RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 LHFPL4Q7Z7J7 247 aa15.32■□□□□ 0.04
SSRP1-204ENST00000529002 CROCCP2Q86T23 111 aa15.32■□□□□ 0.04
SSRP1-204ENST00000529002 OCSTAMPQ9BR26 566 aa15.32■□□□□ 0.04
SSRP1-204ENST00000529002 TMEM120AQ9BXJ8 343 aa15.32■□□□□ 0.04
SSRP1-204ENST00000529002 NDEL1Q9GZM8 345 aa15.32■□□□□ 0.04
SSRP1-204ENST00000529002 NSRP1Q9H0G5 558 aaKnown RBP15.32■□□□□ 0.04
SSRP1-204ENST00000529002 DYNC2H1Q8NCM8 4307 aaKnown RBP15.32■□□□□ 0.04
SSRP1-204ENST00000529002 TROVE2P10155 538 aaKnown RBP eCLIP15.31■□□□□ 0.04
SSRP1-204ENST00000529002 GRK5P34947 590 aa15.31■□□□□ 0.04
SSRP1-204ENST00000529002 GSK3BP49841 420 aa15.31■□□□□ 0.04
SSRP1-204ENST00000529002 RPS6KA3P51812 740 aa15.31■□□□□ 0.04
SSRP1-204ENST00000529002 COL10A1Q03692 680 aa15.31■□□□□ 0.04
SSRP1-204ENST00000529002 MZT1Q08AG7 82 aa15.31■□□□□ 0.04
SSRP1-204ENST00000529002 LYPD4Q6UWN0 246 aa15.31■□□□□ 0.04
SSRP1-204ENST00000529002 FAM185AQ8N0U4 392 aa15.31■□□□□ 0.04
SSRP1-204ENST00000529002 OR8J3Q8NGG0 315 aa15.31■□□□□ 0.04
SSRP1-204ENST00000529002 TSPEARQ8WU66 669 aa15.31■□□□□ 0.04
SSRP1-204ENST00000529002 SPTSSAQ969W0 71 aa15.31■□□□□ 0.04
SSRP1-204ENST00000529002 GAR1Q9NY12 217 aaKnown RBP15.31■□□□□ 0.04
SSRP1-204ENST00000529002 TRBV23-1A0A0A0MS06 115 aa15.3■□□□□ 0.04
SSRP1-204ENST00000529002 NKX6-3A6NJ46 265 aa15.3■□□□□ 0.04
SSRP1-204ENST00000529002 ANKRD30BLA7E2S9 258 aa15.3■□□□□ 0.04
SSRP1-204ENST00000529002 FAM220BPB1ANY3 271 aa15.3■□□□□ 0.04
SSRP1-204ENST00000529002 PEX14O75381 377 aa15.3■□□□□ 0.04
SSRP1-204ENST00000529002 PF4V1P10720 104 aa15.3■□□□□ 0.04
SSRP1-204ENST00000529002 HIST1H1CP16403 213 aaKnown RBP15.3■□□□□ 0.04
SSRP1-204ENST00000529002 COX7A1P24310 79 aa15.3■□□□□ 0.04
SSRP1-204ENST00000529002 OMPP47874 163 aa15.3■□□□□ 0.04
SSRP1-204ENST00000529002 BLCAPP62952 87 aa15.3■□□□□ 0.04
SSRP1-204ENST00000529002 CD83Q01151 205 aa15.3■□□□□ 0.04
SSRP1-204ENST00000529002 BLMHQ13867 455 aa15.3■□□□□ 0.04
SSRP1-204ENST00000529002 AANATQ16613 207 aa15.3■□□□□ 0.04
SSRP1-204ENST00000529002 SLC36A3Q495N2 470 aa15.3■□□□□ 0.04
SSRP1-204ENST00000529002 ANGPTL6Q8NI99 470 aa15.3■□□□□ 0.04
SSRP1-204ENST00000529002 RPL3LQ92901 407 aaKnown RBP15.3■□□□□ 0.04
SSRP1-204ENST00000529002 C12orf43Q96C57 262 aaKnown RBP15.3■□□□□ 0.04
SSRP1-204ENST00000529002 RAB3IPQ96QF0 476 aaPredicted RBP15.3■□□□□ 0.04
SSRP1-204ENST00000529002 SH3GL1Q99961 368 aa15.3■□□□□ 0.04
SSRP1-204ENST00000529002 TMBIM4Q9HC24 238 aa15.3■□□□□ 0.04
SSRP1-204ENST00000529002 TMEM5Q9Y2B1 443 aa15.3■□□□□ 0.04
SSRP1-204ENST00000529002 OR6C68A6NDL8 312 aa15.29■□□□□ 0.04
SSRP1-204ENST00000529002 TVP23AA6NH52 213 aa15.29■□□□□ 0.04
SSRP1-204ENST00000529002 UNC119BA6NIH7 251 aa15.29■□□□□ 0.04
SSRP1-204ENST00000529002 AKR7A2O43488 359 aa15.29■□□□□ 0.04
SSRP1-204ENST00000529002 ZNF682O95780 498 aa15.29■□□□□ 0.04
SSRP1-204ENST00000529002 RENP00797 406 aa15.29■□□□□ 0.04
SSRP1-204ENST00000529002 PF4P02776 101 aa15.29■□□□□ 0.04
SSRP1-204ENST00000529002 OTX1P32242 354 aaPredicted RBP15.29■□□□□ 0.04
SSRP1-204ENST00000529002 PYCR1P32322 319 aa15.29■□□□□ 0.04
SSRP1-204ENST00000529002 NAA10P41227 235 aaPredicted RBP15.29■□□□□ 0.04
SSRP1-204ENST00000529002 SLC35A2P78381 396 aa15.29■□□□□ 0.04
SSRP1-204ENST00000529002 MXRA7P84157 204 aa15.29■□□□□ 0.04
SSRP1-204ENST00000529002 CNN3Q15417 329 aaKnown RBP15.29■□□□□ 0.04
SSRP1-204ENST00000529002 SEC23BQ15437 767 aa15.29■□□□□ 0.04
SSRP1-204ENST00000529002 TCTEX1D4Q5JR98 221 aa15.29■□□□□ 0.04
SSRP1-204ENST00000529002 LIAT1Q6ZQX7 453 aa15.29■□□□□ 0.04
SSRP1-204ENST00000529002 CCDC121Q6ZUS5 278 aa15.29■□□□□ 0.04
SSRP1-204ENST00000529002 ZBTB46Q86UZ6 589 aa15.29■□□□□ 0.04
SSRP1-204ENST00000529002 ZNRF1Q8ND25 227 aa15.29■□□□□ 0.04
SSRP1-204ENST00000529002 OR2T12Q8NG77 320 aa15.29■□□□□ 0.04
SSRP1-204ENST00000529002 OR5AU1Q8NGC0 362 aa15.29■□□□□ 0.04
SSRP1-204ENST00000529002 ZNRF4Q8WWF5 429 aa15.29■□□□□ 0.04
SSRP1-204ENST00000529002 MUC13Q9H3R2 512 aa15.29■□□□□ 0.04
SSRP1-204ENST00000529002 INPP5EQ9NRR6 644 aa15.29■□□□□ 0.04
SSRP1-204ENST00000529002 C19orf12Q9NSK7 152 aa15.29■□□□□ 0.04
SSRP1-204ENST00000529002 TBX1O43435 398 aa15.28■□□□□ 0.04
SSRP1-204ENST00000529002 JUNBP17275 347 aaPredicted RBP15.28■□□□□ 0.04
SSRP1-204ENST00000529002 FAM3AP98173 230 aa15.28■□□□□ 0.04
SSRP1-204ENST00000529002 EGFEM1PQ0D2K5 195 aa15.28■□□□□ 0.04
SSRP1-204ENST00000529002 ARSJQ5FYB0 599 aaPredicted RBP15.28■□□□□ 0.04
SSRP1-204ENST00000529002 DRAM2Q6UX65 266 aa15.28■□□□□ 0.04
SSRP1-204ENST00000529002 SLC16A9Q7RTY1 509 aa15.28■□□□□ 0.04
SSRP1-204ENST00000529002 SDR9C7Q8NEX9 313 aa15.28■□□□□ 0.04
SSRP1-204ENST00000529002 OR5D13Q8NGL4 314 aa15.28■□□□□ 0.04
SSRP1-204ENST00000529002 PRSS22Q9GZN4 317 aa15.28■□□□□ 0.04
SSRP1-204ENST00000529002 FGF23Q9GZV9 251 aaPredicted RBP15.28■□□□□ 0.04
SSRP1-204ENST00000529002 TCF19Q9Y242 345 aa15.28■□□□□ 0.04
SSRP1-204ENST00000529002 PCDHGB5Q9Y5G0 923 aa15.28■□□□□ 0.04
SSRP1-204ENST00000529002 A6NDX4 124 aa15.27■□□□□ 0.04
SSRP1-204ENST00000529002 MRASO14807 208 aa15.27■□□□□ 0.04
SSRP1-204ENST00000529002 SIGLEC5O15389 551 aa15.27■□□□□ 0.04
SSRP1-204ENST00000529002 ACAA1P09110 424 aaPredicted RBP15.27■□□□□ 0.04
SSRP1-204ENST00000529002 FAHP16930 419 aa15.27■□□□□ 0.04
SSRP1-204ENST00000529002 GABRA2P47869 451 aa15.27■□□□□ 0.04
SSRP1-204ENST00000529002 CAV3P56539 151 aa15.27■□□□□ 0.04
SSRP1-204ENST00000529002 IFI44LQ53G44 452 aa15.27■□□□□ 0.04
SSRP1-204ENST00000529002 FGD3Q5JSP0 725 aa15.27■□□□□ 0.04
SSRP1-204ENST00000529002 SMARCD3Q6STE5 483 aa15.27■□□□□ 0.04
SSRP1-204ENST00000529002 C11orf42Q8N5U0 333 aa15.27■□□□□ 0.04
SSRP1-204ENST00000529002 TMEM185AQ8NFB2 350 aa15.27■□□□□ 0.04
SSRP1-204ENST00000529002 MED30Q96HR3 178 aa15.27■□□□□ 0.04
SSRP1-204ENST00000529002 RCC1LQ96I51 464 aaKnown RBP15.27■□□□□ 0.04
SSRP1-204ENST00000529002 HSH2DQ96JZ2 352 aa15.27■□□□□ 0.04
SSRP1-204ENST00000529002 COPS4Q9BT78 406 aa15.27■□□□□ 0.04
SSRP1-204ENST00000529002 TLNRD1Q9H1K6 362 aa15.27■□□□□ 0.04
SSRP1-204ENST00000529002 RHBDD3Q9Y3P4 386 aa15.27■□□□□ 0.04
SSRP1-204ENST00000529002 U3KQK5 164 aa15.27■□□□□ 0.04
SSRP1-204ENST00000529002 TRBV4-1A0A0J9YWV2 114 aa15.26■□□□□ 0.03
SSRP1-204ENST00000529002 ZNF823P16415 610 aa15.26■□□□□ 0.03
SSRP1-204ENST00000529002 VDAC2P45880 294 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms