RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 hCG_1807616A0A1W2PRN6 198 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 MEGF11A6BM72 1044 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 A6NLC8 198 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 CHST1O43916 411 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 KHDRBS3O75525 346 aaKnown RBP9.37□□□□□ -0.91
RNF4-216ENST00000511859 PF4P02776 101 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 IFNW1P05000 195 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 GRPP07492 148 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 IFI30P13284 250 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 GRK5P34947 590 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 RPL4P36578 427 aaKnown RBP9.37□□□□□ -0.91
RNF4-216ENST00000511859 TGM4P49221 684 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 PRSS12P56730 875 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 HABP2Q14520 560 aaPredicted RBP9.37□□□□□ -0.91
RNF4-216ENST00000511859 KPNB1Q14974 876 aaKnown RBP9.37□□□□□ -0.91
RNF4-216ENST00000511859 KRTAP27-1Q3LI81 207 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 WDR38Q5JTN6 314 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 CASC10Q5T4H9 136 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 ATPAF1Q5TC12 328 aaPredicted RBP9.37□□□□□ -0.91
RNF4-216ENST00000511859 RNF144BQ7Z419 303 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 TSEN54Q7Z6J9 526 aaKnown RBP9.37□□□□□ -0.91
RNF4-216ENST00000511859 OAFQ86UD1 273 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 ZDHHC21Q8IVQ6 265 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 OR5D13Q8NGL4 314 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 CANT1Q8WVQ1 401 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 C17orf50Q8WW18 174 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 C12orf43Q96C57 262 aaKnown RBP9.37□□□□□ -0.91
RNF4-216ENST00000511859 AJUBAQ96IF1 538 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 RAB3IPQ96QF0 476 aaPredicted RBP9.37□□□□□ -0.91
RNF4-216ENST00000511859 KRTAP17-1Q9BYP8 105 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 PRSS22Q9GZN4 317 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 RNPEPL1Q9HAU8 725 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 C14orf119Q9NWQ9 140 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 MRPL15Q9P015 296 aaKnown RBP9.37□□□□□ -0.91
RNF4-216ENST00000511859 ZMAT5Q9UDW3 170 aaKnown RBP9.37□□□□□ -0.91
RNF4-216ENST00000511859 COA3Q9Y2R0 106 aaPredicted RBP9.37□□□□□ -0.91
RNF4-216ENST00000511859 POLR1DQ9Y2S0 133 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 IGHV3OR15-7A0A075B7D8 119 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 TRAV27A0A087WT01 109 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.37□□□□□ -0.91
RNF4-216ENST00000511859 A0A1B0GW55 424 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 CD300LBA8K4G0 201 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 F5H5K5 113 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 SLC16A7O60669 478 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 CLIC3O95833 236 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 LCATP04180 440 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 CD14P08571 375 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 ACSM4P0C7M7 580 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 DUX4L2P0CJ85 424 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 DUX4L3P0CJ86 424 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 DUX4L4P0CJ87 422 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 DUX4L5P0CJ88 424 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 DUX4L6P0CJ89 424 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 DUX4L7P0CJ90 424 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 SLC9A3P48764 834 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 ST3GAL3Q11203 375 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 FHL1Q13642 323 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 DUX4L9Q6RFH8 374 aaPredicted RBP9.37□□□□□ -0.91
RNF4-216ENST00000511859 MRPL21Q7Z2W9 205 aaKnown RBP9.37□□□□□ -0.91
RNF4-216ENST00000511859 ADGRG5Q8IZF4 528 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 PIFOQ8TCI5 191 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 C7orf34Q96L11 122 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 DNTTIP1Q9H147 329 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 NMNAT1Q9HAN9 279 aaPredicted RBP9.37□□□□□ -0.91
RNF4-216ENST00000511859 DUX4Q9UBX2 424 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 ENPP4Q9Y6X5 453 aa9.37□□□□□ -0.91
RNF4-216ENST00000511859 CSMD3Q7Z407 3707 aa9.36□□□□□ -0.91
RNF4-216ENST00000511859 TCRBV3S1A0A5B6 114 aa9.36□□□□□ -0.91
RNF4-216ENST00000511859 DHRS12A0PJE2 317 aa9.36□□□□□ -0.91
RNF4-216ENST00000511859 AQP12BA6NM10 295 aa9.36□□□□□ -0.91
RNF4-216ENST00000511859 GLCEO94923 617 aa9.36□□□□□ -0.91
RNF4-216ENST00000511859 SEMG1P04279 462 aa9.36□□□□□ -0.91
RNF4-216ENST00000511859 FABP3P05413 133 aa9.36□□□□□ -0.91
RNF4-216ENST00000511859 LMO1P25800 156 aa9.36□□□□□ -0.91
RNF4-216ENST00000511859 HOXD3P31249 432 aaPredicted RBP9.36□□□□□ -0.91
RNF4-216ENST00000511859 IFNA8P32881 189 aa9.36□□□□□ -0.91
RNF4-216ENST00000511859 BMXP51813 675 aa9.36□□□□□ -0.91
RNF4-216ENST00000511859 IKZF1Q13422 519 aa9.36□□□□□ -0.91
RNF4-216ENST00000511859 CNN3Q15417 329 aaKnown RBP9.36□□□□□ -0.91
RNF4-216ENST00000511859 PCK2Q16822 640 aa9.36□□□□□ -0.91
RNF4-216ENST00000511859 FAM98BQ52LJ0 330 aaKnown RBP9.36□□□□□ -0.91
RNF4-216ENST00000511859 MESTQ5EB52 335 aa9.36□□□□□ -0.91
RNF4-216ENST00000511859 OTPQ5XKR4 325 aa9.36□□□□□ -0.91
RNF4-216ENST00000511859 AQP12AQ8IXF9 295 aa9.36□□□□□ -0.91
RNF4-216ENST00000511859 FAM216BQ8N7L0 139 aa9.36□□□□□ -0.91
RNF4-216ENST00000511859 OR5AU1Q8NGC0 362 aa9.36□□□□□ -0.91
RNF4-216ENST00000511859 OR9Q1Q8NGQ5 310 aa9.36□□□□□ -0.91
RNF4-216ENST00000511859 H1FXQ92522 213 aaKnown RBP9.36□□□□□ -0.91
RNF4-216ENST00000511859 Q96M85 177 aa9.36□□□□□ -0.91
RNF4-216ENST00000511859 FNDC11Q9BVV2 318 aa9.36□□□□□ -0.91
RNF4-216ENST00000511859 SYT4Q9H2B2 425 aa9.36□□□□□ -0.91
RNF4-216ENST00000511859 RERGLQ9H628 205 aa9.36□□□□□ -0.91
RNF4-216ENST00000511859 NDUFAF4Q9P032 175 aa9.36□□□□□ -0.91
RNF4-216ENST00000511859 A4GNTQ9UNA3 340 aa9.36□□□□□ -0.91
RNF4-216ENST00000511859 ADAM18Q9Y3Q7 739 aa9.36□□□□□ -0.91
RNF4-216ENST00000511859 FAM32AQ9Y421 112 aaKnown RBP9.36□□□□□ -0.91
RNF4-216ENST00000511859 LHFPL6Q9Y693 200 aa9.36□□□□□ -0.91
RNF4-216ENST00000511859 TRBV23-1A0A0A0MS06 115 aa9.35□□□□□ -0.91
RNF4-216ENST00000511859 A0A1W2PQ09 198 aa9.35□□□□□ -0.91
RNF4-216ENST00000511859 A0A1W2PRX2 142 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms