RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.05□□□□□ -0.32
CXCL1-202ENST00000509101 NDUFAF4Q9P032 175 aa13.05□□□□□ -0.32
CXCL1-202ENST00000509101 AP3M1Q9Y2T2 418 aa13.05□□□□□ -0.32
CXCL1-202ENST00000509101 NKX6-3A6NJ46 265 aa13.04□□□□□ -0.32
CXCL1-202ENST00000509101 NME4O00746 187 aa13.04□□□□□ -0.32
CXCL1-202ENST00000509101 XRCC2O43543 280 aa13.04□□□□□ -0.32
CXCL1-202ENST00000509101 TFF1P04155 84 aa13.04□□□□□ -0.32
CXCL1-202ENST00000509101 SLC7A2P52569 658 aa13.04□□□□□ -0.32
CXCL1-202ENST00000509101 ACSM1Q08AH1 577 aa13.04□□□□□ -0.32
CXCL1-202ENST00000509101 SLC35F1Q5T1Q4 408 aa13.04□□□□□ -0.32
CXCL1-202ENST00000509101 NCR3LG1Q68D85 454 aa13.04□□□□□ -0.32
CXCL1-202ENST00000509101 LYPD4Q6UWN0 246 aa13.04□□□□□ -0.32
CXCL1-202ENST00000509101 ZDHHC21Q8IVQ6 265 aa13.04□□□□□ -0.32
CXCL1-202ENST00000509101 OR4S1Q8NGB4 309 aa13.04□□□□□ -0.32
CXCL1-202ENST00000509101 OR51G2Q8NGK0 314 aa13.04□□□□□ -0.32
CXCL1-202ENST00000509101 OR4C15Q8NGM1 316 aa13.04□□□□□ -0.32
CXCL1-202ENST00000509101 PHF21AQ96BD5 680 aa13.04□□□□□ -0.32
CXCL1-202ENST00000509101 C12orf43Q96C57 262 aaKnown RBP13.04□□□□□ -0.32
CXCL1-202ENST00000509101 ELAC2Q9BQ52 826 aaKnown RBP13.04□□□□□ -0.32
CXCL1-202ENST00000509101 RANBP3Q9H6Z4 567 aaPredicted RBP13.04□□□□□ -0.32
CXCL1-202ENST00000509101 SNTG1Q9NSN8 517 aa13.04□□□□□ -0.32
CXCL1-202ENST00000509101 MAB21L2Q9Y586 359 aa13.04□□□□□ -0.32
CXCL1-202ENST00000509101 CAPN7Q9Y6W3 813 aa13.04□□□□□ -0.32
CXCL1-202ENST00000509101 A0A1W2PQ09 198 aa13.03□□□□□ -0.32
CXCL1-202ENST00000509101 TBX1O43435 398 aa13.03□□□□□ -0.32
CXCL1-202ENST00000509101 RHCEP18577 417 aa13.03□□□□□ -0.32
CXCL1-202ENST00000509101 PAX6P26367 422 aa13.03□□□□□ -0.32
CXCL1-202ENST00000509101 NAA10P41227 235 aaPredicted RBP13.03□□□□□ -0.32
CXCL1-202ENST00000509101 TGM4P49221 684 aa13.03□□□□□ -0.32
CXCL1-202ENST00000509101 GSK3BP49841 420 aa13.03□□□□□ -0.32
CXCL1-202ENST00000509101 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.03□□□□□ -0.32
CXCL1-202ENST00000509101 LRRC75BQ2VPJ9 315 aa13.03□□□□□ -0.32
CXCL1-202ENST00000509101 DCXRQ7Z4W1 244 aa13.03□□□□□ -0.32
CXCL1-202ENST00000509101 PROKR2Q8NFJ6 384 aa13.03□□□□□ -0.32
CXCL1-202ENST00000509101 OR9Q1Q8NGQ5 310 aa13.03□□□□□ -0.32
CXCL1-202ENST00000509101 FUZQ9BT04 418 aa13.03□□□□□ -0.32
CXCL1-202ENST00000509101 MMP28Q9H239 520 aa13.03□□□□□ -0.32
CXCL1-202ENST00000509101 PPP1R3EQ9H7J1 279 aa13.03□□□□□ -0.32
CXCL1-202ENST00000509101 METTL8Q9H825 291 aaKnown RBP13.03□□□□□ -0.32
CXCL1-202ENST00000509101 ZNF391Q9UJN7 358 aa13.03□□□□□ -0.32
CXCL1-202ENST00000509101 M0R1W7 72 aa13.02□□□□□ -0.33
CXCL1-202ENST00000509101 DYNC1I1O14576 645 aa13.02□□□□□ -0.33
CXCL1-202ENST00000509101 CDIPTO14735 213 aa13.02□□□□□ -0.33
CXCL1-202ENST00000509101 FBXO24O75426 580 aa13.02□□□□□ -0.33
CXCL1-202ENST00000509101 TIPRLO75663 272 aa13.02□□□□□ -0.33
CXCL1-202ENST00000509101 NDUFB7P17568 137 aa13.02□□□□□ -0.33
CXCL1-202ENST00000509101 TAF13Q15543 124 aa13.02□□□□□ -0.33
CXCL1-202ENST00000509101 VAX1Q5SQQ9 334 aa13.02□□□□□ -0.33
CXCL1-202ENST00000509101 ZBTB37Q5TC79 503 aa13.02□□□□□ -0.33
CXCL1-202ENST00000509101 HCP5Q6MZN7 132 aa13.02□□□□□ -0.33
CXCL1-202ENST00000509101 PGBD2Q6P3X8 592 aa13.02□□□□□ -0.33
CXCL1-202ENST00000509101 SLC16A9Q7RTY1 509 aa13.02□□□□□ -0.33
CXCL1-202ENST00000509101 CYB561A3Q8NBI2 242 aa13.02□□□□□ -0.33
CXCL1-202ENST00000509101 OR51L1Q8NGJ5 315 aa13.02□□□□□ -0.33
CXCL1-202ENST00000509101 SPSB4Q96A44 273 aa13.02□□□□□ -0.33
CXCL1-202ENST00000509101 SLAMF6Q96DU3 332 aa13.02□□□□□ -0.33
CXCL1-202ENST00000509101 DHRS1Q96LJ7 313 aa13.02□□□□□ -0.33
CXCL1-202ENST00000509101 GAFA1Q96PS6 74 aa13.02□□□□□ -0.33
CXCL1-202ENST00000509101 KCNJ15Q99712 375 aa13.02□□□□□ -0.33
CXCL1-202ENST00000509101 NKX3-1Q99801 234 aaPredicted RBP13.02□□□□□ -0.33
CXCL1-202ENST00000509101 FAM107BQ9H098 131 aa13.02□□□□□ -0.33
CXCL1-202ENST00000509101 FAM234AQ9H0X4 552 aa13.02□□□□□ -0.33
CXCL1-202ENST00000509101 WDR13Q9H1Z4 485 aa13.02□□□□□ -0.33
CXCL1-202ENST00000509101 ELL3Q9HB65 397 aaPredicted RBP13.02□□□□□ -0.33
CXCL1-202ENST00000509101 RAB18Q9NP72 206 aa13.02□□□□□ -0.33
CXCL1-202ENST00000509101 CENPMQ9NSP4 180 aa13.02□□□□□ -0.33
CXCL1-202ENST00000509101 HAO2Q9NYQ3 351 aa13.02□□□□□ -0.33
CXCL1-202ENST00000509101 SLC25A10Q9UBX3 287 aaPredicted RBP13.02□□□□□ -0.33
CXCL1-202ENST00000509101 COMMD3-BMI1R4GMX3 469 aa13.02□□□□□ -0.33
CXCL1-202ENST00000509101 ANGPTL7O43827 346 aa13.01□□□□□ -0.33
CXCL1-202ENST00000509101 CHST1O43916 411 aa13.01□□□□□ -0.33
CXCL1-202ENST00000509101 SPARCP09486 303 aa13.01□□□□□ -0.33
CXCL1-202ENST00000509101 CD28P10747 220 aa13.01□□□□□ -0.33
CXCL1-202ENST00000509101 DDOSTP39656 456 aa13.01□□□□□ -0.33
CXCL1-202ENST00000509101 FAM3AP98173 230 aa13.01□□□□□ -0.33
CXCL1-202ENST00000509101 KRT72Q14CN4 511 aa13.01□□□□□ -0.33
CXCL1-202ENST00000509101 DGUOKQ16854 277 aa13.01□□□□□ -0.33
CXCL1-202ENST00000509101 TIGD6Q17RP2 521 aa13.01□□□□□ -0.33
CXCL1-202ENST00000509101 ATPAF1Q5TC12 328 aaPredicted RBP13.01□□□□□ -0.33
CXCL1-202ENST00000509101 CRIP3Q6Q6R5 217 aa13.01□□□□□ -0.33
CXCL1-202ENST00000509101 FAM86B1Q8N7N1 296 aa13.01□□□□□ -0.33
CXCL1-202ENST00000509101 ZNRF4Q8WWF5 429 aa13.01□□□□□ -0.33
CXCL1-202ENST00000509101 R3HDM4Q96D70 268 aa13.01□□□□□ -0.33
CXCL1-202ENST00000509101 REEP6Q96HR9 211 aa13.01□□□□□ -0.33
CXCL1-202ENST00000509101 C7orf34Q96L11 122 aa13.01□□□□□ -0.33
CXCL1-202ENST00000509101 KCTD14Q9BQ13 255 aaPredicted RBP13.01□□□□□ -0.33
CXCL1-202ENST00000509101 PAPOLGQ9BWT3 736 aaKnown RBP13.01□□□□□ -0.33
CXCL1-202ENST00000509101 NPFFR1Q9GZQ6 430 aa13.01□□□□□ -0.33
CXCL1-202ENST00000509101 SF3B6Q9Y3B4 125 aaKnown RBP13.01□□□□□ -0.33
CXCL1-202ENST00000509101 TENM3Q9P273 2699 aa13.01□□□□□ -0.33
CXCL1-202ENST00000509101 ZNF878C9JN71 531 aa13□□□□□ -0.33
CXCL1-202ENST00000509101 H0YAE9 185 aa13□□□□□ -0.33
CXCL1-202ENST00000509101 IDH3BO43837 385 aa13□□□□□ -0.33
CXCL1-202ENST00000509101 ANXA2P07355 339 aaKnown RBP13□□□□□ -0.33
CXCL1-202ENST00000509101 POU1F1P28069 291 aa13□□□□□ -0.33
CXCL1-202ENST00000509101 GNALP38405 381 aa13□□□□□ -0.33
CXCL1-202ENST00000509101 CX3CR1P49238 355 aa13□□□□□ -0.33
CXCL1-202ENST00000509101 BMXP51813 675 aa13□□□□□ -0.33
CXCL1-202ENST00000509101 GNGT1P63211 74 aa13□□□□□ -0.33
CXCL1-202ENST00000509101 SPIBQ01892 262 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms