RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 ADAM10O14672 748 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 RAB3DO95716 219 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 BGLAPP02818 100 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 SBK2P0C263 348 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 RD3LP0DJH9 198 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 SLC2A5P22732 501 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 S100A11P31949 105 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 GABRA2P47869 451 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 PPT1P50897 306 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 RPS27AP62979 156 aaKnown RBP3.96□□□□□ -1.78
TRA2B-215ENST00000492417 UBA52P62987 128 aaKnown RBP3.96□□□□□ -1.78
TRA2B-215ENST00000492417 LTBQ06643 244 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 TOR2AQ5JU69 321 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 SYT6Q5T7P8 510 aaPredicted RBP3.96□□□□□ -1.78
TRA2B-215ENST00000492417 GPR157Q5UAW9 335 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 LIPNQ5VXI9 398 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 Q6ZS92 163 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 BHLHA15Q7RTS1 189 aaPredicted RBP3.96□□□□□ -1.78
TRA2B-215ENST00000492417 LRRC28Q86X40 367 aaPredicted RBP3.96□□□□□ -1.78
TRA2B-215ENST00000492417 CXorf67Q86X51 503 aaPredicted RBP3.96□□□□□ -1.78
TRA2B-215ENST00000492417 ZFP82Q8N141 532 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 ARHGEF39Q8N4T4 335 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 ZNF441Q8N8Z8 693 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 ZNF680Q8NEM1 530 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 ZPLD1Q8TCW7 415 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 GIMAP1Q8WWP7 306 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 HOXB13Q92826 284 aaPredicted RBP3.96□□□□□ -1.78
TRA2B-215ENST00000492417 PIGTQ969N2 578 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 FAM46BQ96A09 425 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 SPACA5Q96QH8 159 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 PLSCR3Q9NRY6 295 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 CNOT2Q9NZN8 540 aaKnown RBP3.96□□□□□ -1.78
TRA2B-215ENST00000492417 SPRR3Q9UBC9 169 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 MOKQ9UQ07 419 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 SLC22A13Q9Y226 551 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 AK6Q9Y3D8 172 aaKnown RBP3.96□□□□□ -1.78
TRA2B-215ENST00000492417 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.96□□□□□ -1.78
TRA2B-215ENST00000492417 SLC22A23A1A5C7 686 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 TMEM8BA6NDV4 472 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 PHYHO14832 338 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 PPP1R2P9O14990 202 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 SPRY3O43610 288 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 ZNF780AO75290 641 aaPredicted RBP3.96□□□□□ -1.78
TRA2B-215ENST00000492417 HTR3BO95264 441 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 PMS2P2O95744 297 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 EPPINO95925 133 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 IFNA5P01569 189 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 MT-ND4P03905 459 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 CLPSP04118 112 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 PSMB1P20618 241 aaKnown RBP3.96□□□□□ -1.78
TRA2B-215ENST00000492417 GLP1RP43220 463 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 CX3CR1P49238 355 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 CAV3P56539 151 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 NDUFA6P56556 154 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 FBXW9Q5XUX1 488 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 H3F3CQ6NXT2 135 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 SERPINA12Q8IW75 414 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 MRPL41Q8IXM3 137 aaKnown RBP3.96□□□□□ -1.78
TRA2B-215ENST00000492417 C9orf106Q8NAJ2 232 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 PXT1Q8NFP0 134 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 OR1M1Q8NGA1 313 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 OR1J2Q8NGS2 313 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 OR2AE1Q8NHA4 323 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 ASB5Q8WWX0 329 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 ORAI1Q96D31 301 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 GMPPAQ96IJ6 420 aaPredicted RBP3.96□□□□□ -1.78
TRA2B-215ENST00000492417 ATF6BQ99941 703 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 TMUB1Q9BVT8 246 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 ADAM19Q9H013 955 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 RNF32Q9H0A6 362 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 SMCO4Q9NRQ5 59 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 MAN2C1Q9NTJ4 1040 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 DECR2Q9NUI1 292 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 TIMM8BQ9Y5J9 83 aaPredicted RBP3.96□□□□□ -1.78
TRA2B-215ENST00000492417 FLVCR1Q9Y5Y0 555 aa3.96□□□□□ -1.78
TRA2B-215ENST00000492417 A0A0D9SG52 128 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 MEX3AA1L020 520 aaKnown RBP3.95□□□□□ -1.78
TRA2B-215ENST00000492417 NPIPB9F8W1W9 429 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 K7EPK0 472 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 HSPB6O14558 160 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 SURF4O15260 269 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 IFNA1P01562 189 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 ZNF17P17021 662 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 TNFSF4P23510 183 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 CTSSP25774 331 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 CRYBA2P53672 197 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 HERV-K104P61576 105 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 SORDQ00796 357 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 EGR4Q05215 589 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 RAB40BQ12829 278 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 MESTQ5EB52 335 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 BTLAQ7Z6A9 289 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 SLC51BQ86UW2 128 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 RPRMLQ8N4K4 120 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 FAM71E2Q8N5Q1 922 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 ZSCAN4Q8NAM6 433 aaPredicted RBP3.95□□□□□ -1.78
TRA2B-215ENST00000492417 OR10Z1Q8NGY1 313 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 OR51E1Q8TCB6 317 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 MARC2Q969Z3 335 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 NKX3-1Q99801 234 aaPredicted RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms