RNA–Protein interactions for RNA: ENST00000529308.5

USP35-203, Transcript of ubiquitin specific peptidase 35, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP35, Length 4,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-203ENST00000529308 IL11RAQ14626 422 aa13.71□□□□□ -0.21
USP35-203ENST00000529308 OR1C1Q15619 314 aa13.71□□□□□ -0.21
USP35-203ENST00000529308 TMEM200AQ86VY9 491 aa13.71□□□□□ -0.21
USP35-203ENST00000529308 MUC20Q8N307 709 aaPredicted RBP13.71□□□□□ -0.21
USP35-203ENST00000529308 CPNE4Q96A23 557 aaPredicted RBP13.71□□□□□ -0.21
USP35-203ENST00000529308 ST6GAL2Q96JF0 529 aa13.71□□□□□ -0.21
USP35-203ENST00000529308 MARVELD1Q9BSK0 173 aa13.71□□□□□ -0.21
USP35-203ENST00000529308 C20orf24Q9BUV8 137 aa13.71□□□□□ -0.21
USP35-203ENST00000529308 MOB1AQ9H8S9 216 aa13.71□□□□□ -0.21
USP35-203ENST00000529308 KLHDC2Q9Y2U9 406 aa13.71□□□□□ -0.21
USP35-203ENST00000529308 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.71□□□□□ -0.212e-6■■■□□ 15.6
USP35-203ENST00000529308 OR4C45A6NMZ5 311 aa13.71□□□□□ -0.21
USP35-203ENST00000529308 TBX6O95947 436 aaPredicted RBP13.71□□□□□ -0.21
USP35-203ENST00000529308 NGFRP08138 427 aa13.71□□□□□ -0.21
USP35-203ENST00000529308 C3AR1Q16581 482 aa13.71□□□□□ -0.21
USP35-203ENST00000529308 RNLSQ5VYX0 342 aa13.71□□□□□ -0.21
USP35-203ENST00000529308 OR8G2PQ6IF36 304 aa13.71□□□□□ -0.21
USP35-203ENST00000529308 C6orf201Q7Z4U5 140 aa13.71□□□□□ -0.21
USP35-203ENST00000529308 INTS12Q96CB8 462 aaKnown RBP13.71□□□□□ -0.21
USP35-203ENST00000529308 MTFP1Q9UDX5 166 aa13.71□□□□□ -0.21
USP35-203ENST00000529308 ZNF354AO60765 605 aaPredicted RBP13.71□□□□□ -0.22
USP35-203ENST00000529308 PDGFBP01127 241 aaPredicted RBP13.71□□□□□ -0.22
USP35-203ENST00000529308 RAB5BP61020 215 aa13.71□□□□□ -0.22
USP35-203ENST00000529308 KCNRGQ8N5I3 272 aa13.71□□□□□ -0.22
USP35-203ENST00000529308 OR56B2PQ8NGI1 322 aa13.71□□□□□ -0.22
USP35-203ENST00000529308 OR10D3Q8NH80 312 aa13.71□□□□□ -0.22
USP35-203ENST00000529308 ESRP2Q9H6T0 727 aaKnown RBP13.71□□□□□ -0.22
USP35-203ENST00000529308 RNF150Q9ULK6 438 aa13.71□□□□□ -0.22
USP35-203ENST00000529308 PDCD11Q14690 1871 aaKnown RBP13.71□□□□□ -0.22
USP35-203ENST00000529308 SPG11Q96JI7 2443 aa13.7□□□□□ -0.22
USP35-203ENST00000529308 IGHV5-10-1A0A0J9YXX1 117 aa13.7□□□□□ -0.22
USP35-203ENST00000529308 TRIM64A6NGJ6 449 aa13.7□□□□□ -0.22
USP35-203ENST00000529308 OR3A4PP47883 348 aa13.7□□□□□ -0.22
USP35-203ENST00000529308 AICDAQ9GZX7 198 aa13.7□□□□□ -0.22
USP35-203ENST00000529308 PRR13Q9NZ81 148 aa13.7□□□□□ -0.22
USP35-203ENST00000529308 KLF13Q9Y2Y9 288 aaPredicted RBP13.7□□□□□ -0.22
USP35-203ENST00000529308 DOCK9Q9BZ29 2069 aa13.7□□□□□ -0.22
USP35-203ENST00000529308 PTP4A3O75365 173 aa13.7□□□□□ -0.22
USP35-203ENST00000529308 PLXDC2Q6UX71 529 aa13.7□□□□□ -0.22
USP35-203ENST00000529308 LGI3Q8N145 548 aa13.7□□□□□ -0.22
USP35-203ENST00000529308 TERB2Q8NHR7 220 aa13.7□□□□□ -0.22
USP35-203ENST00000529308 KIRREL1Q96J84 757 aa13.7□□□□□ -0.22
USP35-203ENST00000529308 AMELYQ99218 206 aa13.7□□□□□ -0.22
USP35-203ENST00000529308 SDHAF2Q9NX18 166 aa13.7□□□□□ -0.22
USP35-203ENST00000529308 HAO2Q9NYQ3 351 aa13.7□□□□□ -0.22
USP35-203ENST00000529308 PPP1R3CQ9UQK1 317 aa13.7□□□□□ -0.22
USP35-203ENST00000529308 SLC6A1P30531 599 aa13.7□□□□□ -0.22
USP35-203ENST00000529308 CD96P40200 585 aa13.7□□□□□ -0.22
USP35-203ENST00000529308 SELENOPP49908 381 aa13.7□□□□□ -0.22
USP35-203ENST00000529308 GPM6AP51674 278 aa13.7□□□□□ -0.22
USP35-203ENST00000529308 ZNF133P52736 654 aaPredicted RBP13.7□□□□□ -0.22
USP35-203ENST00000529308 TBC1D28Q2M2D7 210 aa13.7□□□□□ -0.22
USP35-203ENST00000529308 PXDC1Q5TGL8 231 aa13.7□□□□□ -0.22
USP35-203ENST00000529308 EXD3Q8N9H8 876 aa13.7□□□□□ -0.22
USP35-203ENST00000529308 RNF141Q8WVD5 230 aa13.7□□□□□ -0.22
USP35-203ENST00000529308 RTN4IP1Q8WWV3 396 aaPredicted RBP13.7□□□□□ -0.22
USP35-203ENST00000529308 CNTNAP3Q9BZ76 1288 aa13.7□□□□□ -0.22
USP35-203ENST00000529308 TPPPO94811 219 aa13.69□□□□□ -0.22
USP35-203ENST00000529308 PTGER4P35408 488 aa13.69□□□□□ -0.22
USP35-203ENST00000529308 LIMS1P48059 325 aa13.69□□□□□ -0.22
USP35-203ENST00000529308 PIGPP57054 158 aa13.69□□□□□ -0.22
USP35-203ENST00000529308 RPS4XP62701 263 aaKnown RBP13.69□□□□□ -0.22
USP35-203ENST00000529308 ALKBH6Q3KRA9 238 aa13.69□□□□□ -0.22
USP35-203ENST00000529308 FAM212BQ9NTI7 297 aaPredicted RBP13.69□□□□□ -0.22
USP35-203ENST00000529308 ICAM5Q9UMF0 924 aa13.69□□□□□ -0.22
USP35-203ENST00000529308 EFNB2P52799 333 aa13.69□□□□□ -0.22
USP35-203ENST00000529308 PLGLAQ15195 96 aa13.69□□□□□ -0.22
USP35-203ENST00000529308 SSX9Q7RTT3 188 aa13.69□□□□□ -0.22
USP35-203ENST00000529308 SHISA5Q8N114 240 aa13.69□□□□□ -0.22
USP35-203ENST00000529308 ZNF687Q8N1G0 1237 aa13.69□□□□□ -0.22
USP35-203ENST00000529308 FAAP24Q9BTP7 215 aa13.69□□□□□ -0.22
USP35-203ENST00000529308 ZNF275Q9NSD4 429 aaPredicted RBP13.69□□□□□ -0.22
USP35-203ENST00000529308 TMEM200CA6NKL6 621 aa13.69□□□□□ -0.22
USP35-203ENST00000529308 ZNF732B4DXR9 585 aa13.69□□□□□ -0.22
USP35-203ENST00000529308 OGG1O15527 345 aa13.69□□□□□ -0.22
USP35-203ENST00000529308 SUMF2Q8NBJ7 301 aa13.69□□□□□ -0.22
USP35-203ENST00000529308 SCARB1Q8WTV0 552 aa13.69□□□□□ -0.22
USP35-203ENST00000529308 NELFAQ9H3P2 528 aa13.69□□□□□ -0.22
USP35-203ENST00000529308 PLEKHA3Q9HB20 300 aa13.69□□□□□ -0.22
USP35-203ENST00000529308 EDARQ9UNE0 448 aa13.69□□□□□ -0.22
USP35-203ENST00000529308 RALGAPA1Q6GYQ0 2036 aa13.69□□□□□ -0.22
USP35-203ENST00000529308 MEIKINA0A087WXM9 373 aa13.69□□□□□ -0.22
USP35-203ENST00000529308 A0A1B0GTQ1 180 aa13.69□□□□□ -0.22
USP35-203ENST00000529308 D6RAR5 112 aa13.69□□□□□ -0.22
USP35-203ENST00000529308 NDUFB6O95139 128 aa13.69□□□□□ -0.22
USP35-203ENST00000529308 INHBBP09529 407 aa13.69□□□□□ -0.22
USP35-203ENST00000529308 TESK1Q15569 626 aa13.69□□□□□ -0.22
USP35-203ENST00000529308 TMEM268Q5VZI3 342 aa13.69□□□□□ -0.22
USP35-203ENST00000529308 OR1F12Q8NHA8 337 aa13.69□□□□□ -0.22
USP35-203ENST00000529308 OR10J5Q8NHC4 309 aa13.69□□□□□ -0.22
USP35-203ENST00000529308 RBMXL1Q96E39 390 aaKnown RBP13.69□□□□□ -0.22
USP35-203ENST00000529308 SLC25A31Q9H0C2 315 aa13.69□□□□□ -0.22
USP35-203ENST00000529308 C1orf196B1AJZ1 125 aa13.68□□□□□ -0.22
USP35-203ENST00000529308 IFNA1P01562 189 aa13.68□□□□□ -0.22
USP35-203ENST00000529308 ALDH3B1P43353 468 aa13.68□□□□□ -0.22
USP35-203ENST00000529308 RAB4BP61018 213 aa13.68□□□□□ -0.22
USP35-203ENST00000529308 MGAT2Q10469 447 aa13.68□□□□□ -0.22
USP35-203ENST00000529308 DHRS2Q13268 280 aa13.68□□□□□ -0.22
USP35-203ENST00000529308 SNTB1Q13884 538 aaKnown RBP13.68□□□□□ -0.22
USP35-203ENST00000529308 GSG1Q2KHT4 349 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms