RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 GSG1Q2KHT4 349 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 RSPO1Q2MKA7 263 aaPredicted RBP4.12□□□□□ -1.75
CMSS1-209ENST00000497345 Q499Y3 187 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 YIF1BQ5BJH7 314 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 GLYATL3Q5SZD4 288 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 RIPPLY2Q5TAB7 128 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 ANKRD16Q6P6B7 361 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 CD200R1LQ6Q8B3 271 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 PAMR1Q6UXH9 720 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 UNQ9370/PRO34162Q6UXP9 181 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 ZNF704Q6ZNC4 412 aaPredicted RBP4.12□□□□□ -1.75
CMSS1-209ENST00000497345 GDPGP1Q6ZNW5 385 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 RHOUQ7L0Q8 258 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 BHLHA15Q7RTS1 189 aaPredicted RBP4.12□□□□□ -1.75
CMSS1-209ENST00000497345 NR2C2APQ86WQ0 139 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 LIX1LQ8IVB5 337 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 LAX1Q8IWV1 398 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 IZUMO1Q8IYV9 350 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 ELMOD2Q8IZ81 293 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 BATF2Q8N1L9 274 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 PAQR4Q8N4S7 273 aaPredicted RBP4.12□□□□□ -1.75
CMSS1-209ENST00000497345 JAGN1Q8N5M9 183 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 OR51A2Q8NGJ7 313 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 OR6Q1Q8NGQ2 317 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 OR1J2Q8NGS2 313 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 OR13C9Q8NGT0 318 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 OR6K3Q8NGY3 331 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 ZNF671Q8TAW3 534 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 TRMT10AQ8TBZ6 339 aaKnown RBP4.12□□□□□ -1.75
CMSS1-209ENST00000497345 TMEM106AQ96A25 262 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 RFT1Q96AA3 541 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 SLC25A46Q96AG3 418 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 SGK3Q96BR1 496 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 ADAT3Q96EY9 351 aaPredicted RBP4.12□□□□□ -1.75
CMSS1-209ENST00000497345 REEP6Q96HR9 211 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 LYZL4Q96KX0 146 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 SPACA5Q96QH8 159 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 SLX1AQ9BQ83 275 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 BCL7BQ9BQE9 202 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 SLC30A2Q9BRI3 323 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 SLIRPQ9GZT3 109 aaKnown RBP4.12□□□□□ -1.75
CMSS1-209ENST00000497345 HDHD2Q9H0R4 259 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 TP63Q9H3D4 680 aaPredicted RBP4.12□□□□□ -1.75
CMSS1-209ENST00000497345 PLEKHA1Q9HB21 404 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 PLGRKTQ9HBL7 147 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 CDH20Q9HBT6 801 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 GPR173Q9NS66 373 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 DDX28Q9NUL7 540 aaKnown RBP4.12□□□□□ -1.75
CMSS1-209ENST00000497345 ZNF224Q9NZL3 707 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 CCDC59Q9P031 241 aaKnown RBP4.12□□□□□ -1.75
CMSS1-209ENST00000497345 CKLFQ9UBR5 152 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 PLEKHB1Q9UF11 243 aaPredicted RBP4.12□□□□□ -1.75
CMSS1-209ENST00000497345 HHLA2Q9UM44 414 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 PIGLQ9Y2B2 252 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 CFAP54Q96N23 3096 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 WDFY3Q8IZQ1 3526 aa4.12□□□□□ -1.75
CMSS1-209ENST00000497345 NCOA6Q14686 2063 aaPredicted RBP4.11□□□□□ -1.75
CMSS1-209ENST00000497345 LOC100509620A0A075B734 347 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 TRBV5-7A0A0A0MS05 114 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 IGHV3-64DA0A0J9YX35 117 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 TRBV5-5A0A0J9YX44 114 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 A0A1B0GTI1 187 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 FAM230AA0A1W2PPH8 454 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 MBD3L4A6NDZ8 208 aaPredicted RBP4.11□□□□□ -1.75
CMSS1-209ENST00000497345 MBD3L3A6NE82 208 aaPredicted RBP4.11□□□□□ -1.75
CMSS1-209ENST00000497345 OR6C6A6NF89 314 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 GGT3PA6NGU5 568 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 MBD3L5A6NJ08 208 aaPredicted RBP4.11□□□□□ -1.75
CMSS1-209ENST00000497345 RPL36A-HNRNPH2H7BZ11 118 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 PYCARD-AS1I3L0S3 204 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 M0R1B8 84 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 CCL21O00585 134 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 HOXA3O43365 443 aaPredicted RBP4.11□□□□□ -1.75
CMSS1-209ENST00000497345 UBL3O95164 117 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 NGFP01138 241 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 CGAP01215 116 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 CD2P06729 351 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 HCKP08631 526 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 MMP7P09237 267 aaPredicted RBP4.11□□□□□ -1.75
CMSS1-209ENST00000497345 UCHL1P09936 223 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 UBCP0CG48 685 aaKnown RBP4.11□□□□□ -1.75
CMSS1-209ENST00000497345 ADRA2CP18825 462 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 ATF1P18846 271 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 CD53P19397 219 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 CTSSP25774 331 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 MAPK3P27361 379 aaPredicted RBP4.11□□□□□ -1.75
CMSS1-209ENST00000497345 TNFSF8P32971 234 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 ARR3P36575 388 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 CCR9P51686 369 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 CASP6P55212 293 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 PPP3R1P63098 170 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 HIST1H3AP68431 136 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 TGFBR3Q03167 851 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 ZNF92Q03936 586 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 FAM27E3Q08E93 113 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 ECH1Q13011 328 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 ZNF846Q147U1 533 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 GABRA6Q16445 453 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 MOGQ16653 247 aa4.11□□□□□ -1.75
CMSS1-209ENST00000497345 ST3GAL2Q16842 350 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms