RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 TET2Q6N021 2002 aaPredicted RBP13□□□□□ -0.33
RAB40C-202ENST00000509637 A0A1B0GVI7 797 aa13□□□□□ -0.33
RAB40C-202ENST00000509637 NPFFO15130 113 aa13□□□□□ -0.33
RAB40C-202ENST00000509637 ARPC2O15144 300 aa13□□□□□ -0.33
RAB40C-202ENST00000509637 CCDC22O60826 627 aa13□□□□□ -0.33
RAB40C-202ENST00000509637 SPI1P17947 270 aa13□□□□□ -0.33
RAB40C-202ENST00000509637 ACKR3P25106 362 aa13□□□□□ -0.33
RAB40C-202ENST00000509637 ENTPD1P49961 510 aa13□□□□□ -0.33
RAB40C-202ENST00000509637 GMFBP60983 142 aa13□□□□□ -0.33
RAB40C-202ENST00000509637 MXRA7P84157 204 aa13□□□□□ -0.33
RAB40C-202ENST00000509637 IKZF1Q13422 519 aa13□□□□□ -0.33
RAB40C-202ENST00000509637 ATPAF1Q5TC12 328 aaPredicted RBP13□□□□□ -0.33
RAB40C-202ENST00000509637 CRIP3Q6Q6R5 217 aa13□□□□□ -0.33
RAB40C-202ENST00000509637 GDPGP1Q6ZNW5 385 aa13□□□□□ -0.33
RAB40C-202ENST00000509637 DPY19L4Q7Z388 723 aa13□□□□□ -0.33
RAB40C-202ENST00000509637 LINC00471Q8N535 108 aa13□□□□□ -0.33
RAB40C-202ENST00000509637 OR2T4Q8NH00 348 aa13□□□□□ -0.33
RAB40C-202ENST00000509637 RORBQ92753 470 aa13□□□□□ -0.33
RAB40C-202ENST00000509637 RPL3LQ92901 407 aaKnown RBP13□□□□□ -0.33
RAB40C-202ENST00000509637 UBE2FQ969M7 185 aa13□□□□□ -0.33
RAB40C-202ENST00000509637 ITPKCQ96DU7 683 aa13□□□□□ -0.33
RAB40C-202ENST00000509637 LYZL4Q96KX0 146 aa13□□□□□ -0.33
RAB40C-202ENST00000509637 GAFA1Q96PS6 74 aa13□□□□□ -0.33
RAB40C-202ENST00000509637 ELL3Q9HB65 397 aaPredicted RBP13□□□□□ -0.33
RAB40C-202ENST00000509637 SPAG4Q9NPE6 437 aa13□□□□□ -0.33
RAB40C-202ENST00000509637 IL1RAPQ9NPH3 570 aa13□□□□□ -0.33
RAB40C-202ENST00000509637 KRCC1Q9NPI7 259 aaPredicted RBP13□□□□□ -0.33
RAB40C-202ENST00000509637 FOXJ3Q9UPW0 622 aa13□□□□□ -0.33
RAB40C-202ENST00000509637 NOP16Q9Y3C1 178 aaKnown RBP13□□□□□ -0.33
RAB40C-202ENST00000509637 TBX1O43435 398 aa12.99□□□□□ -0.33
RAB40C-202ENST00000509637 HSD17B1P14061 328 aa12.99□□□□□ -0.33
RAB40C-202ENST00000509637 MUC1P15941 1255 aaPredicted RBP12.99□□□□□ -0.33
RAB40C-202ENST00000509637 SAA4P35542 130 aa12.99□□□□□ -0.33
RAB40C-202ENST00000509637 CX3CR1P49238 355 aa12.99□□□□□ -0.33
RAB40C-202ENST00000509637 GSK3AP49840 483 aa12.99□□□□□ -0.33
RAB40C-202ENST00000509637 SMIM11AP58511 58 aa12.99□□□□□ -0.33
RAB40C-202ENST00000509637 MICBQ29980 383 aa12.99□□□□□ -0.33
RAB40C-202ENST00000509637 C11orf91Q3C1V1 193 aa12.99□□□□□ -0.33
RAB40C-202ENST00000509637 ZNF788Q6ZQV5 615 aa12.99□□□□□ -0.33
RAB40C-202ENST00000509637 FAM57BQ71RH2 274 aa12.99□□□□□ -0.33
RAB40C-202ENST00000509637 REEP6Q96HR9 211 aa12.99□□□□□ -0.33
RAB40C-202ENST00000509637 ABHD6Q9BV23 337 aa12.99□□□□□ -0.33
RAB40C-202ENST00000509637 PPA2Q9H2U2 334 aa12.99□□□□□ -0.33
RAB40C-202ENST00000509637 DPAGT1Q9H3H5 408 aa12.99□□□□□ -0.33
RAB40C-202ENST00000509637 TRIM36Q9NQ86 728 aa12.99□□□□□ -0.33
RAB40C-202ENST00000509637 C14orf119Q9NWQ9 140 aa12.99□□□□□ -0.33
RAB40C-202ENST00000509637 KIF17Q9P2E2 1029 aa12.99□□□□□ -0.33
RAB40C-202ENST00000509637 NOTCH3Q9UM47 2321 aa12.99□□□□□ -0.33
RAB40C-202ENST00000509637 NDUFAB1O14561 156 aa12.98□□□□□ -0.33
RAB40C-202ENST00000509637 XRCC2O43543 280 aa12.98□□□□□ -0.33
RAB40C-202ENST00000509637 FABP3P05413 133 aa12.98□□□□□ -0.33
RAB40C-202ENST00000509637 DCTDP32321 178 aa12.98□□□□□ -0.33
RAB40C-202ENST00000509637 DDOSTP39656 456 aa12.98□□□□□ -0.33
RAB40C-202ENST00000509637 SLC25A1P53007 311 aa12.98□□□□□ -0.33
RAB40C-202ENST00000509637 ZNF121P58317 390 aaPredicted RBP12.98□□□□□ -0.33
RAB40C-202ENST00000509637 ERVFRD-1P60508 538 aa12.98□□□□□ -0.33
RAB40C-202ENST00000509637 DMRTC1Q5HYR2 192 aa12.98□□□□□ -0.33
RAB40C-202ENST00000509637 SAMD5Q5TGI4 173 aa12.98□□□□□ -0.33
RAB40C-202ENST00000509637 DHRS7BQ6IAN0 325 aaPredicted RBP12.98□□□□□ -0.33
RAB40C-202ENST00000509637 Q6ZPA2 131 aa12.98□□□□□ -0.33
RAB40C-202ENST00000509637 C1orf122Q6ZSJ8 110 aa12.98□□□□□ -0.33
RAB40C-202ENST00000509637 RASSF6Q6ZTQ3 369 aa12.98□□□□□ -0.33
RAB40C-202ENST00000509637 C11orf44Q8N8P7 122 aa12.98□□□□□ -0.33
RAB40C-202ENST00000509637 OR8S1Q8NH09 359 aa12.98□□□□□ -0.33
RAB40C-202ENST00000509637 ANGPTL6Q8NI99 470 aa12.98□□□□□ -0.33
RAB40C-202ENST00000509637 HPSE2Q8WWQ2 592 aa12.98□□□□□ -0.33
RAB40C-202ENST00000509637 RAB3IPQ96QF0 476 aaPredicted RBP12.98□□□□□ -0.33
RAB40C-202ENST00000509637 ELAC2Q9BQ52 826 aaKnown RBP12.98□□□□□ -0.33
RAB40C-202ENST00000509637 TSSK6Q9BXA6 273 aa12.98□□□□□ -0.33
RAB40C-202ENST00000509637 SP140LQ9H930 580 aa12.98□□□□□ -0.33
RAB40C-202ENST00000509637 ARMC1Q9NVT9 282 aa12.98□□□□□ -0.33
RAB40C-202ENST00000509637 HAO2Q9NYQ3 351 aa12.98□□□□□ -0.33
RAB40C-202ENST00000509637 TAS2R1Q9NYW7 299 aa12.98□□□□□ -0.33
RAB40C-202ENST00000509637 DNAJC27Q9NZQ0 273 aa12.98□□□□□ -0.33
RAB40C-202ENST00000509637 ZNF391Q9UJN7 358 aa12.98□□□□□ -0.33
RAB40C-202ENST00000509637 FAM96BQ9Y3D0 163 aa12.98□□□□□ -0.33
RAB40C-202ENST00000509637 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.97□□□□□ -0.33
RAB40C-202ENST00000509637 ANKRD30BLA7E2S9 258 aa12.97□□□□□ -0.33
RAB40C-202ENST00000509637 ZNF878C9JN71 531 aa12.97□□□□□ -0.33
RAB40C-202ENST00000509637 AKR7A2O43488 359 aa12.97□□□□□ -0.33
RAB40C-202ENST00000509637 RHBDL1O75783 438 aa12.97□□□□□ -0.33
RAB40C-202ENST00000509637 SOX14O95416 240 aa12.97□□□□□ -0.33
RAB40C-202ENST00000509637 FBP1P09467 338 aa12.97□□□□□ -0.33
RAB40C-202ENST00000509637 FMO3P31513 532 aa12.97□□□□□ -0.33
RAB40C-202ENST00000509637 EFNB2P52799 333 aa12.97□□□□□ -0.33
RAB40C-202ENST00000509637 EIF2B1Q14232 305 aaKnown RBP12.97□□□□□ -0.33
RAB40C-202ENST00000509637 KPRPQ5T749 579 aaPredicted RBP12.97□□□□□ -0.33
RAB40C-202ENST00000509637 C11orf42Q8N5U0 333 aa12.97□□□□□ -0.33
RAB40C-202ENST00000509637 PIFOQ8TCI5 191 aa12.97□□□□□ -0.33
RAB40C-202ENST00000509637 RNF133Q8WVZ7 376 aa12.97□□□□□ -0.33
RAB40C-202ENST00000509637 CDRT15Q96T59 188 aa12.97□□□□□ -0.33
RAB40C-202ENST00000509637 BRD7Q9NPI1 651 aa12.97□□□□□ -0.33
RAB40C-202ENST00000509637 FBLN5Q9UBX5 448 aa12.97□□□□□ -0.33
RAB40C-202ENST00000509637 KLHDC2Q9Y2U9 406 aa12.97□□□□□ -0.33
RAB40C-202ENST00000509637 MAB21L2Q9Y586 359 aa12.97□□□□□ -0.33
RAB40C-202ENST00000509637 FAM183AA6NL82 134 aa12.96□□□□□ -0.33
RAB40C-202ENST00000509637 NDUFB3O43676 98 aa12.96□□□□□ -0.33
RAB40C-202ENST00000509637 ANXA2P07355 339 aaKnown RBP12.96□□□□□ -0.33
RAB40C-202ENST00000509637 CSF1P09603 554 aa12.96□□□□□ -0.33
RAB40C-202ENST00000509637 ATP6V1B2P21281 511 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms