COPB1-208ENST00000532088 MPC1Q9Y5U8 109 aa10.68□□□□□ -0.7
COPB1-208ENST00000532088 A0A1W2PPW3 197 aa10.67□□□□□ -0.7
COPB1-208ENST00000532088 PLSCR5A0PG75 271 aa10.67□□□□□ -0.7
COPB1-208ENST00000532088 ANKRD30BLA7E2S9 258 aa10.67□□□□□ -0.7
COPB1-208ENST00000532088 M0R233 179 aa10.67□□□□□ -0.7
COPB1-208ENST00000532088 GATBO75879 557 aaKnown RBP10.67□□□□□ -0.7
COPB1-208ENST00000532088 HLA-DPB1P04440 258 aa10.67□□□□□ -0.7
COPB1-208ENST00000532088 TFAP2AP05549 437 aa10.67□□□□□ -0.7
COPB1-208ENST00000532088 ACKR3P25106 362 aa10.67□□□□□ -0.7
COPB1-208ENST00000532088 ALDH3B2P48448 385 aa10.67□□□□□ -0.7
COPB1-208ENST00000532088 SSX1Q16384 188 aa10.67□□□□□ -0.7
COPB1-208ENST00000532088 TMEM255AQ5JRV8 349 aa10.67□□□□□ -0.7
COPB1-208ENST00000532088 FAM209AQ5JX71 171 aa10.67□□□□□ -0.7
COPB1-208ENST00000532088 CD200R1LQ6Q8B3 271 aa10.67□□□□□ -0.7
COPB1-208ENST00000532088 PAMR1Q6UXH9 720 aa10.67□□□□□ -0.7
COPB1-208ENST00000532088 UNQ9370/PRO34162Q6UXP9 181 aa10.67□□□□□ -0.7
COPB1-208ENST00000532088 UTS2BQ765I0 119 aa10.67□□□□□ -0.7
COPB1-208ENST00000532088 LRP11Q86VZ4 500 aa10.67□□□□□ -0.7
COPB1-208ENST00000532088 RDH10Q8IZV5 341 aa10.67□□□□□ -0.7
COPB1-208ENST00000532088 PARP16Q8N5Y8 322 aa10.67□□□□□ -0.7
COPB1-208ENST00000532088 SPERTQ8NA61 448 aa10.67□□□□□ -0.7
COPB1-208ENST00000532088 OR13G1Q8NGZ3 307 aa10.67□□□□□ -0.7
COPB1-208ENST00000532088 RGP1Q92546 391 aaPredicted RBP10.67□□□□□ -0.7
COPB1-208ENST00000532088 FAM71F1Q96KD3 344 aaPredicted RBP10.67□□□□□ -0.7
COPB1-208ENST00000532088 SYT3Q9BQG1 590 aa10.67□□□□□ -0.7
COPB1-208ENST00000532088 SOX7Q9BT81 388 aa10.67□□□□□ -0.7
COPB1-208ENST00000532088 MS4A5Q9H3V2 200 aa10.67□□□□□ -0.7
COPB1-208ENST00000532088 GSX1Q9H4S2 264 aaPredicted RBP10.67□□□□□ -0.7
COPB1-208ENST00000532088 UBTD1Q9HAC8 227 aa10.67□□□□□ -0.7
COPB1-208ENST00000532088 PLEKHA1Q9HB21 404 aa10.67□□□□□ -0.7
COPB1-208ENST00000532088 TMEM100Q9NV29 134 aa10.67□□□□□ -0.7
COPB1-208ENST00000532088 NKIRAS2Q9NYR9 191 aa10.67□□□□□ -0.7
COPB1-208ENST00000532088 ZDHHC8Q9ULC8 765 aa10.67□□□□□ -0.7
COPB1-208ENST00000532088 DHDHQ9UQ10 334 aa10.67□□□□□ -0.7
COPB1-208ENST00000532088 PLCE1Q9P212 2302 aa10.66□□□□□ -0.7
COPB1-208ENST00000532088 GMDSO60547 372 aa10.66□□□□□ -0.7
COPB1-208ENST00000532088 CD8AP01732 235 aa10.66□□□□□ -0.7
COPB1-208ENST00000532088 CD55P08174 381 aa10.66□□□□□ -0.7
COPB1-208ENST00000532088 OCM2P0CE71 109 aa10.66□□□□□ -0.7
COPB1-208ENST00000532088 RPL5P46777 297 aaKnown RBP10.66□□□□□ -0.7
COPB1-208ENST00000532088 MZT1Q08AG7 82 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms