RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-215	ENST00000492451	RASSF4	Q9H2L5	321 aa		11.65	□□□□□ -0.54
PTPN7-215	ENST00000492451	AASS	Q9UDR5	926 aa		11.65	□□□□□ -0.54
PTPN7-215	ENST00000492451	OR52A1	Q9UKL2	312 aa		11.65	□□□□□ -0.54
PTPN7-215	ENST00000492451	ANXA2P2	A6NMY6	339 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451		B4DSR2	109 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451		H0YAE9	185 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	WNT9B	O14905	357 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	RPP14	O95059	124 aa	Known RBP	11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	FSTL3	O95633	263 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	ATP6V1G2	O95670	118 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	TGFA	P01135	160 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	IGLV3-1	P01715	115 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	IGHV2-70	P01814	119 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	TTR	P02766	147 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	ZNF16	P17020	682 aa	Predicted RBP	11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	IL2RG	P31785	369 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	HSPA13	P48723	471 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	CDH15	P55291	814 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	LMO4	P61968	165 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	BTG1	P62324	171 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	ACTA2	P62736	377 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	ACTG2	P63267	376 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	ADARB1	P78563	741 aa	Known RBP	11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	ZNF85	Q03923	595 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	TMEM155	Q4W5P6	130 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	ZBTB37	Q5TC79	503 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	LIPN	Q5VXI9	398 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	FAM166A	Q6J272	317 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	MUC20	Q8N307	709 aa	Predicted RBP	11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	SPIC	Q8N5J4	248 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	SEMA6D	Q8NFY4	1073 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	ZNF420	Q8TAQ5	688 aa	Predicted RBP	11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	OR51E1	Q8TCB6	317 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451		Q8TCH9	128 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	HIST1H2AA	Q96QV6	131 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	GAL3ST1	Q99999	423 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	MICU1	Q9BPX6	476 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	ZNF665	Q9H7R5	613 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	G6PC2	Q9NQR9	355 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	GPR84	Q9NQS5	396 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	INPP5E	Q9NRR6	644 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	MRPS18A	Q9NVS2	196 aa	Known RBP	11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	GNG8	Q9UK08	70 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	RHBDD3	Q9Y3P4	386 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	HSPE1-MOB4	S4R3N1	261 aa		11.64	□□□□□ -0.55
PTPN7-215	ENST00000492451	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	11.64	□□□□□ -0.55	3e-6	■■□□□ 12.1
PTPN7-215	ENST00000492451	IGHV3-64D	A0A0J9YX35	117 aa		11.63	□□□□□ -0.55
PTPN7-215	ENST00000492451	ZNF816-ZNF321P	A0A0X1KG74	233 aa		11.63	□□□□□ -0.55
PTPN7-215	ENST00000492451	IRGM	A1A4Y4	181 aa		11.63	□□□□□ -0.55
PTPN7-215	ENST00000492451	CPT2	P23786	658 aa		11.63	□□□□□ -0.55
PTPN7-215	ENST00000492451	ACKR3	P25106	362 aa		11.63	□□□□□ -0.55
PTPN7-215	ENST00000492451	CAPG	P40121	348 aa		11.63	□□□□□ -0.55
PTPN7-215	ENST00000492451	MDH2	P40926	338 aa	Known RBP	11.63	□□□□□ -0.55
PTPN7-215	ENST00000492451	ISL1	P61371	349 aa		11.63	□□□□□ -0.55
PTPN7-215	ENST00000492451	RIPPLY1	Q0D2K3	151 aa		11.63	□□□□□ -0.55
PTPN7-215	ENST00000492451	PRDX4	Q13162	271 aa		11.63	□□□□□ -0.55
PTPN7-215	ENST00000492451	CDON	Q4KMG0	1287 aa		11.63	□□□□□ -0.55
PTPN7-215	ENST00000492451	PRAMEF6	Q5VXH4	476 aa		11.63	□□□□□ -0.55
PTPN7-215	ENST00000492451	KRT74	Q7RTS7	529 aa		11.63	□□□□□ -0.55
PTPN7-215	ENST00000492451	THAP5	Q7Z6K1	395 aa		11.63	□□□□□ -0.55
PTPN7-215	ENST00000492451	LRRC28	Q86X40	367 aa	Predicted RBP	11.63	□□□□□ -0.55
PTPN7-215	ENST00000492451	CATSPERD	Q86XM0	798 aa		11.63	□□□□□ -0.55
PTPN7-215	ENST00000492451	KLHL36	Q8N4N3	616 aa		11.63	□□□□□ -0.55
PTPN7-215	ENST00000492451	CCDC54	Q8NEL0	328 aa		11.63	□□□□□ -0.55
PTPN7-215	ENST00000492451	APH1B	Q8WW43	257 aa		11.63	□□□□□ -0.55
PTPN7-215	ENST00000492451	RORB	Q92753	470 aa		11.63	□□□□□ -0.55
PTPN7-215	ENST00000492451	FAM71F1	Q96KD3	344 aa	Predicted RBP	11.63	□□□□□ -0.55
PTPN7-215	ENST00000492451	MDFI	Q99750	246 aa		11.63	□□□□□ -0.55
PTPN7-215	ENST00000492451	ADI1	Q9BV57	179 aa		11.63	□□□□□ -0.55
PTPN7-215	ENST00000492451	RTL8A	Q9BWD3	113 aa		11.63	□□□□□ -0.55
PTPN7-215	ENST00000492451	TMEM160	Q9NX00	188 aa		11.63	□□□□□ -0.55
PTPN7-215	ENST00000492451	DCAF16	Q9NXF7	216 aa		11.63	□□□□□ -0.55
PTPN7-215	ENST00000492451	NKX1-2	Q9UD57	310 aa	Predicted RBP	11.63	□□□□□ -0.55
PTPN7-215	ENST00000492451	KCNS2	Q9ULS6	477 aa		11.63	□□□□□ -0.55
PTPN7-215	ENST00000492451	PCDHB10	Q9UN67	800 aa		11.63	□□□□□ -0.55
PTPN7-215	ENST00000492451	DHRS7C	A6NNS2	312 aa		11.62	□□□□□ -0.55
PTPN7-215	ENST00000492451	ZNF850	A8MQ14	1090 aa		11.62	□□□□□ -0.55
PTPN7-215	ENST00000492451	LMX1B	O60663	402 aa		11.62	□□□□□ -0.55
PTPN7-215	ENST00000492451	FAM20B	O75063	409 aa		11.62	□□□□□ -0.55
PTPN7-215	ENST00000492451	CRLF1	O75462	422 aa		11.62	□□□□□ -0.55
PTPN7-215	ENST00000492451	WBP4	O75554	376 aa	Known RBP	11.62	□□□□□ -0.55
PTPN7-215	ENST00000492451	DHRS3	O75911	302 aa		11.62	□□□□□ -0.55
PTPN7-215	ENST00000492451	IGHV2-5	P01817	119 aa		11.62	□□□□□ -0.55
PTPN7-215	ENST00000492451	IGHA1	P01876	353 aa		11.62	□□□□□ -0.55
PTPN7-215	ENST00000492451	GRP	P07492	148 aa		11.62	□□□□□ -0.55
PTPN7-215	ENST00000492451	PCMT1	P22061	227 aa		11.62	□□□□□ -0.55
PTPN7-215	ENST00000492451	PMEL	P40967	661 aa		11.62	□□□□□ -0.55
PTPN7-215	ENST00000492451	GALE	Q14376	348 aa		11.62	□□□□□ -0.55
PTPN7-215	ENST00000492451	ZMYND11	Q15326	602 aa		11.62	□□□□□ -0.55
PTPN7-215	ENST00000492451	MPPED2	Q15777	294 aa		11.62	□□□□□ -0.55
PTPN7-215	ENST00000492451	TP53I3	Q53FA7	332 aa		11.62	□□□□□ -0.55
PTPN7-215	ENST00000492451	DOK3	Q7L591	496 aa		11.62	□□□□□ -0.55
PTPN7-215	ENST00000492451	ZDHHC23	Q8IYP9	409 aa		11.62	□□□□□ -0.55
PTPN7-215	ENST00000492451	C8orf59	Q8N0T1	100 aa	Predicted RBP	11.62	□□□□□ -0.55
PTPN7-215	ENST00000492451	PIGC	Q92535	297 aa		11.62	□□□□□ -0.55
PTPN7-215	ENST00000492451	DVL3	Q92997	716 aa	Predicted RBP	11.62	□□□□□ -0.55
PTPN7-215	ENST00000492451	PPP1R14A	Q96A00	147 aa		11.62	□□□□□ -0.55
PTPN7-215	ENST00000492451	SOX7	Q9BT81	388 aa		11.62	□□□□□ -0.55
PTPN7-215	ENST00000492451	AMBN	Q9NP70	447 aa		11.62	□□□□□ -0.55
PTPN7-215	ENST00000492451	UFSP2	Q9NUQ7	469 aa		11.62	□□□□□ -0.55

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