RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 HMX3A6NHT5 357 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 CPSF4LA6NMK7 179 aaKnown RBP5.57□□□□□ -1.52
VCAN-206ENST00000505615 ACOT8O14734 319 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 ITM2AO43736 263 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 RAMP3O60896 148 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 OR7A10O76100 309 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 SHBGP04278 402 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 AMY2AP04746 511 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 ANXA2P07355 339 aaKnown RBP5.57□□□□□ -1.52
VCAN-206ENST00000505615 NR2C1P13056 603 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 LBPP18428 481 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 ARL3P36405 182 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 TGM4P49221 684 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 THBS3P49746 956 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 LGALS4P56470 323 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 MALLQ13021 153 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 FADDQ13158 208 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 LSAMPQ13449 338 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 TOP3AQ13472 1001 aaPredicted RBP5.57□□□□□ -1.52
VCAN-206ENST00000505615 PCK2Q16822 640 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 ENTPD8Q5MY95 495 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 OTPQ5XKR4 325 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 TTC33Q6PID6 262 aaPredicted RBP5.57□□□□□ -1.52
VCAN-206ENST00000505615 ZNF781Q8N8C0 355 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 GPR32P1Q8NGA4 272 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 OR4D11Q8NGI4 311 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 OR5L1Q8NGL2 311 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 OR6T1Q8NGN1 323 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 OR1F12Q8NHA8 337 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 PFN4Q8NHR9 129 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 TCP10LQ8TDR4 215 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 ADAMTS16Q8TE57 1224 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 ACOT11Q8WXI4 607 aaPredicted RBP5.57□□□□□ -1.52
VCAN-206ENST00000505615 SEH1LQ96EE3 360 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 APOPT1Q96IL0 206 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 C16orf92Q96LL3 132 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 MCRIP2Q9BUT9 160 aaKnown RBP5.57□□□□□ -1.52
VCAN-206ENST00000505615 RAD21L1Q9H4I0 556 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 EDA2RQ9HAV5 297 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 C1orf123Q9NWV4 160 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 SLC7A7Q9UM01 511 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 NDUFAF1Q9Y375 327 aa5.57□□□□□ -1.52
VCAN-206ENST00000505615 FAM90A8PA6NJQ4 464 aa5.56□□□□□ -1.52
VCAN-206ENST00000505615 C5orf58C9J3I9 102 aa5.56□□□□□ -1.52
VCAN-206ENST00000505615 JTBO76095 146 aa5.56□□□□□ -1.52
VCAN-206ENST00000505615 ALDOBP05062 364 aa5.56□□□□□ -1.52
VCAN-206ENST00000505615 FUT1P19526 365 aa5.56□□□□□ -1.52
VCAN-206ENST00000505615 CA6P23280 308 aa5.56□□□□□ -1.52
VCAN-206ENST00000505615 ANOS1P23352 680 aa5.56□□□□□ -1.52
VCAN-206ENST00000505615 RAB13P51153 203 aa5.56□□□□□ -1.52
VCAN-206ENST00000505615 RPL27P61353 136 aaKnown RBP5.56□□□□□ -1.52
VCAN-206ENST00000505615 CDK6Q00534 326 aa5.56□□□□□ -1.52
VCAN-206ENST00000505615 IL5RAQ01344 420 aa5.56□□□□□ -1.52
VCAN-206ENST00000505615 AQP6Q13520 282 aa5.56□□□□□ -1.52
VCAN-206ENST00000505615 GK2Q14410 553 aaPredicted RBP5.56□□□□□ -1.52
VCAN-206ENST00000505615 OR8G1Q15617 311 aa5.56□□□□□ -1.52
VCAN-206ENST00000505615 RSPO1Q2MKA7 263 aaPredicted RBP5.56□□□□□ -1.52
VCAN-206ENST00000505615 KRTAP27-1Q3LI81 207 aa5.56□□□□□ -1.52
VCAN-206ENST00000505615 PLA1AQ53H76 456 aa5.56□□□□□ -1.52
VCAN-206ENST00000505615 REEP3Q6NUK4 255 aa5.56□□□□□ -1.52
VCAN-206ENST00000505615 UNQ9370/PRO34162Q6UXP9 181 aa5.56□□□□□ -1.52
VCAN-206ENST00000505615 C18orf65Q6ZTR6 163 aa5.56□□□□□ -1.52
VCAN-206ENST00000505615 LHFPL4Q7Z7J7 247 aa5.56□□□□□ -1.52
VCAN-206ENST00000505615 KRT73Q86Y46 540 aa5.56□□□□□ -1.52
VCAN-206ENST00000505615 RBM45Q8IUH3 476 aaKnown RBP5.56□□□□□ -1.52
VCAN-206ENST00000505615 FNDC8Q8TC99 324 aa5.56□□□□□ -1.52
VCAN-206ENST00000505615 LIPHQ8WWY8 451 aa5.56□□□□□ -1.52
VCAN-206ENST00000505615 LYZL4Q96KX0 146 aa5.56□□□□□ -1.52
VCAN-206ENST00000505615 RBP7Q96R05 134 aa5.56□□□□□ -1.52
VCAN-206ENST00000505615 P2RX4Q99571 388 aa5.56□□□□□ -1.52
VCAN-206ENST00000505615 ADAT1Q9BUB4 502 aaKnown RBP5.56□□□□□ -1.52
VCAN-206ENST00000505615 SPATA5L1Q9BVQ7 753 aa5.56□□□□□ -1.52
VCAN-206ENST00000505615 HCAR1Q9BXC0 346 aa5.56□□□□□ -1.52
VCAN-206ENST00000505615 C20orf27Q9GZN8 174 aa5.56□□□□□ -1.52
VCAN-206ENST00000505615 RABEP2Q9H5N1 569 aa5.56□□□□□ -1.52
VCAN-206ENST00000505615 ZMAT5Q9UDW3 170 aaKnown RBP5.56□□□□□ -1.52
VCAN-206ENST00000505615 TRAPPC13A5PLN9 417 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 PRORSD1PA6NEY8 169 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 H7C1C5 153 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 F2RL2O00254 374 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 CLIC1O00299 241 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 SDHDO14521 159 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 RER1O15258 196 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 POLR3GO15318 223 aaPredicted RBP5.55□□□□□ -1.52
VCAN-206ENST00000505615 NDUFB3O43676 98 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 ANP32DO95626 131 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 MT-ND1P03886 318 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 TFF1P04155 84 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 IL6P05231 212 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 BPGMP07738 259 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 MUC1P15941 1255 aaPredicted RBP5.55□□□□□ -1.52
VCAN-206ENST00000505615 AQP1P29972 269 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 GUCA1AP43080 201 aaPredicted RBP5.55□□□□□ -1.52
VCAN-206ENST00000505615 LUMP51884 338 aaPredicted RBP5.55□□□□□ -1.52
VCAN-206ENST00000505615 SLURP1P55000 103 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 LCN6P62502 163 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 MICBQ29980 383 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 RABL3Q5HYI8 236 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 KHDC1LQ5JSQ8 128 aa5.55□□□□□ -1.52
VCAN-206ENST00000505615 LDLRAD2Q5SZI1 272 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms