RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 PIGTQ969N2 578 aa17.91■□□□□ 0.46
LSM6-207ENST00000515311 NOP16Q9Y3C1 178 aaKnown RBP17.91■□□□□ 0.46
LSM6-207ENST00000515311 ARFGEF3Q5TH69 2177 aa17.91■□□□□ 0.46
LSM6-207ENST00000515311 LMX1BO60663 402 aa17.9■□□□□ 0.46
LSM6-207ENST00000515311 TFAP2AP05549 437 aa17.9■□□□□ 0.46
LSM6-207ENST00000515311 CD2P06729 351 aa17.9■□□□□ 0.46
LSM6-207ENST00000515311 ALDH3B1P43353 468 aa17.9■□□□□ 0.46
LSM6-207ENST00000515311 PPOXP50336 477 aa17.9■□□□□ 0.46
LSM6-207ENST00000515311 RPS25P62851 125 aaKnown RBP17.9■□□□□ 0.46
LSM6-207ENST00000515311 TMEM42Q69YG0 159 aa17.9■□□□□ 0.46
LSM6-207ENST00000515311 PARP16Q8N5Y8 322 aa17.9■□□□□ 0.46
LSM6-207ENST00000515311 OR13C5Q8NGS8 318 aa17.9■□□□□ 0.46
LSM6-207ENST00000515311 IGFBPL1Q8WX77 278 aa17.9■□□□□ 0.46
LSM6-207ENST00000515311 PP6455Q8WZ26 134 aa17.9■□□□□ 0.46
LSM6-207ENST00000515311 MS4A5Q9H3V2 200 aa17.9■□□□□ 0.46
LSM6-207ENST00000515311 ABCB9Q9NP78 766 aa17.9■□□□□ 0.46
LSM6-207ENST00000515311 TMEM100Q9NV29 134 aa17.9■□□□□ 0.46
LSM6-207ENST00000515311 ZDHHC8Q9ULC8 765 aa17.9■□□□□ 0.46
LSM6-207ENST00000515311 RHBDD3Q9Y3P4 386 aa17.9■□□□□ 0.46
LSM6-207ENST00000515311 ZSCAN5BA6NJL1 495 aa17.89■□□□□ 0.45
LSM6-207ENST00000515311 ZNF879B4DU55 563 aa17.89■□□□□ 0.45
LSM6-207ENST00000515311 SC5DO75845 299 aa17.89■□□□□ 0.45
LSM6-207ENST00000515311 PRF1P14222 555 aa17.89■□□□□ 0.45
LSM6-207ENST00000515311 ZNF20P17024 532 aa17.89■□□□□ 0.45
LSM6-207ENST00000515311 GALP22466 123 aa17.89■□□□□ 0.45
LSM6-207ENST00000515311 MAPK3P27361 379 aaPredicted RBP17.89■□□□□ 0.45
LSM6-207ENST00000515311 GNALP38405 381 aa17.89■□□□□ 0.45
LSM6-207ENST00000515311 ALDH3B2P48448 385 aa17.89■□□□□ 0.45
LSM6-207ENST00000515311 ZNF81P51508 661 aa17.89■□□□□ 0.45
LSM6-207ENST00000515311 CD200R1LQ6Q8B3 271 aa17.89■□□□□ 0.45
LSM6-207ENST00000515311 Q6ZR03 302 aa17.89■□□□□ 0.45
LSM6-207ENST00000515311 TMEM203Q969S6 136 aa17.89■□□□□ 0.45
LSM6-207ENST00000515311 TMEM106AQ96A25 262 aa17.89■□□□□ 0.45
LSM6-207ENST00000515311 FGGYQ96C11 551 aa17.89■□□□□ 0.45
LSM6-207ENST00000515311 ADAT3Q96EY9 351 aaPredicted RBP17.89■□□□□ 0.45
LSM6-207ENST00000515311 OR14A2Q96R54 314 aa17.89■□□□□ 0.45
LSM6-207ENST00000515311 DIRC2Q96SL1 478 aa17.89■□□□□ 0.45
LSM6-207ENST00000515311 PAPOLGQ9BWT3 736 aaKnown RBP17.89■□□□□ 0.45
LSM6-207ENST00000515311 MSL2Q9HCI7 577 aa17.89■□□□□ 0.45
LSM6-207ENST00000515311 DYNLRB1Q9NP97 96 aa17.89■□□□□ 0.45
LSM6-207ENST00000515311 LAMP3Q9UQV4 416 aa17.89■□□□□ 0.45
LSM6-207ENST00000515311 MPC1Q9Y5U8 109 aa17.89■□□□□ 0.45
LSM6-207ENST00000515311 TRBV5-7A0A0A0MS05 114 aa17.88■□□□□ 0.45
LSM6-207ENST00000515311 GMDSO60547 372 aa17.88■□□□□ 0.45
LSM6-207ENST00000515311 GATBO75879 557 aaKnown RBP17.88■□□□□ 0.45
LSM6-207ENST00000515311 RGS9O75916 674 aaPredicted RBP17.88■□□□□ 0.45
LSM6-207ENST00000515311 HLA-DPB1P04440 258 aa17.88■□□□□ 0.45
LSM6-207ENST00000515311 ADH4P08319 380 aa17.88■□□□□ 0.45
LSM6-207ENST00000515311 CA6P23280 308 aa17.88■□□□□ 0.45
LSM6-207ENST00000515311 TGFBR2P37173 567 aa17.88■□□□□ 0.45
LSM6-207ENST00000515311 SOX2P48431 317 aa17.88■□□□□ 0.45
LSM6-207ENST00000515311 ACSM3Q53FZ2 586 aa17.88■□□□□ 0.45
LSM6-207ENST00000515311 CLVS2Q5SYC1 327 aa17.88■□□□□ 0.45
LSM6-207ENST00000515311 UNQ9370/PRO34162Q6UXP9 181 aa17.88■□□□□ 0.45
LSM6-207ENST00000515311 UTS2BQ765I0 119 aa17.88■□□□□ 0.45
LSM6-207ENST00000515311 SERPINA12Q8IW75 414 aa17.88■□□□□ 0.45
LSM6-207ENST00000515311 OR13F1Q8NGS4 319 aa17.88■□□□□ 0.45
LSM6-207ENST00000515311 UBASH3BQ8TF42 649 aa17.88■□□□□ 0.45
LSM6-207ENST00000515311 TECTBQ96PL2 329 aa17.88■□□□□ 0.45
LSM6-207ENST00000515311 CHST5Q9GZS9 411 aa17.88■□□□□ 0.45
LSM6-207ENST00000515311 PMF1-BGLAPU3KQ54 211 aa17.88■□□□□ 0.45
LSM6-207ENST00000515311 ABCA12Q86UK0 2595 aa17.88■□□□□ 0.45
LSM6-207ENST00000515311 BAHCC1Q9P281 2608 aa17.88■□□□□ 0.45
LSM6-207ENST00000515311 APCP25054 2843 aa17.88■□□□□ 0.45
LSM6-207ENST00000515311 ANKRD61A6NGH8 418 aa17.87■□□□□ 0.45
LSM6-207ENST00000515311 C17orf100A8MU93 164 aa17.87■□□□□ 0.45
LSM6-207ENST00000515311 RAF1P04049 648 aa17.87■□□□□ 0.45
LSM6-207ENST00000515311 NAT2P11245 290 aa17.87■□□□□ 0.45
LSM6-207ENST00000515311 CD36P16671 472 aa17.87■□□□□ 0.45
LSM6-207ENST00000515311 MAGEB1P43366 347 aa17.87■□□□□ 0.45
LSM6-207ENST00000515311 FABP5Q01469 135 aa17.87■□□□□ 0.45
LSM6-207ENST00000515311 PRDX4Q13162 271 aa17.87■□□□□ 0.45
LSM6-207ENST00000515311 PAMR1Q6UXH9 720 aa17.87■□□□□ 0.45
LSM6-207ENST00000515311 OR5D14Q8NGL3 314 aa17.87■□□□□ 0.45
LSM6-207ENST00000515311 PHYHIPQ92561 330 aa17.87■□□□□ 0.45
LSM6-207ENST00000515311 GTF3AQ92664 365 aaKnown RBP17.87■□□□□ 0.45
LSM6-207ENST00000515311 DERL3Q96Q80 235 aa17.87■□□□□ 0.45
LSM6-207ENST00000515311 CCL19Q99731 98 aa17.87■□□□□ 0.45
LSM6-207ENST00000515311 ADAT1Q9BUB4 502 aaKnown RBP17.87■□□□□ 0.45
LSM6-207ENST00000515311 A6NIN4 97 aa17.86■□□□□ 0.45
LSM6-207ENST00000515311 ZNF850A8MQ14 1090 aa17.86■□□□□ 0.45
LSM6-207ENST00000515311 H7C417 338 aa17.86■□□□□ 0.45
LSM6-207ENST00000515311 OVOL3O00110 214 aa17.86■□□□□ 0.45
LSM6-207ENST00000515311 MLNRO43193 412 aa17.86■□□□□ 0.45
LSM6-207ENST00000515311 NRASP01111 189 aa17.86■□□□□ 0.45
LSM6-207ENST00000515311 RPL5P46777 297 aaKnown RBP17.86■□□□□ 0.45
LSM6-207ENST00000515311 KRTAP10-9P60411 292 aa17.86■□□□□ 0.45
LSM6-207ENST00000515311 OR8G1Q15617 311 aa17.86■□□□□ 0.45
LSM6-207ENST00000515311 PCGF3Q3KNV8 242 aa17.86■□□□□ 0.45
LSM6-207ENST00000515311 TMEM91Q6ZNR0 172 aa17.86■□□□□ 0.45
LSM6-207ENST00000515311 ZDHHC23Q8IYP9 409 aa17.86■□□□□ 0.45
LSM6-207ENST00000515311 SPERTQ8NA61 448 aa17.86■□□□□ 0.45
LSM6-207ENST00000515311 PIGCQ92535 297 aa17.86■□□□□ 0.45
LSM6-207ENST00000515311 YIPF6Q96EC8 236 aa17.86■□□□□ 0.45
LSM6-207ENST00000515311 CACNG6Q9BXT2 260 aa17.86■□□□□ 0.45
LSM6-207ENST00000515311 NKIRAS2Q9NYR9 191 aa17.86■□□□□ 0.45
LSM6-207ENST00000515311 EDARQ9UNE0 448 aa17.86■□□□□ 0.45
LSM6-207ENST00000515311 STUB1Q9UNE7 303 aa17.86■□□□□ 0.45
LSM6-207ENST00000515311 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.85■□□□□ 0.45
LSM6-207ENST00000515311 TRDV1A0A1B0GX56 115 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms