RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 RPA3P35244 121 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 CTRLP40313 264 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 PPICP45877 212 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 HCAR3P49019 387 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 ZNF133P52736 654 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR12D2P58182 307 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 RHOAP61586 193 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 VBP1P61758 197 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 NUTF2P61970 127 aaKnown RBP1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 RPL18AQ02543 176 aaKnown RBP1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 MXD1Q05195 221 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 PRKCDQ05655 676 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 KDSRQ06136 332 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 CAPRIN1Q14444 709 aaKnown RBP1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 PRPSAP1Q14558 356 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 GUSBP1Q15486 140 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 ZNHIT3Q15649 155 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 COX19Q49B96 90 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 TMEM31Q5JXX7 168 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 CASC10Q5T4H9 136 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 FAM27D1Q5T7N8 215 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 ANKRD22Q5VYY1 191 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 HBMQ6B0K9 141 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 DRAM2Q6UX65 266 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 C12orf54Q6X4T0 127 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 PP632Q6XCG6 107 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 RFLNAQ6ZTI6 216 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 H2AFVQ71UI9 128 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 OAFQ86UD1 273 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 RALGPS2Q86X27 583 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 SLC30A8Q8IWU4 369 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 DAW1Q8N136 415 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 RNF175Q8N4F7 328 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 ZADH2Q8N4Q0 377 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 LINC01555Q8NAE3 123 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 ACBD4Q8NC06 268 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 CHST4Q8NCG5 386 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR8G5Q8NG78 346 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR4F15Q8NGB8 312 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR10W1Q8NGF6 305 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR51G1Q8NGK1 321 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR5L1Q8NGL2 311 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR5AR1Q8NGP9 310 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 ZFAND1Q8TCF1 268 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 SFXN5Q8TD22 340 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 RNASEH2CQ8TDP1 164 aaKnown RBP1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 RNF138Q8WVD3 245 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 RNF133Q8WVZ7 376 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 ESR2Q92731 530 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 RDH5Q92781 318 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 DYNLL2Q96FJ2 89 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 SLC35E1Q96K37 410 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 BTN2A3PQ96KV6 586 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 COL21A1Q96P44 957 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 HBEGFQ99075 208 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 RASL11BQ9BPW5 248 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 NRIP2Q9BQI9 281 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR51B5Q9H339 312 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 DSN1Q9H410 356 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 PRORYQ9H606 182 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 RPF2Q9H7B2 306 aaKnown RBP1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 TMEM9BQ9NQ34 198 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 IFT46Q9NQC8 304 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 MMP26Q9NRE1 261 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 NLE1Q9NVX2 485 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 PLEKHJ1Q9NW61 149 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 BABAM2Q9NXR7 383 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 FBXL3Q9UKT7 428 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 TFR2Q9UP52 801 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 NEU3Q9UQ49 428 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 ST3GAL6Q9Y274 331 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 SNX24Q9Y343 169 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 NEUROG3Q9Y4Z2 214 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 POLR3HQ9Y535 204 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 SLC25A15Q9Y619 301 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 USH1CQ9Y6N9 552 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 AK9Q5TCS8 1911 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 MAP3K5Q99683 1374 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 IGHV2OR16-5A0A0B4J2B6 119 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 IGKV1D-13A0A0B4J2D9 117 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 KIR2DS1A0A191URI9 304 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 PINLYPA6NC86 204 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR6C70A6NIJ9 312 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 ZNF233A6NK53 670 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 SYCE1LA8MT33 242 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 LRRN3E7EW58 273 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 TNFRSF11BO00300 401 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 CDIPTO14735 213 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 UBDO15205 165 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 SLC31A2O15432 143 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 ATP8B1O43520 1251 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 FAM189A1O60320 539 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 HPGDSO60760 199 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 UPK1BO75841 260 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 TNFSF13O75888 250 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR5F1O95221 314 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 UTS2O95399 124 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 C6orf47O95873 294 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 PTHP01270 115 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 INSP01308 110 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms