RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 CFAP65Q6ZU64 1925 aaKnown RBP2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 MTCL1Q9Y4B5 1905 aaKnown RBP2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 TTC21AQ8NDW8 1320 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 IGLV8-61A0A075B6I0 122 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 TRAV8-4A0A0B4J246 113 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 TRAV39A0A0B4J263 110 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 C21orf140B9A014 251 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 CXCR6O00574 342 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 GALR3O60755 368 aaPredicted RBP2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 DHRS3O75911 302 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 GLSO94925 669 aaPredicted RBP2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 SNAPINO95295 136 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 NTN1O95631 604 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 SLC25A27O95847 323 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 IGLV1-44P01699 117 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 P01737 135 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 HLA-AP01891 365 aaKnown RBP2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 TCRBP04435 133 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 TYMSP04818 313 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 CALB1P05937 261 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 HPNP05981 417 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 CHTF8P0CG12 524 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 ERGP11308 486 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 HIST1H1CP16403 213 aaKnown RBP2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 COX7A1P24310 79 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 GTF2H1P32780 548 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 CD70P32970 193 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 RPA3P35244 121 aaPredicted RBP2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 ZNF138P52744 262 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 SLC25A1P53007 311 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 DLX6P56179 175 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 ERVS71-1P61550 626 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 PRR3P79522 188 aaKnown RBP2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 MRPS25P82663 173 aaKnown RBP2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 C2orf54Q08AI8 447 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 NAB1Q13506 487 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 PDK2Q15119 407 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 SNCBQ16143 134 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 GUCA2BQ16661 112 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 ZNF630Q2M218 657 aaPredicted RBP2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 TBC1D28Q2M2D7 210 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 ACSM3Q53FZ2 586 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 PAGE3Q5JUK9 113 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 FBXW9Q5XUX1 488 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 KDM4DQ6B0I6 523 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 PLET1Q6UQ28 207 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 TEX43Q6ZNM6 134 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 NCCRP1Q6ZVX7 275 aaPredicted RBP2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 FAM71E2Q8N5Q1 922 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 OR6N1Q8NGY5 312 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 NT5CQ8TCD5 201 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 FAM151AQ8WW52 585 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 RGP1Q92546 391 aaPredicted RBP2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 HGDQ93099 445 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 DNAJC19Q96DA6 116 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 LYZL4Q96KX0 146 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 KCTD7Q96MP8 289 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 RBP7Q96R05 134 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 HBEGFQ99075 208 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 TAPBPLQ9BX59 468 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 MRPS26Q9BYN8 205 aaKnown RBP2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 MFSD1Q9H3U5 465 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 TMEM27Q9HBJ8 222 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 MYOZ1Q9NP98 299 aaPredicted RBP2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 MRPL40Q9NQ50 206 aaKnown RBP2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 RRAGDQ9NQL2 400 aaPredicted RBP2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 RBFOX1Q9NWB1 397 aaKnown RBP2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 IL17CQ9P0M4 197 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 CD84Q9UIB8 345 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 NDRG2Q9UN36 371 aaKnown RBP2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 SIGLEC9Q9Y336 463 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 ORC6Q9Y5N6 252 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 ALG5Q9Y673 324 aa2.03□□□□□ -2.08
SCARNA11.3-201ENST00000517276 MAP3K5Q99683 1374 aa2.02□□□□□ -2.09
SCARNA11.3-201ENST00000517276 IGHV3OR16-10A0A075B7F0 116 aa2.02□□□□□ -2.09
SCARNA11.3-201ENST00000517276 PRR23AA6NEV1 266 aa2.02□□□□□ -2.09
SCARNA11.3-201ENST00000517276 RBFOX3A6NFN3 312 aa2.02□□□□□ -2.09
SCARNA11.3-201ENST00000517276 CCRL2O00421 344 aa2.02□□□□□ -2.09
SCARNA11.3-201ENST00000517276 AZIN1O14977 448 aa2.02□□□□□ -2.09
SCARNA11.3-201ENST00000517276 PFDN6O15212 129 aa2.02□□□□□ -2.09
SCARNA11.3-201ENST00000517276 LYPLA1O75608 230 aaPredicted RBP2.02□□□□□ -2.09
SCARNA11.3-201ENST00000517276 CTDNEP1O95476 244 aa2.02□□□□□ -2.09
SCARNA11.3-201ENST00000517276 MOSP00540 346 aa2.02□□□□□ -2.09
SCARNA11.3-201ENST00000517276 RLN2P04090 185 aa2.02□□□□□ -2.09
SCARNA11.3-201ENST00000517276 SEMG1P04279 462 aa2.02□□□□□ -2.09
SCARNA11.3-201ENST00000517276 FABP3P05413 133 aa2.02□□□□□ -2.09
SCARNA11.3-201ENST00000517276 BCHEP06276 602 aa2.02□□□□□ -2.09
SCARNA11.3-201ENST00000517276 GIPP09681 153 aaPredicted RBP2.02□□□□□ -2.09
SCARNA11.3-201ENST00000517276 SLC35G6P0C7Q6 338 aa2.02□□□□□ -2.09
SCARNA11.3-201ENST00000517276 CFC1BP0CG36 223 aa2.02□□□□□ -2.09
SCARNA11.3-201ENST00000517276 CFC1P0CG37 223 aa2.02□□□□□ -2.09
SCARNA11.3-201ENST00000517276 IGHV3-43DP0DP04 118 aa2.02□□□□□ -2.09
SCARNA11.3-201ENST00000517276 ICAM2P13598 275 aa2.02□□□□□ -2.09
SCARNA11.3-201ENST00000517276 GDF1P27539 372 aa2.02□□□□□ -2.09
SCARNA11.3-201ENST00000517276 HTR1DP28221 377 aa2.02□□□□□ -2.09
SCARNA11.3-201ENST00000517276 DRD3P35462 400 aa2.02□□□□□ -2.09
SCARNA11.3-201ENST00000517276 SERPINB9P50453 376 aa2.02□□□□□ -2.09
SCARNA11.3-201ENST00000517276 MTPNP58546 118 aa2.02□□□□□ -2.09
SCARNA11.3-201ENST00000517276 NANOS3P60323 173 aaKnown RBP2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms