RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 LSM2Q9Y333 95 aaKnown RBP6.8□□□□□ -1.32
SSBP3-211ENST00000528787 V9GYS6 101 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 COL12A1Q99715 3063 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 ANKRD61A6NGH8 418 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 TRIM64CA6NLI5 447 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 P2RY10O00398 339 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 PDCD5O14737 125 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 RGS9O75916 674 aaPredicted RBP6.79□□□□□ -1.32
SSBP3-211ENST00000528787 NRASP01111 189 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 CD55P08174 381 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 PAX1P15863 534 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 RAB3AP20336 220 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 CPT2P23786 658 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 MYL9P24844 172 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 LOXP28300 417 aaPredicted RBP6.79□□□□□ -1.32
SSBP3-211ENST00000528787 PSMB10P40306 273 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 RPL5P46777 297 aaKnown RBP6.79□□□□□ -1.32
SSBP3-211ENST00000528787 BMXP51813 675 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 FUT6P51993 359 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 ATP1B3P54709 279 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 GNG3P63215 75 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 SPOCK1Q08629 439 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 DOC2BQ14184 412 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 NEDD8Q15843 81 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 SWI5Q1ZZU3 235 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 CEACAM21Q3KPI0 293 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 SPATA46Q5T0L3 261 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 LIPKQ5VXJ0 399 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 FIP1L1Q6UN15 594 aaKnown RBP6.79□□□□□ -1.32
SSBP3-211ENST00000528787 LHFPL2Q6ZUX7 228 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 GPR141Q7Z602 305 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 NAA40Q86UY6 237 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 ZNF573Q86YE8 665 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 PHC2Q8IXK0 858 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 Q8IYB0 196 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 LRRC75A-AS1Q8N1F1 130 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 PRSS35Q8N3Z0 413 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 PARP16Q8N5Y8 322 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 OR56B2PQ8NGI1 322 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 OR2AE1Q8NHA4 323 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 ZNF671Q8TAW3 534 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 RPS4Y2Q8TD47 263 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 TMEM106AQ96A25 262 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 MBD6Q96DN6 1003 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 TIMD4Q96H15 378 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 HS3ST6Q96QI5 342 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 S100A13Q99584 98 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 SYT3Q9BQG1 590 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 SLC30A2Q9BRI3 323 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 ADAT1Q9BUB4 502 aaKnown RBP6.79□□□□□ -1.32
SSBP3-211ENST00000528787 TRAF4Q9BUZ4 470 aaPredicted RBP6.79□□□□□ -1.32
SSBP3-211ENST00000528787 MRPL37Q9BZE1 423 aaKnown RBP6.79□□□□□ -1.32
SSBP3-211ENST00000528787 CHST5Q9GZS9 411 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 CXXC4Q9H2H0 198 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 ZCCHC4Q9H5U6 513 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 FN3KRPQ9HA64 309 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 SAP30LQ9HAJ7 183 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 TCF7L1Q9HCS4 588 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 TMEM138Q9NPI0 162 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 NDUFA13Q9P0J0 144 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 ST6GALNAC2Q9UJ37 374 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 STUB1Q9UNE7 303 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 FOXJ3Q9UPW0 622 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 LAMP3Q9UQV4 416 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 PRR14LQ5THK1 2151 aa6.79□□□□□ -1.32
SSBP3-211ENST00000528787 RAI1Q7Z5J4 1906 aaPredicted RBP6.78□□□□□ -1.32
SSBP3-211ENST00000528787 TENM4Q6N022 2769 aa6.78□□□□□ -1.32
SSBP3-211ENST00000528787 A0A1B0GWJ7 208 aa6.78□□□□□ -1.32
SSBP3-211ENST00000528787 TRDV1A0A1B0GX56 115 aa6.78□□□□□ -1.32
SSBP3-211ENST00000528787 NDUFS8O00217 210 aa6.78□□□□□ -1.32
SSBP3-211ENST00000528787 SIAH2O43255 324 aa6.78□□□□□ -1.32
SSBP3-211ENST00000528787 SULT1B1O43704 296 aa6.78□□□□□ -1.32
SSBP3-211ENST00000528787 ZNF780AO75290 641 aaPredicted RBP6.78□□□□□ -1.32
SSBP3-211ENST00000528787 ALDOBP05062 364 aa6.78□□□□□ -1.32
SSBP3-211ENST00000528787 HEXAP06865 529 aa6.78□□□□□ -1.32
SSBP3-211ENST00000528787 DANCRP0C864 163 aa6.78□□□□□ -1.32
SSBP3-211ENST00000528787 FSTP19883 344 aa6.78□□□□□ -1.32
SSBP3-211ENST00000528787 PCMT1P22061 227 aa6.78□□□□□ -1.32
SSBP3-211ENST00000528787 FGF9P31371 208 aaPredicted RBP6.78□□□□□ -1.32
SSBP3-211ENST00000528787 CD200P41217 278 aa6.78□□□□□ -1.32
SSBP3-211ENST00000528787 RBP2P50120 134 aa6.78□□□□□ -1.32
SSBP3-211ENST00000528787 MMP15P51511 669 aa6.78□□□□□ -1.32
SSBP3-211ENST00000528787 EFNA4P52798 201 aa6.78□□□□□ -1.32
SSBP3-211ENST00000528787 TNFAIP6P98066 277 aaPredicted RBP6.78□□□□□ -1.32
SSBP3-211ENST00000528787 GPR176Q14439 515 aa6.78□□□□□ -1.32
SSBP3-211ENST00000528787 HLXQ14774 488 aaPredicted RBP6.78□□□□□ -1.32
SSBP3-211ENST00000528787 TSTQ16762 297 aaKnown RBP6.78□□□□□ -1.32
SSBP3-211ENST00000528787 HFEQ30201 348 aa6.78□□□□□ -1.32
SSBP3-211ENST00000528787 HSD17B12Q53GQ0 312 aa6.78□□□□□ -1.32
SSBP3-211ENST00000528787 PLCXD3Q63HM9 321 aa6.78□□□□□ -1.32
SSBP3-211ENST00000528787 OR2T2Q6IF00 324 aa6.78□□□□□ -1.32
SSBP3-211ENST00000528787 TPRA1Q86W33 373 aa6.78□□□□□ -1.32
SSBP3-211ENST00000528787 MKXQ8IYA7 352 aa6.78□□□□□ -1.32
SSBP3-211ENST00000528787 ZNF295-AS1Q8N0V1 137 aa6.78□□□□□ -1.32
SSBP3-211ENST00000528787 OR2Z1Q8NG97 314 aa6.78□□□□□ -1.32
SSBP3-211ENST00000528787 OR14K1Q8NGZ2 314 aa6.78□□□□□ -1.32
SSBP3-211ENST00000528787 PIGCQ92535 297 aa6.78□□□□□ -1.32
SSBP3-211ENST00000528787 MUL1Q969V5 352 aa6.78□□□□□ -1.32
SSBP3-211ENST00000528787 BORCS8Q96FH0 119 aa6.78□□□□□ -1.32
SSBP3-211ENST00000528787 OR5M11Q96RB7 305 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms