RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 CRIP3Q6Q6R5 217 aa11.31□□□□□ -0.6
DDR1-260ENST00000507533 OR51G2Q8NGK0 314 aa11.31□□□□□ -0.6
DDR1-260ENST00000507533 GNPDA2Q8TDQ7 276 aa11.31□□□□□ -0.6
DDR1-260ENST00000507533 RORBQ92753 470 aa11.31□□□□□ -0.6
DDR1-260ENST00000507533 TNFRSF14Q92956 283 aa11.31□□□□□ -0.6
DDR1-260ENST00000507533 SLCO4A1Q96BD0 722 aa11.31□□□□□ -0.6
DDR1-260ENST00000507533 DUS3LQ96G46 650 aaKnown RBP11.31□□□□□ -0.6
DDR1-260ENST00000507533 DMRTB1Q96MA1 342 aa11.31□□□□□ -0.6
DDR1-260ENST00000507533 NKX3-1Q99801 234 aaPredicted RBP11.31□□□□□ -0.6
DDR1-260ENST00000507533 NDEL1Q9GZM8 345 aa11.31□□□□□ -0.6
DDR1-260ENST00000507533 RERGLQ9H628 205 aa11.31□□□□□ -0.6
DDR1-260ENST00000507533 ATPIF1Q9UII2 106 aa11.31□□□□□ -0.6
DDR1-260ENST00000507533 SIGLEC7Q9Y286 467 aa11.31□□□□□ -0.6
DDR1-260ENST00000507533 IGHV3OR15-7A0A075B7D8 119 aa11.3□□□□□ -0.6
DDR1-260ENST00000507533 A0A1B0GW55 424 aa11.3□□□□□ -0.6
DDR1-260ENST00000507533 E9PQ18 207 aa11.3□□□□□ -0.6
DDR1-260ENST00000507533 GNGT2O14610 69 aa11.3□□□□□ -0.6
DDR1-260ENST00000507533 DUX4L2P0CJ85 424 aa11.3□□□□□ -0.6
DDR1-260ENST00000507533 DUX4L3P0CJ86 424 aa11.3□□□□□ -0.6
DDR1-260ENST00000507533 DUX4L4P0CJ87 422 aa11.3□□□□□ -0.6
DDR1-260ENST00000507533 DUX4L5P0CJ88 424 aa11.3□□□□□ -0.6
DDR1-260ENST00000507533 DUX4L6P0CJ89 424 aa11.3□□□□□ -0.6
DDR1-260ENST00000507533 DUX4L7P0CJ90 424 aa11.3□□□□□ -0.6
DDR1-260ENST00000507533 GSSP48637 474 aa11.3□□□□□ -0.6
DDR1-260ENST00000507533 LSM6P62312 80 aaKnown RBP11.3□□□□□ -0.6
DDR1-260ENST00000507533 GK2Q14410 553 aaPredicted RBP11.3□□□□□ -0.6
DDR1-260ENST00000507533 HABP2Q14520 560 aaPredicted RBP11.3□□□□□ -0.6
DDR1-260ENST00000507533 MICAQ29983 383 aa11.3□□□□□ -0.6
DDR1-260ENST00000507533 DUX4L9Q6RFH8 374 aaPredicted RBP11.3□□□□□ -0.6
DDR1-260ENST00000507533 GCSAMQ8N6F7 178 aa11.3□□□□□ -0.6
DDR1-260ENST00000507533 PLPP7Q8NBV4 271 aa11.3□□□□□ -0.6
DDR1-260ENST00000507533 C17orf50Q8WW18 174 aa11.3□□□□□ -0.6
DDR1-260ENST00000507533 SPRYD4Q8WW59 207 aaPredicted RBP11.3□□□□□ -0.6
DDR1-260ENST00000507533 CCL13Q99616 98 aa11.3□□□□□ -0.6
DDR1-260ENST00000507533 SERTAD4Q9NUC0 356 aa11.3□□□□□ -0.6
DDR1-260ENST00000507533 DNAJB9Q9UBS3 223 aa11.3□□□□□ -0.6
DDR1-260ENST00000507533 DUX4Q9UBX2 424 aa11.3□□□□□ -0.6
DDR1-260ENST00000507533 NOP16Q9Y3C1 178 aaKnown RBP11.3□□□□□ -0.6
DDR1-260ENST00000507533 U3KQV3 271 aa11.3□□□□□ -0.6
DDR1-260ENST00000507533 DNAH7Q8WXX0 4024 aa11.29□□□□□ -0.6
DDR1-260ENST00000507533 TEX13CA0A0J9YWL9 993 aa11.29□□□□□ -0.6
DDR1-260ENST00000507533 CHST1O43916 411 aa11.29□□□□□ -0.6
DDR1-260ENST00000507533 NDUFB2O95178 105 aa11.29□□□□□ -0.6
DDR1-260ENST00000507533 PTBP3O95758 552 aaKnown RBP11.29□□□□□ -0.6
DDR1-260ENST00000507533 CD14P08571 375 aa11.29□□□□□ -0.6
DDR1-260ENST00000507533 CTLA4P16410 223 aa11.29□□□□□ -0.6
DDR1-260ENST00000507533 FAHP16930 419 aa11.29□□□□□ -0.6
DDR1-260ENST00000507533 RPL4P36578 427 aaKnown RBP11.29□□□□□ -0.6
DDR1-260ENST00000507533 ELF3P78545 371 aaPredicted RBP11.29□□□□□ -0.6
DDR1-260ENST00000507533 TSPAN31Q12999 210 aa11.29□□□□□ -0.6
DDR1-260ENST00000507533 LRRC75BQ2VPJ9 315 aa11.29□□□□□ -0.6
DDR1-260ENST00000507533 TEX36Q5VZQ5 186 aa11.29□□□□□ -0.6
DDR1-260ENST00000507533 ZNF770Q6IQ21 691 aaPredicted RBP11.29□□□□□ -0.6
DDR1-260ENST00000507533 ZNF826PQ6ZT77 177 aa11.29□□□□□ -0.6
DDR1-260ENST00000507533 OR9Q2Q8NGE9 314 aa11.29□□□□□ -0.6
DDR1-260ENST00000507533 COQ7Q99807 217 aa11.29□□□□□ -0.6
DDR1-260ENST00000507533 ADAT1Q9BUB4 502 aaKnown RBP11.29□□□□□ -0.6
DDR1-260ENST00000507533 SLC22A4Q9H015 551 aa11.29□□□□□ -0.6
DDR1-260ENST00000507533 ZNF702PQ9H963 129 aa11.29□□□□□ -0.6
DDR1-260ENST00000507533 ARMC1Q9NVT9 282 aa11.29□□□□□ -0.6
DDR1-260ENST00000507533 GRHPRQ9UBQ7 328 aa11.29□□□□□ -0.6
DDR1-260ENST00000507533 PCDHGB5Q9Y5G0 923 aa11.29□□□□□ -0.6
DDR1-260ENST00000507533 U3KQK5 164 aa11.29□□□□□ -0.6
DDR1-260ENST00000507533 TENM2Q9NT68 2774 aa11.28□□□□□ -0.6
DDR1-260ENST00000507533 hCG_1807616A0A1W2PRN6 198 aa11.28□□□□□ -0.6
DDR1-260ENST00000507533 A0A1W2PRX2 142 aa11.28□□□□□ -0.6
DDR1-260ENST00000507533 MEGF11A6BM72 1044 aa11.28□□□□□ -0.6
DDR1-260ENST00000507533 A6NLC8 198 aa11.28□□□□□ -0.6
DDR1-260ENST00000507533 XKRYO14609 159 aa11.28□□□□□ -0.6
DDR1-260ENST00000507533 GMDSO60547 372 aa11.28□□□□□ -0.6
DDR1-260ENST00000507533 TIPRLO75663 272 aa11.28□□□□□ -0.6
DDR1-260ENST00000507533 LHBP01229 141 aa11.28□□□□□ -0.6
DDR1-260ENST00000507533 GASTP01350 101 aa11.28□□□□□ -0.6
DDR1-260ENST00000507533 GRPP07492 148 aa11.28□□□□□ -0.6
DDR1-260ENST00000507533 FXYD6P3P58550 94 aa11.28□□□□□ -0.6
DDR1-260ENST00000507533 ACTR3P61158 418 aa11.28□□□□□ -0.6
DDR1-260ENST00000507533 SLC35A2P78381 396 aa11.28□□□□□ -0.6
DDR1-260ENST00000507533 MALLQ13021 153 aa11.28□□□□□ -0.6
DDR1-260ENST00000507533 DOC2BQ14184 412 aa11.28□□□□□ -0.6
DDR1-260ENST00000507533 RFX4Q33E94 735 aa11.28□□□□□ -0.6
DDR1-260ENST00000507533 NCR3LG1Q68D85 454 aa11.28□□□□□ -0.6
DDR1-260ENST00000507533 SMARCD3Q6STE5 483 aa11.28□□□□□ -0.6
DDR1-260ENST00000507533 COLCA1Q6ZS62 124 aa11.28□□□□□ -0.6
DDR1-260ENST00000507533 PGAP1Q75T13 922 aa11.28□□□□□ -0.6
DDR1-260ENST00000507533 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.28□□□□□ -0.6
DDR1-260ENST00000507533 GLB1L2Q8IW92 636 aa11.28□□□□□ -0.6
DDR1-260ENST00000507533 AQP11Q8NBQ7 271 aa11.28□□□□□ -0.6
DDR1-260ENST00000507533 OR10G2Q8NGC3 310 aa11.28□□□□□ -0.6
DDR1-260ENST00000507533 GIPC3Q8TF64 312 aa11.28□□□□□ -0.6
DDR1-260ENST00000507533 WIPF2Q8TF74 440 aaPredicted RBP11.28□□□□□ -0.6
DDR1-260ENST00000507533 RCC1LQ96I51 464 aaKnown RBP11.28□□□□□ -0.6
DDR1-260ENST00000507533 RAB3IPQ96QF0 476 aaPredicted RBP11.28□□□□□ -0.6
DDR1-260ENST00000507533 GPX7Q96SL4 187 aaPredicted RBP11.28□□□□□ -0.6
DDR1-260ENST00000507533 DCTN5Q9BTE1 182 aa11.28□□□□□ -0.6
DDR1-260ENST00000507533 DGCR6LQ9BY27 220 aa11.28□□□□□ -0.6
DDR1-260ENST00000507533 HDHD2Q9H0R4 259 aa11.28□□□□□ -0.6
DDR1-260ENST00000507533 MEGF9Q9H1U4 602 aa11.28□□□□□ -0.6
DDR1-260ENST00000507533 OR52D1Q9H346 318 aa11.28□□□□□ -0.6
DDR1-260ENST00000507533 COA3Q9Y2R0 106 aaPredicted RBP11.28□□□□□ -0.6
DDR1-260ENST00000507533 POLR1DQ9Y2S0 133 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms