RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 SLC18B1Q6NT16 456 aa11.19□□□□□ -0.62
ERCC3-209ENST00000494464 SYS1Q8N2H4 156 aa11.19□□□□□ -0.62
ERCC3-209ENST00000494464 OR10H4Q8NGA5 316 aa11.19□□□□□ -0.62
ERCC3-209ENST00000494464 OR2T27Q8NH04 317 aa11.19□□□□□ -0.62
ERCC3-209ENST00000494464 MRPL48Q96GC5 212 aaKnown RBP11.19□□□□□ -0.62
ERCC3-209ENST00000494464 EGLN1Q9GZT9 426 aa11.19□□□□□ -0.62
ERCC3-209ENST00000494464 MMP27Q9H306 513 aa11.19□□□□□ -0.62
ERCC3-209ENST00000494464 SRA1Q9HD15 236 aaKnown RBP11.19□□□□□ -0.62
ERCC3-209ENST00000494464 PALMDQ9NP74 551 aa11.19□□□□□ -0.62
ERCC3-209ENST00000494464 TRIM36Q9NQ86 728 aa11.19□□□□□ -0.62
ERCC3-209ENST00000494464 BABAM2Q9NXR7 383 aa11.19□□□□□ -0.62
ERCC3-209ENST00000494464 CYB5R1Q9UHQ9 305 aa11.19□□□□□ -0.62
ERCC3-209ENST00000494464 PURGQ9UJV8 347 aaKnown RBP11.19□□□□□ -0.62
ERCC3-209ENST00000494464 GRIP1Q9Y3R0 1128 aa11.19□□□□□ -0.62
ERCC3-209ENST00000494464 SVEP1Q4LDE5 3571 aa11.19□□□□□ -0.62
ERCC3-209ENST00000494464 TRDV1A0A1B0GX56 115 aa11.18□□□□□ -0.62
ERCC3-209ENST00000494464 WNT9BO14905 357 aa11.18□□□□□ -0.62
ERCC3-209ENST00000494464 LALBAP00709 142 aa11.18□□□□□ -0.62
ERCC3-209ENST00000494464 MRPL3P09001 348 aaKnown RBP11.18□□□□□ -0.62
ERCC3-209ENST00000494464 DBHP09172 617 aa11.18□□□□□ -0.62
ERCC3-209ENST00000494464 RAC2P15153 192 aa11.18□□□□□ -0.62
ERCC3-209ENST00000494464 FGF9P31371 208 aaPredicted RBP11.18□□□□□ -0.62
ERCC3-209ENST00000494464 THBS2P35442 1172 aa11.18□□□□□ -0.62
ERCC3-209ENST00000494464 ENTPD1P49961 510 aa11.18□□□□□ -0.62
ERCC3-209ENST00000494464 CR1LQ2VPA4 569 aa11.18□□□□□ -0.62
ERCC3-209ENST00000494464 ZNF829Q3KNS6 432 aaPredicted RBP11.18□□□□□ -0.62
ERCC3-209ENST00000494464 ZNF404Q494X3 552 aa11.18□□□□□ -0.62
ERCC3-209ENST00000494464 FBXW12Q6X9E4 464 aa11.18□□□□□ -0.62
ERCC3-209ENST00000494464 CFAP77Q6ZQR2 320 aa11.18□□□□□ -0.62
ERCC3-209ENST00000494464 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.18□□□□□ -0.62
ERCC3-209ENST00000494464 EGFL6Q8IUX8 553 aa11.18□□□□□ -0.62
ERCC3-209ENST00000494464 CROCCP3Q8IVE0 287 aa11.18□□□□□ -0.62
ERCC3-209ENST00000494464 SLC35F2Q8IXU6 374 aa11.18□□□□□ -0.62
ERCC3-209ENST00000494464 OR5L1Q8NGL2 311 aa11.18□□□□□ -0.62
ERCC3-209ENST00000494464 OR6Q1Q8NGQ2 317 aa11.18□□□□□ -0.62
ERCC3-209ENST00000494464 OR2T4Q8NH00 348 aa11.18□□□□□ -0.62
ERCC3-209ENST00000494464 S100ZQ8WXG8 99 aa11.18□□□□□ -0.62
ERCC3-209ENST00000494464 BORCS5Q969J3 196 aa11.18□□□□□ -0.62
ERCC3-209ENST00000494464 APOBEC3DQ96AK3 386 aaPredicted RBP11.18□□□□□ -0.62
ERCC3-209ENST00000494464 HAVCR1Q96D42 359 aa11.18□□□□□ -0.62
ERCC3-209ENST00000494464 ZMYND19Q96E35 227 aaPredicted RBP11.18□□□□□ -0.62
ERCC3-209ENST00000494464 WDR12Q9GZL7 423 aaKnown RBP11.18□□□□□ -0.62
ERCC3-209ENST00000494464 MSL2Q9HCI7 577 aa11.18□□□□□ -0.62
ERCC3-209ENST00000494464 MRPL22Q9NWU5 206 aaKnown RBP11.18□□□□□ -0.62
ERCC3-209ENST00000494464 STARD10Q9Y365 291 aa11.18□□□□□ -0.62
ERCC3-209ENST00000494464 A0A1W2PQL4 384 aaPredicted RBP11.17□□□□□ -0.62
ERCC3-209ENST00000494464 SRD5A1P18405 259 aa11.17□□□□□ -0.62
ERCC3-209ENST00000494464 SOX6P35712 828 aa11.17□□□□□ -0.62
ERCC3-209ENST00000494464 LMO4P61968 165 aa11.17□□□□□ -0.62
ERCC3-209ENST00000494464 RPS25P62851 125 aaKnown RBP11.17□□□□□ -0.62
ERCC3-209ENST00000494464 SLC3A1Q07837 685 aa11.17□□□□□ -0.62
ERCC3-209ENST00000494464 ECH1Q13011 328 aa11.17□□□□□ -0.62
ERCC3-209ENST00000494464 TRAM1Q15629 374 aa11.17□□□□□ -0.62
ERCC3-209ENST00000494464 CDONQ4KMG0 1287 aa11.17□□□□□ -0.62
ERCC3-209ENST00000494464 CORO6Q6QEF8 472 aa11.17□□□□□ -0.62
ERCC3-209ENST00000494464 COLCA1Q6ZS62 124 aa11.17□□□□□ -0.62
ERCC3-209ENST00000494464 GLCCI1Q86VQ1 547 aa11.17□□□□□ -0.62
ERCC3-209ENST00000494464 KLBQ86Z14 1044 aa11.17□□□□□ -0.62
ERCC3-209ENST00000494464 LINC00346Q8IVM7 164 aa11.17□□□□□ -0.62
ERCC3-209ENST00000494464 OR2AJ1Q8NGZ0 328 aa11.17□□□□□ -0.62
ERCC3-209ENST00000494464 MCFD2Q8NI22 146 aa11.17□□□□□ -0.62
ERCC3-209ENST00000494464 CMBLQ96DG6 245 aa11.17□□□□□ -0.62
ERCC3-209ENST00000494464 TIMD4Q96H15 378 aa11.17□□□□□ -0.62
ERCC3-209ENST00000494464 MNTQ99583 582 aa11.17□□□□□ -0.62
ERCC3-209ENST00000494464 MDFIQ99750 246 aa11.17□□□□□ -0.62
ERCC3-209ENST00000494464 ATF6BQ99941 703 aa11.17□□□□□ -0.62
ERCC3-209ENST00000494464 NARFLQ9H6Q4 476 aa11.17□□□□□ -0.62
ERCC3-209ENST00000494464 ISG20L2Q9H9L3 353 aaKnown RBP11.17□□□□□ -0.62
ERCC3-209ENST00000494464 HMG20AQ9NP66 347 aa11.17□□□□□ -0.62
ERCC3-209ENST00000494464 EXOSC4Q9NPD3 245 aaKnown RBP11.17□□□□□ -0.62
ERCC3-209ENST00000494464 PNRC2Q9NPJ4 139 aaKnown RBP11.17□□□□□ -0.62
ERCC3-209ENST00000494464 AKIP1Q9NQ31 210 aa11.17□□□□□ -0.62
ERCC3-209ENST00000494464 TXNL4BQ9NX01 149 aaKnown RBP11.17□□□□□ -0.62
ERCC3-209ENST00000494464 WIPI2Q9Y4P8 454 aa11.17□□□□□ -0.62
ERCC3-209ENST00000494464 CACNG2Q9Y698 323 aa11.17□□□□□ -0.62
ERCC3-209ENST00000494464 IL1AP01583 271 aa11.16□□□□□ -0.62
ERCC3-209ENST00000494464 HLA-DQA2P01906 255 aa11.16□□□□□ -0.62
ERCC3-209ENST00000494464 HLA-DPB1P04440 258 aa11.16□□□□□ -0.62
ERCC3-209ENST00000494464 MSMBP08118 114 aa11.16□□□□□ -0.62
ERCC3-209ENST00000494464 TNFSF4P23510 183 aa11.16□□□□□ -0.62
ERCC3-209ENST00000494464 OPRL1P41146 370 aa11.16□□□□□ -0.62
ERCC3-209ENST00000494464 BMXP51813 675 aa11.16□□□□□ -0.62
ERCC3-209ENST00000494464 BLVRAP53004 296 aa11.16□□□□□ -0.62
ERCC3-209ENST00000494464 TNFAIP6P98066 277 aaPredicted RBP11.16□□□□□ -0.62
ERCC3-209ENST00000494464 DBPQ10586 325 aaPredicted RBP11.16□□□□□ -0.62
ERCC3-209ENST00000494464 ZNF846Q147U1 533 aa11.16□□□□□ -0.62
ERCC3-209ENST00000494464 AVPI1Q5T686 147 aa11.16□□□□□ -0.62
ERCC3-209ENST00000494464 Q6ZR03 302 aa11.16□□□□□ -0.62
ERCC3-209ENST00000494464 SLC16A9Q7RTY1 509 aa11.16□□□□□ -0.62
ERCC3-209ENST00000494464 HAVCR2Q8TDQ0 301 aa11.16□□□□□ -0.62
ERCC3-209ENST00000494464 RAB1CQ92928 201 aa11.16□□□□□ -0.62
ERCC3-209ENST00000494464 RAB39BQ96DA2 213 aa11.16□□□□□ -0.62
ERCC3-209ENST00000494464 C4orf36Q96KX1 117 aa11.16□□□□□ -0.62
ERCC3-209ENST00000494464 TBX5Q99593 518 aa11.16□□□□□ -0.62
ERCC3-209ENST00000494464 CDADC1Q9BWV3 514 aa11.16□□□□□ -0.62
ERCC3-209ENST00000494464 C1QTNF5Q9BXJ0 243 aa11.16□□□□□ -0.62
ERCC3-209ENST00000494464 RNF167Q9H6Y7 350 aa11.16□□□□□ -0.62
ERCC3-209ENST00000494464 MARCH7Q9H992 704 aa11.16□□□□□ -0.62
ERCC3-209ENST00000494464 DDX28Q9NUL7 540 aaKnown RBP11.16□□□□□ -0.62
ERCC3-209ENST00000494464 TREM2Q9NZC2 230 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms