RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 DANCRP0C864 163 aa12.99□□□□□ -0.33
CAPN1-214ENST00000528165 BCKDHBP21953 392 aa12.99□□□□□ -0.33
CAPN1-214ENST00000528165 RPS10P46783 165 aaKnown RBP12.99□□□□□ -0.33
CAPN1-214ENST00000528165 UCP2P55851 309 aa12.99□□□□□ -0.33
CAPN1-214ENST00000528165 PYY3Q5JQD4 70 aa12.99□□□□□ -0.33
CAPN1-214ENST00000528165 ARMC6Q6NXE6 501 aa12.99□□□□□ -0.33
CAPN1-214ENST00000528165 RPUSD3Q6P087 351 aaKnown RBP12.99□□□□□ -0.33
CAPN1-214ENST00000528165 SFTPA2Q8IWL1 248 aa12.99□□□□□ -0.33
CAPN1-214ENST00000528165 METTL27Q8N6F8 245 aaPredicted RBP12.99□□□□□ -0.33
CAPN1-214ENST00000528165 AVL9Q8NBF6 648 aa12.99□□□□□ -0.33
CAPN1-214ENST00000528165 ZNF248Q8NDW4 579 aa12.99□□□□□ -0.33
CAPN1-214ENST00000528165 ARHGAP5-AS1Q96IT6 56 aa12.99□□□□□ -0.33
CAPN1-214ENST00000528165 PBOV1Q9GZY1 135 aa12.99□□□□□ -0.33
CAPN1-214ENST00000528165 SRPK3Q9UPE1 567 aa12.99□□□□□ -0.33
CAPN1-214ENST00000528165 FBXO7Q9Y3I1 522 aa12.99□□□□□ -0.33
CAPN1-214ENST00000528165 TMED7-TICAM2A0A0A6YYA0 188 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 A8MVM7 634 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 PRH1P02810 166 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 PGCP20142 388 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 CDX1P47902 265 aaPredicted RBP12.98□□□□□ -0.33
CAPN1-214ENST00000528165 TAS2R46P59540 309 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 RAP1AP62834 184 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 ZNF239Q16600 458 aaKnown RBP12.98□□□□□ -0.33
CAPN1-214ENST00000528165 LCN10Q6JVE6 187 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 ADAMTS18Q8TE60 1221 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 RHBDD1Q8TEB9 315 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 RNF133Q8WVZ7 376 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 BORCS7-ASMTA0A0B4J1R7 106 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 LY86O95711 162 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 SCGB1D2O95969 90 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 IFNA21P01568 189 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 SEC11BP0C7V7 166 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 OR13C7P0DN81 318 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 HLA-DOBP13765 273 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 SNU13P55769 128 aaKnown RBP12.98□□□□□ -0.33
CAPN1-214ENST00000528165 TMEM50BP56557 158 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 HSD17B7P56937 341 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 RNF144BQ7Z419 303 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 ZNF383Q8NA42 475 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 ERGIC1Q969X5 290 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 MMABQ96EY8 250 aaPredicted RBP12.98□□□□□ -0.33
CAPN1-214ENST00000528165 GAL3ST4Q96RP7 486 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 PNO1Q9NRX1 252 aaKnown RBP12.98□□□□□ -0.33
CAPN1-214ENST00000528165 C19orf12Q9NSK7 152 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 PPP4R1LQ9P1A2 415 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 CRTAPO75718 401 aaPredicted RBP12.98□□□□□ -0.33
CAPN1-214ENST00000528165 AHSA1O95433 338 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 FHITP49789 147 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 POLR2HP52434 150 aaKnown RBP12.98□□□□□ -0.33
CAPN1-214ENST00000528165 SLC37A1P57057 533 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 RPS23P62266 143 aaKnown RBP12.98□□□□□ -0.33
CAPN1-214ENST00000528165 FOXK1P85037 733 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 PCK2Q16822 640 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 PRTGQ2VWP7 1150 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 TANGO2Q6ICL3 276 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 HEPN1Q6WQI6 88 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 MAFIPQ8WZ33 124 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 OR11A1Q9GZK7 315 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 OR8D2Q9GZM6 311 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 PLEKHA2Q9HB19 425 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 UFSP2Q9NUQ7 469 aa12.98□□□□□ -0.33
CAPN1-214ENST00000528165 GAR1Q9NY12 217 aaKnown RBP12.98□□□□□ -0.33
CAPN1-214ENST00000528165 C5orf42Q9H799 3197 aa12.97□□□□□ -0.33
CAPN1-214ENST00000528165 A6NIZ1 184 aa12.97□□□□□ -0.33
CAPN1-214ENST00000528165 ITGA3P26006 1051 aa12.97□□□□□ -0.33
CAPN1-214ENST00000528165 CHATP28329 748 aa12.97□□□□□ -0.33
CAPN1-214ENST00000528165 IL12BP29460 328 aa12.97□□□□□ -0.33
CAPN1-214ENST00000528165 PTGER4P35408 488 aa12.97□□□□□ -0.33
CAPN1-214ENST00000528165 MAS1LP35410 378 aa12.97□□□□□ -0.33
CAPN1-214ENST00000528165 OR3A4PP47883 348 aa12.97□□□□□ -0.33
CAPN1-214ENST00000528165 NDUFA6P56556 154 aa12.97□□□□□ -0.33
CAPN1-214ENST00000528165 RAP1BP61224 184 aa12.97□□□□□ -0.33
CAPN1-214ENST00000528165 SLC35A1P78382 337 aa12.97□□□□□ -0.33
CAPN1-214ENST00000528165 FAM189A2Q15884 450 aa12.97□□□□□ -0.33
CAPN1-214ENST00000528165 ZNF529Q6P280 563 aa12.97□□□□□ -0.33
CAPN1-214ENST00000528165 COMMD2Q86X83 199 aa12.97□□□□□ -0.33
CAPN1-214ENST00000528165 SLAMF9Q96A28 289 aa12.97□□□□□ -0.33
CAPN1-214ENST00000528165 SLAMF6Q96DU3 332 aa12.97□□□□□ -0.33
CAPN1-214ENST00000528165 CYYR1Q96J86 154 aa12.97□□□□□ -0.33
CAPN1-214ENST00000528165 BMFQ96LC9 184 aa12.97□□□□□ -0.33
CAPN1-214ENST00000528165 S100A13Q99584 98 aa12.97□□□□□ -0.33
CAPN1-214ENST00000528165 URM1Q9BTM9 101 aaKnown RBP12.97□□□□□ -0.33
CAPN1-214ENST00000528165 PUS1Q9Y606 427 aaKnown RBP eCLIP12.97□□□□□ -0.33
CAPN1-214ENST00000528165 A0A1W2PP11 408 aa12.97□□□□□ -0.33
CAPN1-214ENST00000528165 NPIPA5E9PKD4 350 aa12.97□□□□□ -0.33
CAPN1-214ENST00000528165 DHPSP49366 369 aaPredicted RBP12.97□□□□□ -0.33
CAPN1-214ENST00000528165 SURF2Q15527 256 aaPredicted RBP12.97□□□□□ -0.33
CAPN1-214ENST00000528165 C14orf28Q4W4Y0 310 aa12.97□□□□□ -0.33
CAPN1-214ENST00000528165 CLEC9AQ6UXN8 241 aa12.97□□□□□ -0.33
CAPN1-214ENST00000528165 TTLL10Q6ZVT0 673 aa12.97□□□□□ -0.33
CAPN1-214ENST00000528165 C19orf47Q8N9M1 422 aaKnown RBP12.97□□□□□ -0.33
CAPN1-214ENST00000528165 PNLDC1Q8NA58 520 aaKnown RBP12.97□□□□□ -0.33
CAPN1-214ENST00000528165 OR10H5Q8NGA6 315 aa12.97□□□□□ -0.33
CAPN1-214ENST00000528165 SLC25A43Q8WUT9 341 aaPredicted RBP12.97□□□□□ -0.33
CAPN1-214ENST00000528165 SLC46A1Q96NT5 459 aa12.97□□□□□ -0.33
CAPN1-214ENST00000528165 GNRHR2Q96P88 292 aa12.97□□□□□ -0.33
CAPN1-214ENST00000528165 TBL1XR1Q9BZK7 514 aa12.97□□□□□ -0.33
CAPN1-214ENST00000528165 CHST5Q9GZS9 411 aa12.97□□□□□ -0.33
CAPN1-214ENST00000528165 CUTCQ9NTM9 273 aa12.97□□□□□ -0.33
CAPN1-214ENST00000528165 NPIPA1Q9UND3 350 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms