RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 CLDN11O75508 207 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 LYPLA2O95372 231 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 TDP2O95551 362 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 IFNA14P01570 189 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 HSD17B1P14061 328 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 G0S2P27469 103 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 ARR3P36575 388 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 ALDH3B2P48448 385 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 RPL34P49207 117 aaKnown RBP4.4□□□□□ -1.71
PCF11-202ENST00000528336 DAP3P51398 398 aaKnown RBP4.4□□□□□ -1.71
PCF11-202ENST00000528336 OR2B8PP59922 312 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 LSM6P62312 80 aaKnown RBP4.4□□□□□ -1.71
PCF11-202ENST00000528336 RPL8P62917 257 aaKnown RBP4.4□□□□□ -1.71
PCF11-202ENST00000528336 TAL2Q16559 108 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 CNPY1Q3B7I2 92 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 FAM120AOSQ5T036 256 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 FRMPD2BQ6IN97 320 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 IFNEQ86WN2 208 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 PLA2G4DQ86XP0 818 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 ZNF547Q8IVP9 402 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 GPD1LQ8N335 351 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 STPG2Q8N412 459 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 BPIFB2Q8N4F0 458 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 ZNF491Q8N8L2 437 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 BEST4Q8NFU0 473 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 OR4K2Q8NGD2 314 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 OR5B17Q8NGF7 314 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 OR6Q1Q8NGQ2 317 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 OR6K6Q8NGW6 343 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 OR51F2Q8NH61 342 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 PPTC7Q8NI37 304 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 RNASEH2CQ8TDP1 164 aaKnown RBP4.4□□□□□ -1.71
PCF11-202ENST00000528336 PTH2Q96A98 100 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 CEP19Q96LK0 163 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 NOL4LQ96MY1 436 aaPredicted RBP4.4□□□□□ -1.71
PCF11-202ENST00000528336 HBEGFQ99075 208 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 CIB1Q99828 191 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 KLHDC3Q9BQ90 382 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 BCL2L14Q9BZR8 327 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 REEP4Q9H6H4 257 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 PRR34Q9NV39 138 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 HRASLS2Q9NWW9 162 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 TFR2Q9UP52 801 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 ZNFX1Q9P2E3 1918 aaKnown RBP4.4□□□□□ -1.71
PCF11-202ENST00000528336 LRRC37A2A6NM11 1700 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 NFASCO94856 1347 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 ANKRD20A5PA0PJZ0 165 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 TVP23AA6NH52 213 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 ZNF233A6NK53 670 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 HIDE1A8MVS5 230 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 G3V3Y1 287 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 SULT1C2O00338 296 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 PLPP1O14494 284 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 MRPS12O15235 138 aaKnown RBP4.39□□□□□ -1.71
PCF11-202ENST00000528336 FGF16O43320 207 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 SLC37A4O43826 429 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 ZNF253O75346 499 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 MPDU1O75352 247 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 IGKV3-15P01624 115 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 HBE1P02100 147 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 THY1P04216 161 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 LGALS2P05162 132 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 FGF1P05230 155 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 C2P06681 752 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 OR1E1P30953 314 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 FGF9P31371 208 aaPredicted RBP4.39□□□□□ -1.71
PCF11-202ENST00000528336 RBM34P42696 430 aaKnown RBP4.39□□□□□ -1.71
PCF11-202ENST00000528336 MAGEA3P43357 314 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 HNRNPA3P51991 378 aaKnown RBP4.39□□□□□ -1.71
PCF11-202ENST00000528336 UGT2B15P54855 530 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 OR5I1Q13606 314 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 TMED2Q15363 201 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 GCSAMLQ5JQS6 135 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 ATAD3CQ5T2N8 411 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 DUPD1Q68J44 220 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 OR8G2PQ6IF36 304 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 ANKRD26P1Q6NSI1 321 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 NIPAL1Q6NVV3 410 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 DNM1P34Q6PK57 102 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 CD177Q8N6Q3 437 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 ATP6V0D2Q8N8Y2 350 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 RAB3CQ96E17 227 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 RBBP8Q99708 897 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 BEX2Q9BXY8 128 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 ZSCAN16Q9H4T2 348 aaPredicted RBP4.39□□□□□ -1.71
PCF11-202ENST00000528336 BEX1Q9HBH7 125 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 AGPAT4Q9NRZ5 378 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 SEC14L4Q9UDX3 406 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 TMCO1Q9UM00 188 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 AP3M1Q9Y2T2 418 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 MMACHCQ9Y4U1 282 aa4.39□□□□□ -1.71
PCF11-202ENST00000528336 MCM3APO60318 1980 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 TRBV7-9A0A0J9YWB2 115 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 A0A1B0GVI7 797 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 ZNF487B1APH4 448 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 H7C0C1 242 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 LAD1O00515 517 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 ACOX3O15254 700 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 ATP8B1O43520 1251 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 TRAPPC6AO75865 159 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms