RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 PLATP00750 562 aa11.36□□□□□ -0.59
TCOF1-215ENST00000515516 HOXA4Q00056 320 aaPredicted RBP11.36□□□□□ -0.59
TCOF1-215ENST00000515516 C11orf91Q3C1V1 193 aa11.36□□□□□ -0.59
TCOF1-215ENST00000515516 METTL11BQ5VVY1 283 aa11.36□□□□□ -0.59
TCOF1-215ENST00000515516 KCTD8Q6ZWB6 473 aa11.36□□□□□ -0.59
TCOF1-215ENST00000515516 PRSS45Q7RTY3 260 aa11.36□□□□□ -0.59
TCOF1-215ENST00000515516 HS3ST5Q8IZT8 346 aa11.36□□□□□ -0.59
TCOF1-215ENST00000515516 GALNT4Q8N4A0 578 aa11.36□□□□□ -0.59
TCOF1-215ENST00000515516 GCSAMQ8N6F7 178 aa11.36□□□□□ -0.59
TCOF1-215ENST00000515516 SGMS2Q8NHU3 365 aa11.36□□□□□ -0.59
TCOF1-215ENST00000515516 DACT3Q96B18 629 aaPredicted RBP11.36□□□□□ -0.59
TCOF1-215ENST00000515516 NRBF2Q96F24 287 aa11.36□□□□□ -0.59
TCOF1-215ENST00000515516 ZNF48Q96MX3 618 aaPredicted RBP11.36□□□□□ -0.59
TCOF1-215ENST00000515516 RTL8AQ9BWD3 113 aa11.36□□□□□ -0.59
TCOF1-215ENST00000515516 PRRG3Q9BZD7 231 aa11.36□□□□□ -0.59
TCOF1-215ENST00000515516 RASSF4Q9H2L5 321 aa11.36□□□□□ -0.59
TCOF1-215ENST00000515516 PAPOLBQ9NRJ5 636 aaKnown RBP11.36□□□□□ -0.59
TCOF1-215ENST00000515516 TVP23BQ9NYZ1 205 aa11.36□□□□□ -0.59
TCOF1-215ENST00000515516 CTSZQ9UBR2 303 aa11.36□□□□□ -0.59
TCOF1-215ENST00000515516 ZNF391Q9UJN7 358 aa11.36□□□□□ -0.59
TCOF1-215ENST00000515516 POMPQ9Y244 141 aa11.36□□□□□ -0.59
TCOF1-215ENST00000515516 RHBDD3Q9Y3P4 386 aa11.36□□□□□ -0.59
TCOF1-215ENST00000515516 MPC1Q9Y5U8 109 aa11.36□□□□□ -0.59
TCOF1-215ENST00000515516 IGHV3OR15-7A0A075B7D8 119 aa11.35□□□□□ -0.59
TCOF1-215ENST00000515516 TCRBV3S1A0A5B6 114 aa11.35□□□□□ -0.59
TCOF1-215ENST00000515516 CLDN34H7C241 214 aa11.35□□□□□ -0.59
TCOF1-215ENST00000515516 LHBP01229 141 aa11.35□□□□□ -0.59
TCOF1-215ENST00000515516 RNASE1P07998 156 aaKnown RBP11.35□□□□□ -0.59
TCOF1-215ENST00000515516 MUC1P15941 1255 aaPredicted RBP11.35□□□□□ -0.59
TCOF1-215ENST00000515516 POU4F2Q12837 409 aa11.35□□□□□ -0.59
TCOF1-215ENST00000515516 APOFQ13790 326 aa11.35□□□□□ -0.59
TCOF1-215ENST00000515516 SLC9A3R2Q15599 337 aa11.35□□□□□ -0.59
TCOF1-215ENST00000515516 TUSC1Q2TAM9 212 aa11.35□□□□□ -0.59
TCOF1-215ENST00000515516 LCN1P1Q5VSP4 162 aa11.35□□□□□ -0.59
TCOF1-215ENST00000515516 TEX36Q5VZQ5 186 aa11.35□□□□□ -0.59
TCOF1-215ENST00000515516 TMEM236Q5W0B7 351 aa11.35□□□□□ -0.59
TCOF1-215ENST00000515516 KCTD18Q6PI47 426 aaPredicted RBP11.35□□□□□ -0.59
TCOF1-215ENST00000515516 BRD3OSQ6XYD6 125 aa11.35□□□□□ -0.59
TCOF1-215ENST00000515516 SLC36A1Q7Z2H8 476 aa11.35□□□□□ -0.59
TCOF1-215ENST00000515516 FAM90A1Q86YD7 464 aa11.35□□□□□ -0.59
TCOF1-215ENST00000515516 PAPD5Q8NDF8 572 aaKnown RBP11.35□□□□□ -0.59
TCOF1-215ENST00000515516 FAM81AQ8TBF8 368 aa11.35□□□□□ -0.59
TCOF1-215ENST00000515516 ST8SIA4Q92187 359 aa11.35□□□□□ -0.59
TCOF1-215ENST00000515516 PIGCQ92535 297 aa11.35□□□□□ -0.59
TCOF1-215ENST00000515516 YIPF3Q9GZM5 350 aa11.35□□□□□ -0.59
TCOF1-215ENST00000515516 SLC25A19Q9HC21 320 aa11.35□□□□□ -0.59
TCOF1-215ENST00000515516 ZNF319Q9P2F9 582 aa11.35□□□□□ -0.59
TCOF1-215ENST00000515516 ACOD1A6NK06 481 aa11.34□□□□□ -0.59
TCOF1-215ENST00000515516 TMEM210A6NLX4 147 aa11.34□□□□□ -0.59
TCOF1-215ENST00000515516 ZNF850A8MQ14 1090 aa11.34□□□□□ -0.59
TCOF1-215ENST00000515516 DVL1O14640 695 aa11.34□□□□□ -0.59
TCOF1-215ENST00000515516 CDIPTO14735 213 aa11.34□□□□□ -0.59
TCOF1-215ENST00000515516 TNFRSF13BO14836 293 aaPredicted RBP11.34□□□□□ -0.59
TCOF1-215ENST00000515516 CFHR2P36980 270 aa11.34□□□□□ -0.59
TCOF1-215ENST00000515516 RASSF2P50749 326 aa11.34□□□□□ -0.59
TCOF1-215ENST00000515516 CRISP1P54107 249 aa11.34□□□□□ -0.59
TCOF1-215ENST00000515516 PSMA6P60900 246 aaKnown RBP11.34□□□□□ -0.59
TCOF1-215ENST00000515516 PRDX4Q13162 271 aa11.34□□□□□ -0.59
TCOF1-215ENST00000515516 PDCD1Q15116 288 aa11.34□□□□□ -0.59
TCOF1-215ENST00000515516 DEGS2Q6QHC5 323 aa11.34□□□□□ -0.59
TCOF1-215ENST00000515516 WDR82Q6UXN9 313 aa11.34□□□□□ -0.59
TCOF1-215ENST00000515516 BTN2A1Q7KYR7 527 aa11.34□□□□□ -0.59
TCOF1-215ENST00000515516 COMMD2Q86X83 199 aa11.34□□□□□ -0.59
TCOF1-215ENST00000515516 C11orf53Q8IXP5 236 aa11.34□□□□□ -0.59
TCOF1-215ENST00000515516 BBS1Q8NFJ9 593 aa11.34□□□□□ -0.59
TCOF1-215ENST00000515516 GATAD2BQ8WXI9 593 aa11.34□□□□□ -0.59
TCOF1-215ENST00000515516 C12orf43Q96C57 262 aaKnown RBP11.34□□□□□ -0.59
TCOF1-215ENST00000515516 SLC7A6OSQ96CW6 309 aaPredicted RBP11.34□□□□□ -0.59
TCOF1-215ENST00000515516 RNF170Q96K19 258 aa11.34□□□□□ -0.59
TCOF1-215ENST00000515516 WDFY2Q96P53 400 aa11.34□□□□□ -0.59
TCOF1-215ENST00000515516 MROQ9BYG7 248 aa11.34□□□□□ -0.59
TCOF1-215ENST00000515516 NOX4Q9NPH5 578 aa11.34□□□□□ -0.59
TCOF1-215ENST00000515516 H2AFY2Q9P0M6 372 aaPredicted RBP11.34□□□□□ -0.59
TCOF1-215ENST00000515516 KAAG1Q9UBP8 84 aa11.34□□□□□ -0.59
TCOF1-215ENST00000515516 DNAJB11Q9UBS4 358 aa11.34□□□□□ -0.59
TCOF1-215ENST00000515516 TMEM14AQ9Y6G1 99 aa11.34□□□□□ -0.59
TCOF1-215ENST00000515516 GSC2O15499 205 aa11.33□□□□□ -0.6
TCOF1-215ENST00000515516 NDUFB3O43676 98 aa11.33□□□□□ -0.6
TCOF1-215ENST00000515516 CST4P01036 141 aa11.33□□□□□ -0.6
TCOF1-215ENST00000515516 CRYBA1P05813 215 aa11.33□□□□□ -0.6
TCOF1-215ENST00000515516 SFTPBP07988 381 aa11.33□□□□□ -0.6
TCOF1-215ENST00000515516 EGR1P18146 543 aa11.33□□□□□ -0.6
TCOF1-215ENST00000515516 ALOX5APP20292 161 aa11.33□□□□□ -0.6
TCOF1-215ENST00000515516 MAP2K3P46734 347 aa11.33□□□□□ -0.6
TCOF1-215ENST00000515516 ESRRGP62508 458 aa11.33□□□□□ -0.6
TCOF1-215ENST00000515516 CSNK2BP67870 215 aa11.33□□□□□ -0.6
TCOF1-215ENST00000515516 IL13RA1P78552 427 aa11.33□□□□□ -0.6
TCOF1-215ENST00000515516 DEFB112Q30KQ8 113 aa11.33□□□□□ -0.6
TCOF1-215ENST00000515516 LRRC10Q5BKY1 277 aa11.33□□□□□ -0.6
TCOF1-215ENST00000515516 C16orf87Q6PH81 154 aa11.33□□□□□ -0.6
TCOF1-215ENST00000515516 SHISA2Q6UWI4 295 aa11.33□□□□□ -0.6
TCOF1-215ENST00000515516 THAP5Q7Z6K1 395 aa11.33□□□□□ -0.6
TCOF1-215ENST00000515516 WDR86Q86TI4 376 aa11.33□□□□□ -0.6
TCOF1-215ENST00000515516 ZDHHC23Q8IYP9 409 aa11.33□□□□□ -0.6
TCOF1-215ENST00000515516 OR8B12Q8NGG6 310 aa11.33□□□□□ -0.6
TCOF1-215ENST00000515516 OR5K1Q8NHB7 308 aa11.33□□□□□ -0.6
TCOF1-215ENST00000515516 ASB17Q8WXJ9 295 aa11.33□□□□□ -0.6
TCOF1-215ENST00000515516 ITFG2Q969R8 447 aa11.33□□□□□ -0.6
TCOF1-215ENST00000515516 ITPKCQ96DU7 683 aa11.33□□□□□ -0.6
TCOF1-215ENST00000515516 C1orf147Q96MC9 270 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms