RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 SH3GL1Q99961 368 aa4.85□□□□□ -1.63
GYPB-204ENST00000504951 HCAR1Q9BXC0 346 aa4.85□□□□□ -1.63
GYPB-204ENST00000504951 PRSS22Q9GZN4 317 aa4.85□□□□□ -1.63
GYPB-204ENST00000504951 PNRC2Q9NPJ4 139 aaKnown RBP4.85□□□□□ -1.63
GYPB-204ENST00000504951 NRIP3Q9NQ35 241 aa4.85□□□□□ -1.63
GYPB-204ENST00000504951 VSX1Q9NZR4 365 aaPredicted RBP4.85□□□□□ -1.63
GYPB-204ENST00000504951 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.85□□□□□ -1.63
GYPB-204ENST00000504951 RPS6KA6Q9UK32 745 aa4.85□□□□□ -1.63
GYPB-204ENST00000504951 PITPNC1Q9UKF7 332 aa4.85□□□□□ -1.63
GYPB-204ENST00000504951 TSSC4Q9Y5U2 329 aaPredicted RBP4.85□□□□□ -1.63
GYPB-204ENST00000504951 IER3IP1Q9Y5U9 82 aa4.85□□□□□ -1.63
GYPB-204ENST00000504951 HUWE1Q7Z6Z7 4374 aaKnown RBP4.85□□□□□ -1.63
GYPB-204ENST00000504951 TRBV4-1A0A0J9YWV2 114 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 A0A1B0GW55 424 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 CXCR6O00574 342 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 NME4O00746 187 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 XKRYO14609 159 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 CHST1O43916 411 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 DIRAS1O95057 198 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 SERPINA1P01009 418 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 NPPAP01160 153 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 ACSM4P0C7M7 580 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 DUX4L2P0CJ85 424 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 DUX4L3P0CJ86 424 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 DUX4L4P0CJ87 422 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 DUX4L5P0CJ88 424 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 DUX4L6P0CJ89 424 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 DUX4L7P0CJ90 424 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 LYL1P12980 280 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 NCK1P16333 377 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 CA6P23280 308 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 SDHAP31040 664 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 GGT2P36268 569 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 RPS27P42677 84 aaKnown RBP4.84□□□□□ -1.63
GYPB-204ENST00000504951 CENPAP49450 140 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 DLX1P56177 255 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 CAV3P56539 151 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 LIPEQ05469 1076 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 CNN3Q15417 329 aaKnown RBP4.84□□□□□ -1.63
GYPB-204ENST00000504951 IFI44LQ53G44 452 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 TCTEX1D4Q5JR98 221 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 SLC18B1Q6NT16 456 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 DUX4L9Q6RFH8 374 aaPredicted RBP4.84□□□□□ -1.63
GYPB-204ENST00000504951 UNQ9370/PRO34162Q6UXP9 181 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 ZNF826PQ6ZT77 177 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 LINC00346Q8IVM7 164 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 PDZD9Q8IXQ8 264 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 OR6V1Q8N148 313 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 LYG1Q8N1E2 194 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 FAM86B1Q8N7N1 296 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 LINC00482Q8N8I6 264 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 BOLLQ8N9W6 283 aaKnown RBP4.84□□□□□ -1.63
GYPB-204ENST00000504951 Q8NFD4 153 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 SLC26A10Q8NG04 563 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 OR51G2Q8NGK0 314 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 ZNRF4Q8WWF5 429 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 SLCO4A1Q96BD0 722 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 RCN3Q96D15 328 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 RSRC1Q96IZ7 334 aaKnown RBP4.84□□□□□ -1.63
GYPB-204ENST00000504951 GPX7Q96SL4 187 aaPredicted RBP4.84□□□□□ -1.63
GYPB-204ENST00000504951 NMNAT3Q96T66 252 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 HDHD2Q9H0R4 259 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 SEMA6AQ9H2E6 1030 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 MMADHCQ9H3L0 296 aaPredicted RBP4.84□□□□□ -1.63
GYPB-204ENST00000504951 FN3KQ9H479 309 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 FGFR1OP2Q9NVK5 253 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 ADA2Q9NZK5 511 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 MRPL15Q9P015 296 aaKnown RBP4.84□□□□□ -1.63
GYPB-204ENST00000504951 DUX4Q9UBX2 424 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 B9D1Q9UPM9 204 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 AURKCQ9UQB9 309 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 LRP12Q9Y561 859 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 PCDHGB5Q9Y5G0 923 aa4.84□□□□□ -1.63
GYPB-204ENST00000504951 IGHV3OR15-7A0A075B7D8 119 aa4.83□□□□□ -1.64
GYPB-204ENST00000504951 OR6C68A6NDL8 312 aa4.83□□□□□ -1.64
GYPB-204ENST00000504951 A6NDX4 124 aa4.83□□□□□ -1.64
GYPB-204ENST00000504951 BBIP1A8MTZ0 92 aa4.83□□□□□ -1.64
GYPB-204ENST00000504951 HMGB1P1B2RPK0 211 aaPredicted RBP4.83□□□□□ -1.64
GYPB-204ENST00000504951 F5H5K5 113 aa4.83□□□□□ -1.64
GYPB-204ENST00000504951 NDUFB3O43676 98 aa4.83□□□□□ -1.64
GYPB-204ENST00000504951 GLCEO94923 617 aa4.83□□□□□ -1.64
GYPB-204ENST00000504951 NDUFB2O95178 105 aa4.83□□□□□ -1.64
GYPB-204ENST00000504951 TXNDC12O95881 172 aa4.83□□□□□ -1.64
GYPB-204ENST00000504951 GYPAP02724 150 aa4.83□□□□□ -1.64
GYPB-204ENST00000504951 PF4P02776 101 aa4.83□□□□□ -1.64
GYPB-204ENST00000504951 LCATP04180 440 aa4.83□□□□□ -1.64
GYPB-204ENST00000504951 PF4V1P10720 104 aa4.83□□□□□ -1.64
GYPB-204ENST00000504951 RAB6AP20340 208 aa4.83□□□□□ -1.64
GYPB-204ENST00000504951 MDH1P40925 334 aaKnown RBP4.83□□□□□ -1.64
GYPB-204ENST00000504951 GSK3BP49841 420 aa4.83□□□□□ -1.64
GYPB-204ENST00000504951 DGCR2P98153 550 aa4.83□□□□□ -1.64
GYPB-204ENST00000504951 SPIBQ01892 262 aa4.83□□□□□ -1.64
GYPB-204ENST00000504951 ZNF92Q03936 586 aa4.83□□□□□ -1.64
GYPB-204ENST00000504951 ECH1Q13011 328 aa4.83□□□□□ -1.64
GYPB-204ENST00000504951 BLMHQ13867 455 aa4.83□□□□□ -1.64
GYPB-204ENST00000504951 OR8B8Q15620 311 aa4.83□□□□□ -1.64
GYPB-204ENST00000504951 ZNF124Q15973 351 aa4.83□□□□□ -1.64
GYPB-204ENST00000504951 MICBQ29980 383 aa4.83□□□□□ -1.64
GYPB-204ENST00000504951 SNAI3Q3KNW1 292 aa4.83□□□□□ -1.64
GYPB-204ENST00000504951 LRRC10Q5BKY1 277 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms