RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 STRAPQ9Y3F4 350 aaKnown RBP15.71■□□□□ 0.11
NUP54-205ENST00000507257 RAD51DO75771 328 aa15.7■□□□□ 0.1
NUP54-205ENST00000507257 MPIG6BO95866 241 aa15.7■□□□□ 0.1
NUP54-205ENST00000507257 IFNA2P01563 188 aa15.7■□□□□ 0.1
NUP54-205ENST00000507257 TMEM33P57088 247 aa15.7■□□□□ 0.1
NUP54-205ENST00000507257 HSD11B2P80365 405 aa15.7■□□□□ 0.1
NUP54-205ENST00000507257 PPA1Q15181 289 aa15.7■□□□□ 0.1
NUP54-205ENST00000507257 MIDNQ504T8 468 aa15.7■□□□□ 0.1
NUP54-205ENST00000507257 OR2A2Q6IF42 318 aa15.7■□□□□ 0.1
NUP54-205ENST00000507257 RTN4RL2Q86UN3 420 aa15.7■□□□□ 0.1
NUP54-205ENST00000507257 TMEM104Q8NE00 496 aa15.7■□□□□ 0.1
NUP54-205ENST00000507257 ZNF296Q8WUU4 475 aaPredicted RBP15.7■□□□□ 0.1
NUP54-205ENST00000507257 MRPL38Q96DV4 380 aaKnown RBP15.7■□□□□ 0.1
NUP54-205ENST00000507257 MMABQ96EY8 250 aaPredicted RBP15.7■□□□□ 0.1
NUP54-205ENST00000507257 YPEL4Q96NS1 127 aa15.7■□□□□ 0.1
NUP54-205ENST00000507257 IP6K3Q96PC2 410 aa15.7■□□□□ 0.1
NUP54-205ENST00000507257 PLA2G2FQ9BZM2 168 aa15.7■□□□□ 0.1
NUP54-205ENST00000507257 LANCL2Q9NS86 450 aa15.7■□□□□ 0.1
NUP54-205ENST00000507257 CENPMQ9NSP4 180 aa15.7■□□□□ 0.1
NUP54-205ENST00000507257 GSKIPQ9P0R6 139 aa15.7■□□□□ 0.1
NUP54-205ENST00000507257 HS3ST3A1Q9Y663 406 aa15.7■□□□□ 0.1
NUP54-205ENST00000507257 FOXI3A8MTJ6 420 aaPredicted RBP15.7■□□□□ 0.1
NUP54-205ENST00000507257 NUDT14O95848 222 aa15.7■□□□□ 0.1
NUP54-205ENST00000507257 ZNF20P17024 532 aa15.7■□□□□ 0.1
NUP54-205ENST00000507257 GLRA1P23415 457 aa15.7■□□□□ 0.1
NUP54-205ENST00000507257 RBMXP38159 391 aaKnown RBP15.7■□□□□ 0.1
NUP54-205ENST00000507257 SULT1A1P50225 295 aa15.7■□□□□ 0.1
NUP54-205ENST00000507257 RAB2AP61019 212 aa15.7■□□□□ 0.1
NUP54-205ENST00000507257 ARL6IP1Q15041 203 aa15.7■□□□□ 0.1
NUP54-205ENST00000507257 IAH1Q2TAA2 248 aaPredicted RBP15.7■□□□□ 0.1
NUP54-205ENST00000507257 KRBOX4Q5JUW0 171 aa15.7■□□□□ 0.1
NUP54-205ENST00000507257 PNLDC1Q8NA58 520 aaKnown RBP15.7■□□□□ 0.1
NUP54-205ENST00000507257 LFNGQ8NES3 379 aa15.7■□□□□ 0.1
NUP54-205ENST00000507257 SLC22A8Q8TCC7 542 aa15.7■□□□□ 0.1
NUP54-205ENST00000507257 GPR119Q8TDV5 335 aa15.7■□□□□ 0.1
NUP54-205ENST00000507257 SSC4DQ8WTU2 575 aa15.7■□□□□ 0.1
NUP54-205ENST00000507257 GINS3Q9BRX5 216 aa15.7■□□□□ 0.1
NUP54-205ENST00000507257 TBL1XR1Q9BZK7 514 aa15.7■□□□□ 0.1
NUP54-205ENST00000507257 SPACA1Q9HBV2 294 aa15.7■□□□□ 0.1
NUP54-205ENST00000507257 PRR13Q9NZ81 148 aa15.7■□□□□ 0.1
NUP54-205ENST00000507257 TREM2Q9NZC2 230 aa15.7■□□□□ 0.1
NUP54-205ENST00000507257 KLHL13Q9P2N7 655 aa15.7■□□□□ 0.1
NUP54-205ENST00000507257 C14orf166Q9Y224 244 aaKnown RBP15.7■□□□□ 0.1
NUP54-205ENST00000507257 NPIPA5E9PKD4 350 aa15.69■□□□□ 0.1
NUP54-205ENST00000507257 MS4A18H0YCH9 400 aa15.69■□□□□ 0.1
NUP54-205ENST00000507257 SOX1O00570 391 aaPredicted RBP15.69■□□□□ 0.1
NUP54-205ENST00000507257 RRP8O43159 456 aaKnown RBP15.69■□□□□ 0.1
NUP54-205ENST00000507257 TXNL1O43396 289 aa15.69■□□□□ 0.1
NUP54-205ENST00000507257 HOXB5P09067 269 aa15.69■□□□□ 0.1
NUP54-205ENST00000507257 NQO2P16083 231 aa15.69■□□□□ 0.1
NUP54-205ENST00000507257 PI3P19957 117 aa15.69■□□□□ 0.1
NUP54-205ENST00000507257 COL9A1P20849 921 aa15.69■□□□□ 0.1
NUP54-205ENST00000507257 AKT2P31751 481 aa15.69■□□□□ 0.1
NUP54-205ENST00000507257 AKR1C3P42330 323 aa15.69■□□□□ 0.1
NUP54-205ENST00000507257 ALDH3B1P43353 468 aa15.69■□□□□ 0.1
NUP54-205ENST00000507257 ID4P47928 161 aa15.69■□□□□ 0.1
NUP54-205ENST00000507257 GABRA4P48169 554 aa15.69■□□□□ 0.1
NUP54-205ENST00000507257 MS4A18Q3C1V0 323 aa15.69■□□□□ 0.1
NUP54-205ENST00000507257 RTL6Q6ICC9 239 aa15.69■□□□□ 0.1
NUP54-205ENST00000507257 TMEM151BQ8IW70 566 aa15.69■□□□□ 0.1
NUP54-205ENST00000507257 FNDC9Q8TBE3 224 aa15.69■□□□□ 0.1
NUP54-205ENST00000507257 ZNF721Q8TF20 911 aa15.69■□□□□ 0.1
NUP54-205ENST00000507257 SLC25A43Q8WUT9 341 aaPredicted RBP15.69■□□□□ 0.1
NUP54-205ENST00000507257 DECR2Q9NUI1 292 aa15.69■□□□□ 0.1
NUP54-205ENST00000507257 NPIPA1Q9UND3 350 aa15.69■□□□□ 0.1
NUP54-205ENST00000507257 M0R036 132 aa15.68■□□□□ 0.1
NUP54-205ENST00000507257 ZNF354AO60765 605 aaPredicted RBP15.68■□□□□ 0.1
NUP54-205ENST00000507257 DDAH2O95865 285 aa15.68■□□□□ 0.1
NUP54-205ENST00000507257 SFTPBP07988 381 aa15.68■□□□□ 0.1
NUP54-205ENST00000507257 HLA-DOBP13765 273 aa15.68■□□□□ 0.1
NUP54-205ENST00000507257 HOXA5P20719 270 aa15.68■□□□□ 0.1
NUP54-205ENST00000507257 BCKDHBP21953 392 aa15.68■□□□□ 0.1
NUP54-205ENST00000507257 CCL1P22362 96 aa15.68■□□□□ 0.1
NUP54-205ENST00000507257 PTGER4P35408 488 aa15.68■□□□□ 0.1
NUP54-205ENST00000507257 HHEXQ03014 270 aa15.68■□□□□ 0.1
NUP54-205ENST00000507257 FMODQ06828 376 aa15.68■□□□□ 0.1
NUP54-205ENST00000507257 ARHGAP5-AS1Q96IT6 56 aa15.68■□□□□ 0.1
NUP54-205ENST00000507257 PBDC1Q9BVG4 233 aa15.68■□□□□ 0.1
NUP54-205ENST00000507257 FOXQ1Q9C009 403 aa15.68■□□□□ 0.1
NUP54-205ENST00000507257 TOLLIPQ9H0E2 274 aa15.68■□□□□ 0.1
NUP54-205ENST00000507257 SLC35B3Q9H1N7 401 aa15.68■□□□□ 0.1
NUP54-205ENST00000507257 OPA3Q9H6K4 179 aa15.68■□□□□ 0.1
NUP54-205ENST00000507257 IGKV3D-11A0A0A0MRZ8 115 aa15.68■□□□□ 0.1
NUP54-205ENST00000507257 BORCS7-ASMTA0A0B4J1R7 106 aa15.68■□□□□ 0.1
NUP54-205ENST00000507257 UMAD1C9J7I0 102 aa15.68■□□□□ 0.1
NUP54-205ENST00000507257 E5RGE8 158 aa15.68■□□□□ 0.1
NUP54-205ENST00000507257 WISP1O95388 367 aa15.68■□□□□ 0.1
NUP54-205ENST00000507257 CTSDP07339 412 aaPredicted RBP15.68■□□□□ 0.1
NUP54-205ENST00000507257 HOXB2P14652 356 aa15.68■□□□□ 0.1
NUP54-205ENST00000507257 ARFRP1Q13795 201 aa15.68■□□□□ 0.1
NUP54-205ENST00000507257 ZNF239Q16600 458 aaKnown RBP15.68■□□□□ 0.1
NUP54-205ENST00000507257 AKIRIN2Q53H80 203 aa15.68■□□□□ 0.1
NUP54-205ENST00000507257 FAM219AQ8IW50 185 aa15.68■□□□□ 0.1
NUP54-205ENST00000507257 PRR22Q8IZ63 422 aa15.68■□□□□ 0.1
NUP54-205ENST00000507257 OR10H5Q8NGA6 315 aa15.68■□□□□ 0.1
NUP54-205ENST00000507257 MFSD8Q8NHS3 518 aa15.68■□□□□ 0.1
NUP54-205ENST00000507257 C11orf40Q8WZ69 217 aa15.68■□□□□ 0.1
NUP54-205ENST00000507257 ISOC2Q96AB3 205 aa15.68■□□□□ 0.1
NUP54-205ENST00000507257 GGACTQ9BVM4 153 aa15.68■□□□□ 0.1
NUP54-205ENST00000507257 OR10A2Q9H208 303 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms