RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 DHRSXQ8N5I4 330 aa10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 OR8S1Q8NH09 359 aa10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 OR51E1Q8TCB6 317 aa10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 APH1BQ8WW43 257 aa10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 RAB39BQ96DA2 213 aa10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 LGALS12Q96DT0 336 aa10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 GAL3ST1Q99999 423 aa10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 PPP1R3EQ9H7J1 279 aa10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 MOB1AQ9H8S9 216 aa10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 GPR84Q9NQS5 396 aa10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 UFSP2Q9NUQ7 469 aa10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 C14orf119Q9NWQ9 140 aa10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 MPC1Q9Y5U8 109 aa10.66□□□□□ -0.7
CCDC90B-216ENST00000529856 DAPL1A0PJW8 107 aa10.65□□□□□ -0.7
CCDC90B-216ENST00000529856 FAM20BO75063 409 aa10.65□□□□□ -0.7
CCDC90B-216ENST00000529856 CRLF1O75462 422 aa10.65□□□□□ -0.7
CCDC90B-216ENST00000529856 WBP4O75554 376 aaKnown RBP10.65□□□□□ -0.7
CCDC90B-216ENST00000529856 FSTL3O95633 263 aa10.65□□□□□ -0.7
CCDC90B-216ENST00000529856 GRPP07492 148 aa10.65□□□□□ -0.7
CCDC90B-216ENST00000529856 DBTP11182 482 aaKnown RBP10.65□□□□□ -0.7
CCDC90B-216ENST00000529856 IRF2P14316 349 aa10.65□□□□□ -0.7
CCDC90B-216ENST00000529856 GNALP38405 381 aa10.65□□□□□ -0.7
CCDC90B-216ENST00000529856 MDH2P40926 338 aaKnown RBP10.65□□□□□ -0.7
CCDC90B-216ENST00000529856 ISL1P61371 349 aa10.65□□□□□ -0.7
CCDC90B-216ENST00000529856 ADARB1P78563 741 aaKnown RBP10.65□□□□□ -0.7
CCDC90B-216ENST00000529856 RIPPLY1Q0D2K3 151 aa10.65□□□□□ -0.7
CCDC90B-216ENST00000529856 PRDX4Q13162 271 aa10.65□□□□□ -0.7
CCDC90B-216ENST00000529856 BCL2L15Q5TBC7 163 aa10.65□□□□□ -0.7
CCDC90B-216ENST00000529856 ZNF691Q5VV52 312 aa10.65□□□□□ -0.7
CCDC90B-216ENST00000529856 KCTD20Q7Z5Y7 419 aa10.65□□□□□ -0.7
CCDC90B-216ENST00000529856 CATSPERDQ86XM0 798 aa10.65□□□□□ -0.7
CCDC90B-216ENST00000529856 ACBD7Q8N6N7 88 aa10.65□□□□□ -0.7
CCDC90B-216ENST00000529856 OR11L1Q8NGX0 322 aa10.65□□□□□ -0.7
CCDC90B-216ENST00000529856 RORBQ92753 470 aa10.65□□□□□ -0.7
CCDC90B-216ENST00000529856 PAPOLGQ9BWT3 736 aaKnown RBP10.65□□□□□ -0.7
CCDC90B-216ENST00000529856 FN3KRPQ9HA64 309 aa10.65□□□□□ -0.7
CCDC90B-216ENST00000529856 TMEM165Q9HC07 324 aa10.65□□□□□ -0.7
CCDC90B-216ENST00000529856 AMBNQ9NP70 447 aa10.65□□□□□ -0.7
CCDC90B-216ENST00000529856 ABCB9Q9NP78 766 aa10.65□□□□□ -0.7
CCDC90B-216ENST00000529856 MRPS18AQ9NVS2 196 aaKnown RBP10.65□□□□□ -0.7
CCDC90B-216ENST00000529856 NKX1-2Q9UD57 310 aaPredicted RBP10.65□□□□□ -0.7
CCDC90B-216ENST00000529856 KCNS2Q9ULS6 477 aa10.65□□□□□ -0.7
CCDC90B-216ENST00000529856 GTF2A1LQ9UNN4 478 aa10.65□□□□□ -0.7
CCDC90B-216ENST00000529856 SLC22A13Q9Y226 551 aa10.65□□□□□ -0.7
CCDC90B-216ENST00000529856 RPL36Q9Y3U8 105 aaKnown RBP10.65□□□□□ -0.7
CCDC90B-216ENST00000529856 C2CD3Q4AC94 2353 aa10.65□□□□□ -0.71
CCDC90B-216ENST00000529856 SONP18583 2426 aaKnown RBP10.64□□□□□ -0.71
CCDC90B-216ENST00000529856 A0A1B0GTI1 187 aa10.64□□□□□ -0.71
CCDC90B-216ENST00000529856 ZNF850A8MQ14 1090 aa10.64□□□□□ -0.71
CCDC90B-216ENST00000529856 CLIC3O95833 236 aa10.64□□□□□ -0.71
CCDC90B-216ENST00000529856 MSMBP08118 114 aa10.64□□□□□ -0.71
CCDC90B-216ENST00000529856 DVL1P1P54792 670 aaPredicted RBP10.64□□□□□ -0.71
CCDC90B-216ENST00000529856 IL5RAQ01344 420 aa10.64□□□□□ -0.71
CCDC90B-216ENST00000529856 SLC34A1Q06495 639 aa10.64□□□□□ -0.71
CCDC90B-216ENST00000529856 RAB40BQ12829 278 aa10.64□□□□□ -0.71
CCDC90B-216ENST00000529856 CDONQ4KMG0 1287 aa10.64□□□□□ -0.71
CCDC90B-216ENST00000529856 TP53I3Q53FA7 332 aa10.64□□□□□ -0.71
CCDC90B-216ENST00000529856 Q6ZSR3 168 aa10.64□□□□□ -0.71
CCDC90B-216ENST00000529856 COMMD2Q86X83 199 aa10.64□□□□□ -0.71
CCDC90B-216ENST00000529856 C11orf53Q8IXP5 236 aa10.64□□□□□ -0.71
CCDC90B-216ENST00000529856 MUC20Q8N307 709 aaPredicted RBP10.64□□□□□ -0.71
CCDC90B-216ENST00000529856 KLHL36Q8N4N3 616 aa10.64□□□□□ -0.71
CCDC90B-216ENST00000529856 SPICQ8N5J4 248 aa10.64□□□□□ -0.71
CCDC90B-216ENST00000529856 SEMA6DQ8NFY4 1073 aa10.64□□□□□ -0.71
CCDC90B-216ENST00000529856 OR51F2Q8NH61 342 aa10.64□□□□□ -0.71
CCDC90B-216ENST00000529856 CYGBQ8WWM9 190 aa10.64□□□□□ -0.71
CCDC90B-216ENST00000529856 OR5P3Q8WZ94 311 aa10.64□□□□□ -0.71
CCDC90B-216ENST00000529856 PIGCQ92535 297 aa10.64□□□□□ -0.71
CCDC90B-216ENST00000529856 ITPKCQ96DU7 683 aa10.64□□□□□ -0.71
CCDC90B-216ENST00000529856 POM121Q96HA1 1249 aa10.64□□□□□ -0.71
CCDC90B-216ENST00000529856 FAM71F1Q96KD3 344 aaPredicted RBP10.64□□□□□ -0.71
CCDC90B-216ENST00000529856 MICU1Q9BPX6 476 aa10.64□□□□□ -0.71
CCDC90B-216ENST00000529856 PATZ1Q9HBE1 687 aaKnown RBP10.64□□□□□ -0.71
CCDC90B-216ENST00000529856 C1orf123Q9NWV4 160 aa10.64□□□□□ -0.71
CCDC90B-216ENST00000529856 UBAP1Q9NZ09 502 aa10.64□□□□□ -0.71
CCDC90B-216ENST00000529856 RNF7Q9UBF6 113 aa10.64□□□□□ -0.71
CCDC90B-216ENST00000529856 GNG8Q9UK08 70 aa10.64□□□□□ -0.71
CCDC90B-216ENST00000529856 PCDHB10Q9UN67 800 aa10.64□□□□□ -0.71
CCDC90B-216ENST00000529856 PPIAL4EA0A075B759 164 aa10.63□□□□□ -0.71
CCDC90B-216ENST00000529856 ZNF816-ZNF321PA0A0X1KG74 233 aa10.63□□□□□ -0.71
CCDC90B-216ENST00000529856 A6NLC8 198 aa10.63□□□□□ -0.71
CCDC90B-216ENST00000529856 ANXA2P2A6NMY6 339 aa10.63□□□□□ -0.71
CCDC90B-216ENST00000529856 PPIAL4DF5H284 164 aa10.63□□□□□ -0.71
CCDC90B-216ENST00000529856 H0YAE9 185 aa10.63□□□□□ -0.71
CCDC90B-216ENST00000529856 P2RY10O00398 339 aa10.63□□□□□ -0.71
CCDC90B-216ENST00000529856 PLPP2O43688 288 aa10.63□□□□□ -0.71
CCDC90B-216ENST00000529856 MTRF1O75570 445 aaKnown RBP10.63□□□□□ -0.71
CCDC90B-216ENST00000529856 DHRS3O75911 302 aa10.63□□□□□ -0.71
CCDC90B-216ENST00000529856 ZNF205O95201 554 aa10.63□□□□□ -0.71
CCDC90B-216ENST00000529856 FADS2O95864 444 aaKnown RBP10.63□□□□□ -0.71
CCDC90B-216ENST00000529856 IGHA1P01876 353 aa10.63□□□□□ -0.71
CCDC90B-216ENST00000529856 PPIAL4FP0DN26 164 aa10.63□□□□□ -0.71
CCDC90B-216ENST00000529856 CAPGP40121 348 aa10.63□□□□□ -0.71
CCDC90B-216ENST00000529856 OR12D2P58182 307 aa10.63□□□□□ -0.71
CCDC90B-216ENST00000529856 IL18R1Q13478 541 aa10.63□□□□□ -0.71
CCDC90B-216ENST00000529856 SMN1Q16637 294 aaKnown RBP10.63□□□□□ -0.71
CCDC90B-216ENST00000529856 KLHL22Q53GT1 634 aa10.63□□□□□ -0.71
CCDC90B-216ENST00000529856 FAM76BQ5HYJ3 339 aa10.63□□□□□ -0.71
CCDC90B-216ENST00000529856 FAM201AQ5SY85 155 aa10.63□□□□□ -0.71
CCDC90B-216ENST00000529856 ZBTB37Q5TC79 503 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms