RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 GMPPBQ9Y5P6 360 aa17.31■□□□□ 0.36
TRIM35-203ENST00000521253 A0A1W2PQL4 384 aaPredicted RBP17.3■□□□□ 0.36
TRIM35-203ENST00000521253 IFNA2P01563 188 aa17.3■□□□□ 0.36
TRIM35-203ENST00000521253 SNCBQ16143 134 aa17.3■□□□□ 0.36
TRIM35-203ENST00000521253 ZNF404Q494X3 552 aa17.3■□□□□ 0.36
TRIM35-203ENST00000521253 ZNF826PQ6ZT77 177 aa17.3■□□□□ 0.36
TRIM35-203ENST00000521253 WDR86Q86TI4 376 aa17.3■□□□□ 0.36
TRIM35-203ENST00000521253 C19orf18Q8NEA5 215 aa17.3■□□□□ 0.36
TRIM35-203ENST00000521253 OR10H4Q8NGA5 316 aa17.3■□□□□ 0.36
TRIM35-203ENST00000521253 OR51E1Q8TCB6 317 aa17.3■□□□□ 0.36
TRIM35-203ENST00000521253 TMEM246Q9BRR3 403 aa17.3■□□□□ 0.36
TRIM35-203ENST00000521253 GPR84Q9NQS5 396 aa17.3■□□□□ 0.36
TRIM35-203ENST00000521253 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.3■□□□□ 0.36
TRIM35-203ENST00000521253 R4GMQ9 66 aa17.3■□□□□ 0.36
TRIM35-203ENST00000521253 A6NLC8 198 aa17.29■□□□□ 0.36
TRIM35-203ENST00000521253 ZNF850A8MQ14 1090 aa17.29■□□□□ 0.36
TRIM35-203ENST00000521253 LOC110117498-PIK3R3F6TDL0 507 aa17.29■□□□□ 0.36
TRIM35-203ENST00000521253 FOXH1O75593 365 aa17.29■□□□□ 0.36
TRIM35-203ENST00000521253 CST4P01036 141 aa17.29■□□□□ 0.36
TRIM35-203ENST00000521253 IGLV3-1P01715 115 aa17.29■□□□□ 0.36
TRIM35-203ENST00000521253 PRDX4Q13162 271 aa17.29■□□□□ 0.36
TRIM35-203ENST00000521253 OCLNQ16625 522 aa17.29■□□□□ 0.36
TRIM35-203ENST00000521253 ZSCAN26Q16670 478 aa17.29■□□□□ 0.36
TRIM35-203ENST00000521253 COMMD2Q86X83 199 aa17.29■□□□□ 0.36
TRIM35-203ENST00000521253 OR1M1Q8NGA1 313 aa17.29■□□□□ 0.36
TRIM35-203ENST00000521253 ITPKCQ96DU7 683 aa17.29■□□□□ 0.36
TRIM35-203ENST00000521253 MOB1AQ9H8S9 216 aa17.29■□□□□ 0.36
TRIM35-203ENST00000521253 AASSQ9UDR5 926 aa17.29■□□□□ 0.36
TRIM35-203ENST00000521253 GTF2A1LQ9UNN4 478 aa17.29■□□□□ 0.36
TRIM35-203ENST00000521253 MPC1Q9Y5U8 109 aa17.29■□□□□ 0.36
TRIM35-203ENST00000521253 A0A0G2JMP0 313 aa17.28■□□□□ 0.36
TRIM35-203ENST00000521253 A0A0X1KG70 313 aa17.28■□□□□ 0.36
TRIM35-203ENST00000521253 TTRP02766 147 aa17.28■□□□□ 0.36
TRIM35-203ENST00000521253 KRT8P05787 483 aa17.28■□□□□ 0.36
TRIM35-203ENST00000521253 WNT2P09544 360 aa17.28■□□□□ 0.36
TRIM35-203ENST00000521253 RPS2P15880 293 aaKnown RBP17.28■□□□□ 0.36
TRIM35-203ENST00000521253 GABRB1P18505 474 aa17.28■□□□□ 0.36
TRIM35-203ENST00000521253 SRP14P37108 136 aaKnown RBP17.28■□□□□ 0.36
TRIM35-203ENST00000521253 MTNR1AP48039 350 aa17.28■□□□□ 0.36
TRIM35-203ENST00000521253 IL5RAQ01344 420 aa17.28■□□□□ 0.36
TRIM35-203ENST00000521253 BCL2L15Q5TBC7 163 aa17.28■□□□□ 0.36
TRIM35-203ENST00000521253 DCAF12L2Q5VW00 463 aa17.28■□□□□ 0.36
TRIM35-203ENST00000521253 MEDAGQ5VYS4 303 aa17.28■□□□□ 0.36
TRIM35-203ENST00000521253 C11orf53Q8IXP5 236 aa17.28■□□□□ 0.36
TRIM35-203ENST00000521253 GALNT4Q8N4A0 578 aa17.28■□□□□ 0.36
TRIM35-203ENST00000521253 BOLLQ8N9W6 283 aaKnown RBP17.28■□□□□ 0.36
TRIM35-203ENST00000521253 DEFB108BQ8NET1 73 aa17.28■□□□□ 0.36
TRIM35-203ENST00000521253 OR4M2Q8NGB6 313 aa17.28■□□□□ 0.36
TRIM35-203ENST00000521253 PIGCQ92535 297 aa17.28■□□□□ 0.36
TRIM35-203ENST00000521253 FAM71F1Q96KD3 344 aaPredicted RBP17.28■□□□□ 0.36
TRIM35-203ENST00000521253 MICU1Q9BPX6 476 aa17.28■□□□□ 0.36
TRIM35-203ENST00000521253 OR52A1Q9UKL2 312 aa17.28■□□□□ 0.36
TRIM35-203ENST00000521253 hCG_1807616A0A1W2PRN6 198 aa17.27■□□□□ 0.36
TRIM35-203ENST00000521253 ANXA2P2A6NMY6 339 aa17.27■□□□□ 0.36
TRIM35-203ENST00000521253 ANKRD65E5RJM6 399 aa17.27■□□□□ 0.36
TRIM35-203ENST00000521253 RPP14O95059 124 aaKnown RBP17.27■□□□□ 0.36
TRIM35-203ENST00000521253 AVPP01185 164 aa17.27■□□□□ 0.36
TRIM35-203ENST00000521253 CD80P33681 288 aa17.27■□□□□ 0.36
TRIM35-203ENST00000521253 MAP2K3P46734 347 aa17.27■□□□□ 0.36
TRIM35-203ENST00000521253 CSNK2BP67870 215 aa17.27■□□□□ 0.36
TRIM35-203ENST00000521253 ZNF154Q13106 437 aa17.27■□□□□ 0.36
TRIM35-203ENST00000521253 ESCO2Q56NI9 601 aa17.27■□□□□ 0.36
TRIM35-203ENST00000521253 ZNF684Q5T5D7 378 aa17.27■□□□□ 0.36
TRIM35-203ENST00000521253 SFRP4Q6FHJ7 346 aaPredicted RBP17.27■□□□□ 0.36
TRIM35-203ENST00000521253 C1orf229Q6ZS94 237 aaPredicted RBP17.27■□□□□ 0.36
TRIM35-203ENST00000521253 ENTHD1Q8IYW4 607 aa17.27■□□□□ 0.36
TRIM35-203ENST00000521253 ELMOD2Q8IZ81 293 aa17.27■□□□□ 0.36
TRIM35-203ENST00000521253 YIPF7Q8N8F6 280 aa17.27■□□□□ 0.36
TRIM35-203ENST00000521253 SEMA6DQ8NFY4 1073 aa17.27■□□□□ 0.36
TRIM35-203ENST00000521253 OR5P3Q8WZ94 311 aa17.27■□□□□ 0.36
TRIM35-203ENST00000521253 RNFT2Q96EX2 444 aa17.27■□□□□ 0.36
TRIM35-203ENST00000521253 TMPRSS13Q9BYE2 586 aa17.27■□□□□ 0.36
TRIM35-203ENST00000521253 FGF23Q9GZV9 251 aaPredicted RBP17.27■□□□□ 0.36
TRIM35-203ENST00000521253 METTL17Q9H7H0 456 aaPredicted RBP17.27■□□□□ 0.36
TRIM35-203ENST00000521253 ABCB9Q9NP78 766 aa17.27■□□□□ 0.36
TRIM35-203ENST00000521253 FAM118AQ9NWS6 357 aa17.27■□□□□ 0.36
TRIM35-203ENST00000521253 MIOXQ9UGB7 285 aa17.27■□□□□ 0.36
TRIM35-203ENST00000521253 SNX5Q9Y5X3 404 aa17.27■□□□□ 0.36
TRIM35-203ENST00000521253 ZNF816-ZNF321PA0A0X1KG74 233 aa17.26■□□□□ 0.35
TRIM35-203ENST00000521253 LOC100130705A0A1B0GUX0 176 aa17.26■□□□□ 0.35
TRIM35-203ENST00000521253 METTL15A6NJ78 407 aa17.26■□□□□ 0.35
TRIM35-203ENST00000521253 A8MXK9 166 aa17.26■□□□□ 0.35
TRIM35-203ENST00000521253 C3orf80F5H4A9 247 aa17.26■□□□□ 0.35
TRIM35-203ENST00000521253 LGALS8O00214 317 aa17.26■□□□□ 0.35
TRIM35-203ENST00000521253 PHF1O43189 567 aaPredicted RBP17.26■□□□□ 0.35
TRIM35-203ENST00000521253 SULT1C4O75897 302 aa17.26■□□□□ 0.35
TRIM35-203ENST00000521253 ATP6V1B1P15313 513 aa17.26■□□□□ 0.35
TRIM35-203ENST00000521253 GATA3P23771 443 aa17.26■□□□□ 0.35
TRIM35-203ENST00000521253 CPT2P23786 658 aa17.26■□□□□ 0.35
TRIM35-203ENST00000521253 THBS2P35442 1172 aa17.26■□□□□ 0.35
TRIM35-203ENST00000521253 ZNF85Q03923 595 aa17.26■□□□□ 0.35
TRIM35-203ENST00000521253 LIPNQ5VXI9 398 aa17.26■□□□□ 0.35
TRIM35-203ENST00000521253 DCDC5Q6ZRR9 648 aa17.26■□□□□ 0.35
TRIM35-203ENST00000521253 KRT74Q7RTS7 529 aa17.26■□□□□ 0.35
TRIM35-203ENST00000521253 ZDHHC23Q8IYP9 409 aa17.26■□□□□ 0.35
TRIM35-203ENST00000521253 GCSAMQ8N6F7 178 aa17.26■□□□□ 0.35
TRIM35-203ENST00000521253 HPSE2Q8WWQ2 592 aa17.26■□□□□ 0.35
TRIM35-203ENST00000521253 RTL8AQ9BWD3 113 aa17.26■□□□□ 0.35
TRIM35-203ENST00000521253 MMP26Q9NRE1 261 aa17.26■□□□□ 0.35
TRIM35-203ENST00000521253 SLC22A13Q9Y226 551 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms