RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 AURKCQ9UQB9 309 aa9.04□□□□□ -0.96
CSMD1-210ENST00000521646 TMEM5Q9Y2B1 443 aa9.04□□□□□ -0.96
CSMD1-210ENST00000521646 ZNF281Q9Y2X9 895 aa9.04□□□□□ -0.96
CSMD1-210ENST00000521646 V9GYQ6 96 aa9.04□□□□□ -0.96
CSMD1-210ENST00000521646 HMGB1P1B2RPK0 211 aaPredicted RBP9.03□□□□□ -0.96
CSMD1-210ENST00000521646 ARPC3O15145 178 aa9.03□□□□□ -0.96
CSMD1-210ENST00000521646 CLUP10909 449 aa9.03□□□□□ -0.96
CSMD1-210ENST00000521646 COX4I1P13073 169 aa9.03□□□□□ -0.96
CSMD1-210ENST00000521646 IRF2P14316 349 aa9.03□□□□□ -0.96
CSMD1-210ENST00000521646 GSSP48637 474 aa9.03□□□□□ -0.96
CSMD1-210ENST00000521646 RPL15P61313 204 aaKnown RBP9.03□□□□□ -0.96
CSMD1-210ENST00000521646 PDCD1Q15116 288 aa9.03□□□□□ -0.96
CSMD1-210ENST00000521646 CDONQ4KMG0 1287 aa9.03□□□□□ -0.96
CSMD1-210ENST00000521646 WDR82Q6UXN9 313 aa9.03□□□□□ -0.96
CSMD1-210ENST00000521646 C1orf122Q6ZSJ8 110 aa9.03□□□□□ -0.96
CSMD1-210ENST00000521646 PRSS45Q7RTY3 260 aa9.03□□□□□ -0.96
CSMD1-210ENST00000521646 MRPL21Q7Z2W9 205 aaKnown RBP9.03□□□□□ -0.96
CSMD1-210ENST00000521646 LYG1Q8N1E2 194 aa9.03□□□□□ -0.96
CSMD1-210ENST00000521646 SPRYD4Q8WW59 207 aaPredicted RBP9.03□□□□□ -0.96
CSMD1-210ENST00000521646 RORBQ92753 470 aa9.03□□□□□ -0.96
CSMD1-210ENST00000521646 AMELYQ99218 206 aa9.03□□□□□ -0.96
CSMD1-210ENST00000521646 SIKE1Q9BRV8 207 aa9.03□□□□□ -0.96
CSMD1-210ENST00000521646 CNTD2Q9H8S5 307 aa9.03□□□□□ -0.96
CSMD1-210ENST00000521646 ELL3Q9HB65 397 aaPredicted RBP9.03□□□□□ -0.96
CSMD1-210ENST00000521646 GID8Q9NWU2 228 aa9.03□□□□□ -0.96
CSMD1-210ENST00000521646 ABCD2Q9UBJ2 740 aa9.03□□□□□ -0.96
CSMD1-210ENST00000521646 VPREB3Q9UKI3 123 aa9.03□□□□□ -0.96
CSMD1-210ENST00000521646 CAPN7Q9Y6W3 813 aa9.03□□□□□ -0.96
CSMD1-210ENST00000521646 BHLHE40O14503 412 aa9.02□□□□□ -0.97
CSMD1-210ENST00000521646 CHST1O43916 411 aa9.02□□□□□ -0.97
CSMD1-210ENST00000521646 GYPBP06028 91 aa9.02□□□□□ -0.97
CSMD1-210ENST00000521646 LIPFP07098 398 aa9.02□□□□□ -0.97
CSMD1-210ENST00000521646 TROVE2P10155 538 aaKnown RBP eCLIP9.02□□□□□ -0.97
CSMD1-210ENST00000521646 RHCEP18577 417 aa9.02□□□□□ -0.97
CSMD1-210ENST00000521646 CRABP1P29762 137 aa9.02□□□□□ -0.97
CSMD1-210ENST00000521646 RPS6KA3P51812 740 aa9.02□□□□□ -0.97
CSMD1-210ENST00000521646 PRKXP51817 358 aa9.02□□□□□ -0.97
CSMD1-210ENST00000521646 EFNB2P52799 333 aa9.02□□□□□ -0.97
CSMD1-210ENST00000521646 ERVFRD-1P60508 538 aa9.02□□□□□ -0.97
CSMD1-210ENST00000521646 FAM3AP98173 230 aa9.02□□□□□ -0.97
CSMD1-210ENST00000521646 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.02□□□□□ -0.97
CSMD1-210ENST00000521646 DGUOKQ16854 277 aa9.02□□□□□ -0.97
CSMD1-210ENST00000521646 KRTAP19-4Q3LI73 84 aa9.02□□□□□ -0.97
CSMD1-210ENST00000521646 FBLN7Q53RD9 439 aa9.02□□□□□ -0.97
CSMD1-210ENST00000521646 CD276Q5ZPR3 534 aa9.02□□□□□ -0.97
CSMD1-210ENST00000521646 STUMQ69YW2 141 aa9.02□□□□□ -0.97
CSMD1-210ENST00000521646 LINC00471Q8N535 108 aa9.02□□□□□ -0.97
CSMD1-210ENST00000521646 RNF148Q8N7C7 305 aa9.02□□□□□ -0.97
CSMD1-210ENST00000521646 PNLDC1Q8NA58 520 aaKnown RBP9.02□□□□□ -0.97
CSMD1-210ENST00000521646 SCCPDHQ8NBX0 429 aa9.02□□□□□ -0.97
CSMD1-210ENST00000521646 OR9Q1Q8NGQ5 310 aa9.02□□□□□ -0.97
CSMD1-210ENST00000521646 TBC1D15Q8TC07 691 aa9.02□□□□□ -0.97
CSMD1-210ENST00000521646 LRRC29Q8WV35 223 aa9.02□□□□□ -0.97
CSMD1-210ENST00000521646 SPSB4Q96A44 273 aa9.02□□□□□ -0.97
CSMD1-210ENST00000521646 DCAF13Q9NV06 445 aaKnown RBP9.02□□□□□ -0.97
CSMD1-210ENST00000521646 GFOD1Q9NXC2 390 aa9.02□□□□□ -0.97
CSMD1-210ENST00000521646 MRPL15Q9P015 296 aaKnown RBP9.02□□□□□ -0.97
CSMD1-210ENST00000521646 ONECUT1Q9UBC0 465 aa9.02□□□□□ -0.97
CSMD1-210ENST00000521646 COMMD3-BMI1R4GMX3 469 aa9.02□□□□□ -0.97
CSMD1-210ENST00000521646 TRAV38-1A0A0B4J264 116 aa9.01□□□□□ -0.97
CSMD1-210ENST00000521646 A6NLC8 198 aa9.01□□□□□ -0.97
CSMD1-210ENST00000521646 NPFFO15130 113 aa9.01□□□□□ -0.97
CSMD1-210ENST00000521646 GMDSO60547 372 aa9.01□□□□□ -0.97
CSMD1-210ENST00000521646 ACKR3P25106 362 aa9.01□□□□□ -0.97
CSMD1-210ENST00000521646 SAA4P35542 130 aa9.01□□□□□ -0.97
CSMD1-210ENST00000521646 MSX2P35548 267 aaPredicted RBP9.01□□□□□ -0.97
CSMD1-210ENST00000521646 TGM4P49221 684 aa9.01□□□□□ -0.97
CSMD1-210ENST00000521646 GMFBP60983 142 aa9.01□□□□□ -0.97
CSMD1-210ENST00000521646 MXRA7P84157 204 aa9.01□□□□□ -0.97
CSMD1-210ENST00000521646 DHRS7BQ6IAN0 325 aaPredicted RBP9.01□□□□□ -0.97
CSMD1-210ENST00000521646 PGBD2Q6P3X8 592 aa9.01□□□□□ -0.97
CSMD1-210ENST00000521646 METAP1DQ6UB28 335 aaPredicted RBP9.01□□□□□ -0.97
CSMD1-210ENST00000521646 DCXRQ7Z4W1 244 aa9.01□□□□□ -0.97
CSMD1-210ENST00000521646 OR1M1Q8NGA1 313 aa9.01□□□□□ -0.97
CSMD1-210ENST00000521646 PIFOQ8TCI5 191 aa9.01□□□□□ -0.97
CSMD1-210ENST00000521646 CFHR4Q92496 578 aa9.01□□□□□ -0.97
CSMD1-210ENST00000521646 FAM162AQ96A26 154 aa9.01□□□□□ -0.97
CSMD1-210ENST00000521646 SGK3Q96BR1 496 aa9.01□□□□□ -0.97
CSMD1-210ENST00000521646 GAFA1Q96PS6 74 aa9.01□□□□□ -0.97
CSMD1-210ENST00000521646 BTBD10Q9BSF8 475 aa9.01□□□□□ -0.97
CSMD1-210ENST00000521646 DCTN5Q9BTE1 182 aa9.01□□□□□ -0.97
CSMD1-210ENST00000521646 IFT27Q9BW83 186 aa9.01□□□□□ -0.97
CSMD1-210ENST00000521646 PPA2Q9H2U2 334 aa9.01□□□□□ -0.97
CSMD1-210ENST00000521646 SNTG1Q9NSN8 517 aa9.01□□□□□ -0.97
CSMD1-210ENST00000521646 PRPF19Q9UMS4 504 aaKnown RBP9.01□□□□□ -0.97
CSMD1-210ENST00000521646 RHBDD3Q9Y3P4 386 aa9.01□□□□□ -0.97
CSMD1-210ENST00000521646 N6AMT1Q9Y5N5 214 aa9.01□□□□□ -0.97
CSMD1-210ENST00000521646 KPTNQ9Y664 436 aa9.01□□□□□ -0.97
CSMD1-210ENST00000521646 hCG_38984A0A1B0GV85 526 aa9□□□□□ -0.97
CSMD1-210ENST00000521646 hCG_1807616A0A1W2PRN6 198 aa9□□□□□ -0.97
CSMD1-210ENST00000521646 TMEM82A0PJX8 343 aa9□□□□□ -0.97
CSMD1-210ENST00000521646 GGT3PA6NGU5 568 aa9□□□□□ -0.97
CSMD1-210ENST00000521646 OPN1MWP04001 364 aa9□□□□□ -0.97
CSMD1-210ENST00000521646 VIMP08670 466 aaKnown RBP9□□□□□ -0.97
CSMD1-210ENST00000521646 OPN1MW2P0DN77 364 aa9□□□□□ -0.97
CSMD1-210ENST00000521646 OPN1MW3P0DN78 364 aa9□□□□□ -0.97
CSMD1-210ENST00000521646 H2AFXP16104 143 aaPredicted RBP9□□□□□ -0.97
CSMD1-210ENST00000521646 IFNA8P32881 189 aa9□□□□□ -0.97
CSMD1-210ENST00000521646 TPTEP56180 551 aa9□□□□□ -0.97
CSMD1-210ENST00000521646 ECH1Q13011 328 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms